genewise output
Score 67.05 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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SPP00000010_1.0   25 FYDFKAVNI-RGKLVSLEKYRGSVSLVVNVASECGFTDQHYR        
                     +YD++A+ + + + VS ++Y G   L VNVA+ CG+T Q Y         
                     IYDYEAIALNKNEYVSFKQYVGKHILFVNVATYCGLTAQ-YP        
GL397342.1:subs47598 atgtggagcaaagtgttactggacactgaggattgcagc tc        
                     taaaactctaaaaatctaaatgaattttatccaggtcca ac        
                     ctctgccattgtattccggtgcgcctcccgcccttgaga tt        


SPP00000010_1.0   66                           LQQLQRDLGPHHFNVLAFPCNQF 
                                               L  LQ +L P+ + VL FPCNQF 
                               A:E[gaa]        LNALQEELKPYGLVVLGFPCNQF 
GL397342.1:subs47721 GGTAAGAG  Intron 1   CAGAAcagccggcactgcggcgtctact 
                      <1-----[47722:49997]-1>  tactaaatacagttttgtcgaat 
                                               atacgggggcttatggctcccat 


SPP00000010_1.0   90 GQQEPDSNKEI                                       
                     G+QEP  NKEI                                       
                     GKQEPGDNKEI                                       
GL397342.1:subs50069 gacgcggaaga                                       
                     gaaacgaaaat                                       
                     agaaaatcagt                                       


//
Making a E in phase 1 intron
>GL397342.1:subseq(5693964,100101).pep
IYDYEAIALNKNEYVSFKQYVGKHILFVNVATYCGLTAQYPELNALQEELKPYGLVVLGF
PCNQFGKQEPGDNKEI
//
>GL397342.1:subseq(5693964,100101).[47598:50101].sp
ATCTATGACTATGAGGCCATCGCACTTAATAAGAATGAATATGTTTCCTTCAAGCAGTAT
GTGGGCAAGCACATCCTTTTCGTCAACGTGGCCACCTACTGTGGTCTGACAGCGCAATAT
CCTGAACTAAATGCACTCCAGGAGGAGCTGAAGCCCTATGGTCTAGTTGTGCTGGGCTTT
CCCTGCAACCAATTTGGAAAGCAAGAACCAGGAGATAACAAAGAGATT
//
GL397342.1:subseq(5693964,100101)	GeneWise	match	47598	50101	67.05	+	.	GL397342.1:subseq(5693964,100101)-genewise-prediction-1
GL397342.1:subseq(5693964,100101)	GeneWise	cds	47598	47721	0.00	+	0	GL397342.1:subseq(5693964,100101)-genewise-prediction-1
GL397342.1:subseq(5693964,100101)	GeneWise	intron	47722	49997	0.00	+	.	GL397342.1:subseq(5693964,100101)-genewise-prediction-1
GL397342.1:subseq(5693964,100101)	GeneWise	cds	49998	50101	0.00	+	2	GL397342.1:subseq(5693964,100101)-genewise-prediction-1
//