genewise output
Score 308.27 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000009_1.0   29 KVDCNKGVTGTIYEYGALTLNGEEYIQFKQFAGKHVLFVNVAAYXGLAA 
                     ++DC+K    TIY+Y A+ LN  EY+ FKQ+ GKH+LFVNVA Y GL A 
                     QMDCHKDEKATIYDYEAIALNKNEYVSFKQYVGKHILFVNVATYCGLTA 
GL397342.1:subs76648 cagtcaggagaatgtggagcaaagtgttactggacactgaggattgcag 
                     atagaaaaacctaaaactctaaaaatctaaatgaattttatccaggtcc 
                     ggtccatgaccctctgccattgtattccggtgcgcctcccgcccttgag 


SPP00000009_1.0   78 QYP                          LNALQEELKNFGVIVLAFPC 
                     QYP                          LNALQEELK +G++VL FPC 
                     QYP          E:E[gaa]        LNALQEELKPYGLVVLGFPC 
GL397342.1:subs76795 ctcGGTAAGAG  Intron 1   CAGAAcagccggcactgcggcgtct 
                     aac <1-----[76805:79080]-1>  tactaaatacagttttgtcg 
                     att                          atacgggggcttatggctcc 


SPP00000009_1.0  102 NQFGKQEPGTNSEILLGL                          YVCPG 
                     NQFGKQEPG N EIL GL                          YV PG 
                     NQFGKQEPGDNKEILPGL           K:K[aag]       YVRPG 
GL397342.1:subs79143 actgacgcggaagaccgcAAGTAAGTG  Intron 2   TAGGtgccg 
                     aatgaaacgaaaattcgt  <2-----[79199:79625]-2> atgcg 
                     catagaaaatcagtttgc                          tctag 


SPP00000009_1.0  126 SGFVPSFQLFEKGDVNGEKEQKVFTFLK                      
                      GFVP+FQLFEKGDVNGEKEQKVF+FLK                      
                     GGFVPNFQLFEKGDVNGEKEQKVFSFLK                      
GL397342.1:subs79642 ggtgcatcctgagggaggagcagtattaGTGAGTA  Intron 3     
                     ggttcatattaagatagaaaaattgtta<0-----[79726:81268]  
                     aatattcgttgattgttaaagaccccgg                      


SPP00000009_1.0  154    NSCPPTSDLLGSSSQLFWEPMKVHDIRWNFEKFLVGPDGVPVMHWF 
                        +SCP  S++LG+   + W+P+KVHDIRWNFEKFLVGPDG+PVM W  
                        HSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMRWS 
GL397342.1:subs81266 TAGcttccctgatgatatattgcgagcgactatgatcggcggacgactt 
                     -0>acgcaccattgctactcgactataatggataatttgcagtcttggc 
                        cctttctgtgcacatacgctagctcctgctagcgggttactcgcgc 


SPP00000009_1.0  200 HQAPVSTVKSDILEYLKQFNT                             
                     H+A VS+VK+DIL YLKQF T                             
                     HRATVSSVKTDILAYLKQFKT                             
GL397342.1:subs81407 ccgagatgaagacgttactaa                             
                     agcctgctacattcataatac                             
                     cgtgccaggaccggcggacac                             


//
Making a E in phase 1 intron
Making a K in phase 2 intron
>GL397342.1:subseq(5664881,131469).pep
QMDCHKDEKATIYDYEAIALNKNEYVSFKQYVGKHILFVNVATYCGLTAQYPELNALQEE
LKPYGLVVLGFPCNQFGKQEPGDNKEILPGLKYVRPGGGFVPNFQLFEKGDVNGEKEQKV
FSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMRWSHRATVSSVK
TDILAYLKQFKT
//
>GL397342.1:subseq(5664881,131469).[76648:81469].sp
CAGATGGATTGCCACAAAGATGAGAAAGCCACCATCTATGACTATGAGGCCATCGCACTT
AATAAGAATGAATATGTTTCCTTCAAGCAGTATGTGGGCAAGCACATCCTTTTCGTCAAC
GTGGCCACCTACTGTGGTCTGACAGCGCAATATCCTGAACTAAATGCACTCCAGGAGGAG
CTGAAGCCCTATGGTCTAGTTGTGCTGGGCTTTCCCTGCAACCAATTTGGAAAGCAAGAA
CCAGGAGATAACAAAGAGATTCTTCCTGGGCTCAAGTATGTCCGTCCAGGGGGAGGATTT
GTACCTAATTTCCAGCTTTTTGAGAAAGGTGATGTGAATGGTGAAAAAGAACAGAAAGTC
TTCAGCTTCTTGAAGCACTCCTGTCCTCATCCCTCTGAGATTTTGGGCACATTCAAATCT
ATATCCTGGGACCCTGTAAAGGTCCATGACATCCGTTGGAACTTTGAAAAGTTCCTGGTG
GGGCCTGATGGAATCCCTGTCATGCGCTGGTCCCACCGGGCTACGGTCAGCTCAGTGAAG
ACAGACATCCTGGCGTACTTGAAGCAATTCAAAACC
//
GL397342.1:subseq(5664881,131469)	GeneWise	match	76648	81469	308.27	+	.	GL397342.1:subseq(5664881,131469)-genewise-prediction-1
GL397342.1:subseq(5664881,131469)	GeneWise	cds	76648	76804	0.00	+	0	GL397342.1:subseq(5664881,131469)-genewise-prediction-1
GL397342.1:subseq(5664881,131469)	GeneWise	intron	76805	79080	0.00	+	.	GL397342.1:subseq(5664881,131469)-genewise-prediction-1
GL397342.1:subseq(5664881,131469)	GeneWise	cds	79081	79198	0.00	+	2	GL397342.1:subseq(5664881,131469)-genewise-prediction-1
GL397342.1:subseq(5664881,131469)	GeneWise	intron	79199	79625	0.00	+	.	GL397342.1:subseq(5664881,131469)-genewise-prediction-1
GL397342.1:subseq(5664881,131469)	GeneWise	cds	79626	79725	0.00	+	1	GL397342.1:subseq(5664881,131469)-genewise-prediction-1
GL397342.1:subseq(5664881,131469)	GeneWise	intron	79726	81268	0.00	+	.	GL397342.1:subseq(5664881,131469)-genewise-prediction-1
GL397342.1:subseq(5664881,131469)	GeneWise	cds	81269	81469	0.00	+	0	GL397342.1:subseq(5664881,131469)-genewise-prediction-1
//