genewise output
Score 303.20 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000008_1.0    1 MTTQLRVVHLLPLLLACFVQTSPKQEKMK                     
                     M   L+   LL LLLA FV  S  QEK K                     
                     MARLLQASCLLSLLLAGFVPQSRGQEKSK                     
GL397305.1:subs43957 agccccgttcctcccggtgccacgcgataGTGAGTG  Intron 1    
                     tcgttaccgttctttcgttcagggaaaca<0-----[44044:50002] 
                     gcgggggccgccgcgccccggcgaagggg                     


SPP00000008_1.0   30    MDCHKDEKGTIYDYEAIALNKNEYVSFKQYVGKHILFVNVATYCGL 
                        MDCH     TIY+Y A+ ++  EY+ FKQY GK++LFVNVA+Y GL 
                        MDCHGGMSSTIYEYGALTIDGEEYIPFKQYAGKYVLFVNVASYXGL 
GL397305.1:subs50000 CAGagtcggaaaaatgtggcaaggggtactactggatgctgaggattgc 
                     -0>tagaggtggctaaagctctagaaatctaaacgaattttatcgaggt 
                        gccttcgcccttgcacccttgggccccggttcaccctccgcccacg 


SPP00000008_1.0   76 TAQYP                          LNALQEELKPYGLVVLGF 
                     T QY                           LNALQEEL P+GLV+LGF 
                     TGQYI          E:E[gaa]        LNALQEELAPFGLVILGF 
GL397305.1:subs50141 agctaGGTAAGAG  Intron 2   CAGAAcagccggcgctgcgacgt 
                     cgaat <1-----[50157:51546]-1>  tactaaatcctgttttgt 
                     acgct                          gtaagagtaattgctgct 


SPP00000008_1.0  100 PCNQFGKQEPGDNKEILPGL                          YVR 
                     PCNQFGKQEPG+N EILP L                          YVR 
                     PCNQFGKQEPGENSEILPTL           K:K[aag]       YVR 
GL397305.1:subs51603 ctactgacgcggatgaccacAAGTGAGTG  Intron 3   CAGGtgc 
                     cgaatgaaacgaacattcct  <2-----[51665:52079]-2> atg 
                     cccgtaagaaagcagctccc                          tca 


SPP00000008_1.0  124 PGGGFVPSFQLFEKGDVNGEKEQKVFSFLK                    
                     PGGGFVP+FQLFEKGDVNGEKEQK ++FLK                    
                     PGGGFVPNFQLFEKGDVNGEKEQKFYTFLK                    
GL397305.1:subs52090 cgggtgcatcctgagggaggagcattatca                    
                     cgggttcatattaagatagaaaaatactta                    
                     atactcttcgctgagtctagaggacctcag                    


SPP00000008_1.0  154                        HSCPHPSEILGTFKSISWDPVKVHDI 
                                            +SCP  SE+LGT   + W+P+KVHDI 
                                            NSCPPTSELLGTSDRLFWEPMKVHDI 
GL397305.1:subs52180 GTGAGTG  Intron 4   TAGattccatgccgatgccttgcaagcga 
                     <0-----[52180:52565]-0>acgccccattgccagttgactataat 
                                            ccttccggcgtatccccgacggtccc 


SPP00000008_1.0  180 RWNFEKFLVGPDGIPVMRWSHRATVSSVKTDILAYLKQ            
                     RWNFEKFLVGPDG P+MRW HR TVS+VK DIL+Y+++            
                     RWNFEKFLVGPDGTPIMRWHHRTTVSNVKMDILSYMRR            
GL397305.1:subs52644 ctatgatcggcggacaactcccaagaagaagacttaac            
                     ggataatttgcagccttggaagcctgatatattcatgg            
                     cgctggcgggattaccgcgccgcgccccggccgccggg            


//
Making a E in phase 1 intron
Making a K in phase 2 intron
>GL397305.1:subseq(18711209,102757).pep
MARLLQASCLLSLLLAGFVPQSRGQEKSKMDCHGGMSSTIYEYGALTIDGEEYIPFKQYA
GKYVLFVNVASYXGLTGQYIELNALQEELAPFGLVILGFPCNQFGKQEPGENSEILPTLK
YVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIR
WNFEKFLVGPDGTPIMRWHHRTTVSNVKMDILSYMRR
//
>GL397305.1:subseq(18711209,102757).[43957:52757].sp
ATGGCCCGGCTGCTGCAGGCGTCCTGCCTGCTCTCCCTGCTCCTGGCCGGCTTCGTCCCG
CAGAGCCGGGGACAAGAGAAGTCGAAGATGGACTGCCATGGTGGCATGAGCAGCACCATT
TATGAGTACGGAGCCCTCACCATTGATGGGGAGGAGTACATCCCCTTCAAGCAGTATGCT
GGCAAATACGTCCTCTTTGTCAACGTGGCCAGCTACTGAGGCCTGACAGGCCAGTACATT
GAACTGAATGCACTACAGGAAGAGCTTGCACCATTTGGTCTGGTCATTCTGGGCTTTCCC
TGCAACCAGTTTGGAAAACAGGAACCAGGAGAGAACTCAGAGATCCTTCCCACCCTCAAG
TATGTCCGACCAGGTGGAGGCTTTGTCCCTAATTTCCAGCTCTTTGAGAAAGGGGATGTC
AATGGAGAGAAAGAGCAGAAATTCTACACTTTCCTAAAGAACTCCTGTCCTCCCACCTCG
GAGCTCCTGGGTACATCTGACCGCCTCTTCTGGGAACCCATGAAGGTTCACGACATCCGC
TGGAACTTTGAGAAGTTCCTGGTGGGGCCAGATGGTACACCCATCATGCGCTGGCACCAC
CGGACCACGGTCAGCAACGTCAAGATGGACATCCTGTCCTACATGAGGCGG
//
GL397305.1:subseq(18711209,102757)	GeneWise	match	43957	52757	303.20	+	.	GL397305.1:subseq(18711209,102757)-genewise-prediction-1
GL397305.1:subseq(18711209,102757)	GeneWise	cds	43957	44043	0.00	+	0	GL397305.1:subseq(18711209,102757)-genewise-prediction-1
GL397305.1:subseq(18711209,102757)	GeneWise	intron	44044	50002	0.00	+	.	GL397305.1:subseq(18711209,102757)-genewise-prediction-1
GL397305.1:subseq(18711209,102757)	GeneWise	cds	50003	50156	0.00	+	0	GL397305.1:subseq(18711209,102757)-genewise-prediction-1
GL397305.1:subseq(18711209,102757)	GeneWise	intron	50157	51546	0.00	+	.	GL397305.1:subseq(18711209,102757)-genewise-prediction-1
GL397305.1:subseq(18711209,102757)	GeneWise	cds	51547	51664	0.00	+	2	GL397305.1:subseq(18711209,102757)-genewise-prediction-1
GL397305.1:subseq(18711209,102757)	GeneWise	intron	51665	52079	0.00	+	.	GL397305.1:subseq(18711209,102757)-genewise-prediction-1
GL397305.1:subseq(18711209,102757)	GeneWise	cds	52080	52179	0.00	+	1	GL397305.1:subseq(18711209,102757)-genewise-prediction-1
GL397305.1:subseq(18711209,102757)	GeneWise	intron	52180	52565	0.00	+	.	GL397305.1:subseq(18711209,102757)-genewise-prediction-1
GL397305.1:subseq(18711209,102757)	GeneWise	cds	52566	52757	0.00	+	0	GL397305.1:subseq(18711209,102757)-genewise-prediction-1
//