genewise output
Score 487.43 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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SPP00000012_1.0    1 MLSATRRACQLLLLHSLFPVPRMGNSASNIVSPQEALPGRKEQTPVA   
                     MLSATRRA QLLLLHSLFPVPRMGNSASNIVSPQEALP RKEQT VA   
                     MLSATRRARQLLLLHSLFPVPRMGNSASNIVSPQEALPDRKEQTLVA   
GL397337.1:subs50000 actgacagcccccccactcgcaagatgtaagaccggtcgcagcacgg   
                     ttcccggcgattttagttctcgtgacccattgcaactcagaaacttc   
                     gcgccggtcgccccccctccgggccgcgcccccggcggcggagctag   


SPP00000012_1.0   48                           KHHVNGNRTVEPFPEGTQMAVF  
                                               KHHVNGNRTVEPFPEGTQMAVF  
                               A:A[gcc]        KHHVNGNRTVEPFPEGTQMAVF  
GL397337.1:subs50141 GGTAAGCA  Intron 1   TAGCCaccgagaaaggctcggacaggt  
                      <1-----[50142:202417-1>  aaatagagctactcagcatctt  
                                               attctccaacatcagaaggtat  


SPP00000012_1.0   71                           MGCFWGAERKFWVLKGVYSTQVG 
                                               MGCFWGAERKFW LKGVYSTQVG 
                               G:G[gga]        MGCFWGAERKFWALKGVYSTQVG 
GL397337.1:sub202486 GGTAAGAT  Intron 2   AAGGAagtttgggaattgtaggttacgg 
                      <1-----[202487:23968-1>  tggtggcagatgctagtaccatg 
                                               gctcgatagacgcgaaatatatt 


SPP00000012_1.0   95 FAGGYTSNPTYKEVCS                          KTGHAEV 
                     FAGGYTSNPTYKEVCS                          KTGHAEV 
                     FAGGYTSNPTYKEVCS          E:E[gaa]        KTGHAEV 
GL397337.1:sub239757 tgggtatacataggttGGTAGGAA  Intron 3   AAGAAaagcggg 
                     tcggaccaccaaatgc <1-----[239806:29906-1>  acgacat 
                     taacttattttaacca                          atctaat 


SPP00000012_1.0  119 VRVVYQPEHMSFEELLKVFWENHDPTQ                       
                     VRVVYQPEH+SFEELLKVFWENHDPTQ                       
                     VRVVYQPEHISFEELLKVFWENHDPTQ          G:G[ggt]     
GL397337.1:sub299088 gcggtccgcaatggccagttgacgcacGGTAGAGT  Intron 4     
                     tgttaacaatgtaattattgaaaacca <1-----[299170:317542 
                     caggcgaaccttgggcgccggtccgca                       


SPP00000012_1.0  146      MRQGNDHGTQYRSAIYPTSAKQMEAALSSKENYQK          
                          MRQGNDHGTQYRSAIYPTSAKQMEAALSSKE+YQK          
                          MRQGNDHGTQYRSAIYPTSAKQMEAALSSKEDYQK          
GL397337.1:sub317540 CAGGTaccgagcgactctgatcatgacagggcataggtca          
                     -1>  tgagaaagcaagcctaccccaatacctgcaaaaaa          
                          gtggtctctgccgcccgctcgagggcgccagccag          


SPP00000012_1.0  182                        VLSEHGFGPITTDIREGQTFYYAEDY 
                                            VLSEHGFGPITTDIRE QTFYYAEDY 
                                            VLSEHGFGPITTDIRERQTFYYAEDY 
GL397337.1:sub317650 GTAGGGT  Intron 5   CAGgctgcgtgcaaagacgccatttgggt 
                     <0-----[317650:42291-0>ttcaagtgctccatgagactaacaaa 
                                            ttagcccccctcccggagtcccgacc 


SPP00000012_1.0  208 HQQYLSKNPNGYCGLGGTGVSCPVGIKK                      
                     HQQYLSKNPNGYCGLGGTGVSCPVGIKK                      
                     HQQYLSKNPNGYCGLGGTGVSCPVGIKK                      
GL397337.1:sub422994 ccctcaaacagttgcggaggttcggaaa                      
                     aaaatgaacagaggtggcgtcgctgtaa                      
                     cggcgcgcctcccctgcccgccagttaa                      


//
Making a A in phase 1 intron
Making a G in phase 1 intron
Making a E in phase 1 intron
Making a G in phase 1 intron
>GL397337.1:subseq(8850032,473077).pep
MLSATRRARQLLLLHSLFPVPRMGNSASNIVSPQEALPDRKEQTLVAAKHHVNGNRTVEP
FPEGTQMAVFGMGCFWGAERKFWALKGVYSTQVGFAGGYTSNPTYKEVCSEKTGHAEVVR
VVYQPEHISFEELLKVFWENHDPTQGMRQGNDHGTQYRSAIYPTSAKQMEAALSSKEDYQ
KVLSEHGFGPITTDIRERQTFYYAEDYHQQYLSKNPNGYCGLGGTGVSCPVGIKK
//
>GL397337.1:subseq(8850032,473077).[50000:423077].sp
ATGCTCTCGGCCACCCGGAGGGCTCGCCAGCTCCTCCTCCTCCACAGCCTCTTTCCCGTC
CCGAGGATGGGCAACTCGGCCTCGAACATCGTCAGCCCCCAGGAGGCCTTGCCGGACCGG
AAGGAACAGACCCTTGTAGCGGCCAAACATCATGTCAATGGCAACAGAACAGTCGAACCT
TTCCCAGAGGGAACACAGATGGCTGTATTTGGAATGGGCTGTTTCTGGGGAGCTGAAAGG
AAATTCTGGGCCTTGAAAGGAGTATATTCAACTCAAGTTGGTTTTGCAGGAGGCTATACT
TCAAATCCTACTTATAAAGAAGTCTGCTCAGAAAAAACTGGCCATGCAGAAGTTGTCCGA
GTGGTGTACCAGCCAGAACACATCAGTTTTGAGGAGCTGCTCAAGGTCTTCTGGGAGAAT
CACGACCCGACCCAAGGTATGCGTCAGGGGAATGACCATGGCACTCAGTACCGCTCGGCC
ATCTACCCGACCTCTGCCAAGCAAATGGAGGCGGCCCTGAGCTCCAAAGAGGACTACCAA
AAGGTTCTTTCAGAGCACGGCTTCGGCCCCATCACTACCGACATCCGGGAGCGACAGACT
TTCTACTACGCGGAAGACTACCACCAGCAGTACCTGAGCAAGAACCCCAATGGCTACTGC
GGCCTTGGGGGCACCGGCGTGTCCTGCCCAGTGGGTATTAAAAAA
//
GL397337.1:subseq(8850032,473077)	GeneWise	match	50000	423077	487.43	+	.	GL397337.1:subseq(8850032,473077)-genewise-prediction-1
GL397337.1:subseq(8850032,473077)	GeneWise	cds	50000	50141	0.00	+	0	GL397337.1:subseq(8850032,473077)-genewise-prediction-1
GL397337.1:subseq(8850032,473077)	GeneWise	intron	50142	202417	0.00	+	.	GL397337.1:subseq(8850032,473077)-genewise-prediction-1
GL397337.1:subseq(8850032,473077)	GeneWise	cds	202418	202486	0.00	+	2	GL397337.1:subseq(8850032,473077)-genewise-prediction-1
GL397337.1:subseq(8850032,473077)	GeneWise	intron	202487	239685	0.00	+	.	GL397337.1:subseq(8850032,473077)-genewise-prediction-1
GL397337.1:subseq(8850032,473077)	GeneWise	cds	239686	239805	0.00	+	2	GL397337.1:subseq(8850032,473077)-genewise-prediction-1
GL397337.1:subseq(8850032,473077)	GeneWise	intron	239806	299064	0.00	+	.	GL397337.1:subseq(8850032,473077)-genewise-prediction-1
GL397337.1:subseq(8850032,473077)	GeneWise	cds	299065	299169	0.00	+	2	GL397337.1:subseq(8850032,473077)-genewise-prediction-1
GL397337.1:subseq(8850032,473077)	GeneWise	intron	299170	317542	0.00	+	.	GL397337.1:subseq(8850032,473077)-genewise-prediction-1
GL397337.1:subseq(8850032,473077)	GeneWise	cds	317543	317649	0.00	+	2	GL397337.1:subseq(8850032,473077)-genewise-prediction-1
GL397337.1:subseq(8850032,473077)	GeneWise	intron	317650	422915	0.00	+	.	GL397337.1:subseq(8850032,473077)-genewise-prediction-1
GL397337.1:subseq(8850032,473077)	GeneWise	cds	422916	423077	0.00	+	0	GL397337.1:subseq(8850032,473077)-genewise-prediction-1
//