Command line: [exonerate -m p2g --showtargetgff -q SPP00000010_1.0.fa -t SPP00000010_1.0.GL397269.1/GL397269.1.subseq]
Hostname: [upf-OptiPlex-755]

C4 Alignment:
------------
         Query: SPP00000010_1.0 # Protein # Glutathione peroxidase 7 (GPx7) # Homo sapiens # Complete
        Target: GL397269.1:subseq(37559713,100146) dna:supercontig supercontig:Nleu1.0:GL397269.1:1:47109586:1 REF:[revcomp]
         Model: protein2genome:local
     Raw score: 144
   Query range: 43 -> 176
  Target range: 50146 -> 49389

    44 : ArgGlySerValSerLeuValValAsnValAlaSerGluCysGlyPheThrAspGlnHis :    63
         ||||||!.!:!!  !|||:!!! !||||||||||||   !! |||  !|||! !!:! !!
         ArgGlyLysIleLeuLeuIleGluAsnValAlaSerLeu***GlyThrThrValArgAsp
 50146 : CGGGGCAAGATACTACTTATCGAGAATGTGGCGTCCCTCTGAGGCACCACGGTCCGGGAC : 50089

    64 : TyrArgAlaLeuGlnGlnLeuGlnArgAspLeuGlyProHisHisPheAsnValLeuAla :    83
         |||! !  !:!!.!.:!!|||||||||  !|||||||||!..  !.!.   ||||||!.!
         TyrThrGlnMetAsnGluLeuGlnArgArgLeuGlyProArgGlyLeuValValLeuGly
 50088 : TACACCCAGATGAACGAGCTGCAGCGGCGCCTCGGGCCCCGGGGCCTGGTGGTGCTCGGC : 50029

    84 : PheProCysAsnGlnPheGlyGlnGln  >>>> Target Intron 1 >>>>  GluP :    94
         |||||||||||||||||||||!!.|||            361 bp           :!! 
         PheProCysAsnGlnPheGlyHisGln++                         ++LysC
 50028 : TTCCCGTGCAACCAGTTTGGGCATCAGgt.........................agAAGT : 49635

    95 : roAspSerAsnLysGluIleGluSerPheAlaArgArgThrTyrSerValSerPheProM :   114
          !!!:  !|||   ! !   ! !  !  !  !  !  !  !    !!! !:!!.!.||| 
         ysGluValAsnGlyAlaGlyAlaHisProLeuPheAlaPheLeuArgGluAlaLeuProA
 49634 : GCGAGGTGAACGGTGCGGGGGCGCACCCTCTCTTCGCCTTCCTGCGGGAGGCCCTGCCAG : 49575

   115 : etPheSerLysIleAlaValThrGlyThrGlyAlaHisProAlaPheLysTyrLeuAlaG :   134
             !||| !   !|||   |||!.!  !  !.!! !!|||  !.!!!    !! !:!!!
         laProSerAspAspAla---ThrAlaLeuMetThrAspProLysLeuIleThrTrpSerP
 49574 : CCCCCAGCGACGACGCC---ACTGCACTTATGACCGACCCCAAGCTCATCACCTGGTCTC : 49518

   135 : lnThrSerGlyLysGluProThrTrpAsnPheTrpLysTyrLeuValAlaProAspGlyL :   154
          !..!!!! !!!!.!!:  !.!!|||||||||  !|||!:!||||||!.!||||||||| 
         roValCysArgAsnAspValAlaTrpAsnPheGluLysPheLeuValGlyProAspGlyV
 49517 : CGGTGTGTCGCAACGATGTTGCCTGGAACTTTGAGAAGTTCCTGGTGGGCCCTGACGGTG : 49458

   155 : ysValValGlyAlaTrpAspProThrValSerValGluGluValArgProGlnIleThrA :   174
          !  !:!! !!  !!::..!! !  ! !!..!..!   !!::!!..!|||.!.|||  !|
         alProLeuArgArgTyrSerArgArgPheGlnThrIleAspIleGluProAspIleGluA
 49457 : TGCCCCTACGCAGGTACAGCCGCCGCTTCCAGACCATTGACATCGAGCCTGACATCGAAG : 49398

   175 : laLeuVal :   176
         |||||:!!
         laLeuLeu
 49397 : CCCTGCTC : 49390

vulgar: SPP00000010_1.0 43 176 . GL397269.1:subseq(37559713,100146) 50146 49389 - 144 M 49 147 5 0 2 I 0 357 3 0 2 M 27 81 G 1 0 M 56 168
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome:local 2.2.0
##date 2012-11-30
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
GL397269.1:subseq(37559713,100146)	exonerate:protein2genome:local	gene	49390	50146	144	-	.	gene_id 1 ; sequence SPP00000010_1.0 ; gene_orientation +
GL397269.1:subseq(37559713,100146)	exonerate:protein2genome:local	cds	50000	50146	.	-	.	
GL397269.1:subseq(37559713,100146)	exonerate:protein2genome:local	exon	50000	50146	.	-	.	insertions 0 ; deletions 0
GL397269.1:subseq(37559713,100146)	exonerate:protein2genome:local	splice5	49998	49999	.	-	.	intron_id 1 ; splice_site "GT"
GL397269.1:subseq(37559713,100146)	exonerate:protein2genome:local	intron	49639	49999	.	-	.	intron_id 1
GL397269.1:subseq(37559713,100146)	exonerate:protein2genome:local	splice3	49639	49640	.	-	.	intron_id 0 ; splice_site "AG"
GL397269.1:subseq(37559713,100146)	exonerate:protein2genome:local	cds	49390	49638	.	-	.	
GL397269.1:subseq(37559713,100146)	exonerate:protein2genome:local	exon	49390	49638	.	-	.	insertions 0 ; deletions 1
GL397269.1:subseq(37559713,100146)	exonerate:protein2genome:local	similarity	49390	50146	144	-	.	alignment_id 1 ; Query SPP00000010_1.0 ; Align 50147 44 147 ; Align 49639 93 81 ; Align 49558 121 168
# --- END OF GFF DUMP ---
#
-- completed exonerate analysis