T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame
CPU TIME:0 sec.
SCORE=58
*
BAD AVG GOOD
*
SPP00000037_1.0 : 58
GL397332.1_subs : 58
cons : 58
SPP00000037_1.0 MASEGPREPESEGIKLSADVKPFVPRFAGLNVAWLESSEACVFPS
GL397332.1_subs ---------------------------------------------
cons
SPP00000037_1.0 SAATYYPFVQEPPVTEQKIYTEDMAFGASTFPPQYLSSEITLHPY
GL397332.1_subs --------------------TEDMALGASRFSPQKLSFKIT----
cons *****:*** *.** ** :**
SPP00000037_1.0 AYSPYTLDSTQNVY---SVPGSQYLYNQPSCYRGFQTVKHRNENT
GL397332.1_subs --PPLCLLLRTRVYIHVSVPASHSDRNQPSC-QDFQMVKPRNEHL
cons .* * .** ***.*: ***** :.** ** ***:
SPP00000037_1.0 CPLPQEMKALFKKKTYDEKKTYDQQKFDSERADGTISSEIKSARG
GL397332.1_subs SSHTRNQTLIFFLKK--REKNYDEQKADRELTECCHQ---RNQQM
cons .. .:: . :* *. .:*.**:** * * :: . :. :
SPP00000037_1.0 SHH-LSIYAENSLKSDGYHKRTDRKSRIIAKNVSTSKPEFEFTTL
GL397332.1_subs AHIVCPLDAKRNLKLDGHQIRMEQTR-------------------
cons :* .: *:..** **:: * ::.
SPP00000037_1.0 DFPELQGAENNMSEIQKQPKWGPVHSVSTDISLLREVVKPAAVLS
GL397332.1_subs ------NPESWKKWLYLQTWVGIYHAGSSTASREQ----SSKRRG
cons ..*. . : *. * *: *: * : .: .
SPP00000037_1.0 KGEIVVKNNPNESVTANAA--TNSPSCTRELSWTPMGYVVRQTLS
GL397332.1_subs KTSKVIKRNRGEKSNVCACHCYRLPLRMGEL--------------
cons * . *:*.* .*. .. *. . * **
SPP00000037_1.0 TELSAAPKNVTSMINLKTI-ASSADPKNVSIPSSEALSSDPSYNK
GL397332.1_subs ---TNGLHCPKCYFHDKTKDGCFISRSNFSGSSSEVSSLDPSYNK
cons : . : .. :: ** .. . .*.* .***. * ******
SPP00000037_1.0 EKHIIHPTQKSKASQGSDLEQNEASRKNKKKKEKSTSKYEVLTVQ
GL397332.1_subs EKHSSILLNSP-KHHKVVTEQDEASEKNEKQNGPN----------
cons *** :.. : **:***.**:*:: .
SPP00000037_1.0 EPPRIEDAEEFPNLAVASERRDRIETPKFQSKQQPQDNFKNNVKK
GL397332.1_subs ---------------------------------CPKCYFHDKTKD
cons *: *:::.*.
SPP00000037_1.0 SQLPVQLDLGGMLTALEKKQHSQHAKQSSKPVVVSVGAVPVLSKE
GL397332.1_subs GCFISRSNFSGSSSEVSSLDPSYNKEKHSSILLNSPKHHKVVTEQ
cons . : : ::.* : :.. : * : :: *. :: * *::::
SPP00000037_1.0 CASGERGRRMSQMKTPHNPLDSSAPLMKKGKQREIPKAKKPTSLK
GL397332.1_subs DEASEKNEKQNGPSENMNP-DCSATKNKGWAQWLMPVIPTPATEQ
cons :.*:..: . . ** *.**. * * :* .*:: :
SPP00000037_1.0 KIILKERQERKQRLQENAVSPAFTSDDTQDGESGGDDQFPEQAEL
GL397332.1_subs DPAKKKKKNEFF---------------------------------
cons . *::::.
SPP00000037_1.0 SGPEGMDELISTPSVEDKSEEPPGTELQRDTEASHLAPNHTTFPK
GL397332.1_subs ---------------------------------------------
cons
SPP00000037_1.0 IHSRRFRDYCSQMLSKEVDACVTDLLKELVRFQDRMYQKDPVKAK
GL397332.1_subs -----------KYWEEEPDS-------AAVGFGARERERDSLKKK
cons : .:* *: * * * ::*.:* *
SPP00000037_1.0 TKRRLVLGLREVLKHLKLKKLKCVIISPNCEKIQSKGGLDDTLHT
GL397332.1_subs KKKKK----------------------------------------
cons .*::
SPP00000037_1.0 IIDYACEQNIPFVFALNRKALGRSLNKAVPVSVVGIFSYDGAQDQ
GL397332.1_subs ---------------------------------------------
cons
SPP00000037_1.0 FHKMVELTVAARQAYKTMLENVQQELVGEPRPQAPPSLPTQGPSC
GL397332.1_subs ----------------RKKRNVTMARHGGSRLSV-----------
cons .** * .* ..
SPP00000037_1.0 PAEDGPPALKEKEEPHYIEIWKKHLEAYSGCTLELEESLEASTSQ
GL397332.1_subs ---------------------------------------------
cons
SPP00000037_1.0 MMNLNL
GL397332.1_subs PRFNNL
cons **