genewise output
Score 56.96 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000008_1.0   65 LFVNVATYCGLT-AQYPELNALQEELKPYGLVVLGFPCNQFGKQEPGDN 
                     L VNVA+ C LT   Y  L  L +E  P    VL FPCNQFG+ EP  + 
                     LVVNVASDCQLTDRNYLALKELHKEFGPSHFSVLAFPCNQFGESEPRPS 
GL397303.1:subs50000 cggaggagtccagaattgcagccagtgctctagtgtctactggtgccca 
                     tttatcgagatcagaatctaataaatgccatgttctcgaatgacacgcg 
                     atacgctccacacatcagggagcagtaaccccggttcctgtaaggccac 


SPP00000008_1.0  113 KEILPGLKYVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFL--KH-SCPH 
                     KE+     + R   G    F +F K  + G + +  F FL  K+  C + 
                     KEVE---SFARKNYGV--TFPIFHKIKILGSEGEPAFRFLVGKYLPCIY 
GL397303.1:subs50147 aggg   ttgaaatgg  atcatcaaaacgtgggcgtatcggatcctat 
                     aata   ctcgaaagt  ctcttaatattgcagacctgtttgaatcgta 
                     gaaa   ttaaaccaa  acccccgtgtaataaatatattttatgtcat 


SPP00000008_1.0  159 PSEILGTFKSISWD                          VKVHDIRWN 
                       ++L  FK +  D                              + RWN 
                     CFKLLLIFKQLYQD          P:N[aat]        SSKKEPRWN 
GL397303.1:subs50279 ttatccatacttcgAGTACTTT  Intron 1   TAGATttaagcata 
                     gtatttttaataaa <1-----[50322:53040]-1>  ccaaacgga 
                     ttagtcttaaacgc                          taggaaggt 


SPP00000008_1.0  183 FEKFLVGPDGIPVMRWSHRATVSSVKTDILAYLKQ               
                     F K+LV P+G  V  W     +  ++ DI A ++Q               
                     FWKYLVNPEGQVVKFWRPEEPIEVIRPDIAALVRQ               
GL397303.1:subs53070 ttatcgacggcggattacggcaggaacgaggcgac               
                     tgaattacagattatggcaactattgcatccttga               
                     tggttcctgtatggcggaggttaccgtcaatgtaa               


//
Making a N in phase 1 intron
>GL397303.1:subseq(189267,100320).pep
LVVNVASDCQLTDRNYLALKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESFARKNY
GVTFPIFHKIKILGSEGEPAFRFLVGKYLPCIYCFKLLLIFKQLYQDNSSKKEPRWNFWK
YLVNPEGQVVKFWRPEEPIEVIRPDIAALVRQ
//
>GL397303.1:subseq(189267,100320).[50000:53174].sp
CTAGTTGTAAACGTGGCCAGTGACTGCCAACTCACAGACAGAAATTACTTAGCGCTGAAG
GAACTGCACAAAGAGTTTGGACCATCCCACTTCAGCGTGTTGGCTTTTCCCTGCAATCAG
TTTGGAGAATCGGAGCCCCGCCCAAGCAAGGAAGTAGAATCTTTTGCAAGAAAAAACTAC
GGAGTAACATTCCCCATCTTCCACAAGATTAAGATTCTAGGATCTGAAGGAGAACCTGCA
TTTAGATTTCTTGTTGGTAAATATCTGCCTTGCATATATTGTTTTAAATTGCTTCTCATT
TTTAAACAATTATACCAGGACAATTCTTCAAAGAAGGAACCAAGGTGGAATTTTTGGAAG
TATCTTGTCAACCCTGAGGGTCAAGTTGTGAAGTTCTGGAGGCCAGAGGAGCCTATTGAA
GTCATCAGGCCTGACATAGCAGCTCTGGTTAGACAA
//
GL397303.1:subseq(189267,100320)	GeneWise	match	50000	53174	60.95	+	.	GL397303.1:subseq(189267,100320)-genewise-prediction-1
GL397303.1:subseq(189267,100320)	GeneWise	cds	50000	50321	0.00	+	0	GL397303.1:subseq(189267,100320)-genewise-prediction-1
GL397303.1:subseq(189267,100320)	GeneWise	intron	50322	53040	0.00	+	.	GL397303.1:subseq(189267,100320)-genewise-prediction-1
GL397303.1:subseq(189267,100320)	GeneWise	cds	53041	53174	0.00	+	2	GL397303.1:subseq(189267,100320)-genewise-prediction-1
//