genewise output
Score 321.65 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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SPP00000006_1.0    1 MARLLQASCLLSLLLAGFVSQSRGQEKSK                     
                     M   L+   LL LLLA FV  S  QEK K                     
                     MTTQLRVIYLLPLLLACFVQTSAKQEKMK                     
GL397342.1:subs73279 aaactagatccccccgttgcaagacgaaaGTGAGTG  Intron 1    
                     tccatgttattctttcgttacgcaaaata<0-----[73366:76638] 
                     gtagagcctgtctcacctaaatcgggggg                     


SPP00000006_1.0   30    MDCHGGISGTIYEYGALTIDGEEYIPFKQYAGKYVLFVNVASYXGL 
                        MDCH     TIY+Y A+ ++  EY+ FKQY GK++LFVNVA+Y GL 
                        MDCHKDEKATIYDYEAIALNKNEYVSFKQYVGKHILFVNVATYCGL 
GL397342.1:subs76636 CAGagtcaggagaatgtggagcaaagtgttactggacactgaggattgc 
                     -0>tagaaaaacctaaaactctaaaaatctaaatgaattttatccaggt 
                        gtccatgaccctctgccattgtattccggtgcgcctcccgcccttg 


SPP00000006_1.0   76 TGQYI                          LNALQEELAPFGLVILGF 
                     T QY                           LNALQEEL P+GLV+LGF 
                     TAQYP          E:E[gaa]        LNALQEELKPYGLVVLGF 
GL397342.1:subs76777 agctcGGTAAGAG  Intron 2   CAGAAcagccggcactgcggcgt 
                     ccaac <1-----[76793:79068]-1>  tactaaatacagttttgt 
                     agatt                          atacgggggcttatggct 


SPP00000006_1.0  100 PCNQFGKQEPGENSEILPTL                          YVR 
                     PCNQFGKQEPG+N EILP L                          YVR 
                     PCNQFGKQEPGDNKEILPGL           K:K[aag]       YVR 
GL397342.1:subs79125 ctactgacgcggaagaccgcAAGTAAGTG  Intron 3   TAGGtgc 
                     cgaatgaaacgaaaattcgt  <2-----[79187:79613]-2> atg 
                     cccatagaaaatcagtttgc                          tct 


SPP00000006_1.0  124 PGGGFVPNFQLFEKGDVNGEKEQKFYTFLK                    
                     PGGGFVPNFQLFEKGDVNGEKEQK ++FLK                    
                     PGGGFVPNFQLFEKGDVNGEKEQKVFSFLK                    
GL397342.1:subs79624 cgggtgcatcctgagggaggagcagtatta                    
                     cgggttcatattaagatagaaaaattgtta                    
                     agaatattcgttgattgttaaagaccccgg                    


SPP00000006_1.0  154                        NSCPPTSELLGTSDRLFWEPMKVHDI 
                                            +SCP  SE+LGT   + W+P+KVHDI 
                                            HSCPHPSEILGTFKSISWDPVKVHDI 
GL397342.1:subs79714 GTGAGTA  Intron 4   TAGcttccctgatgatatattgcgagcga 
                     <0-----[79714:81256]-0>acgcaccattgctactcgactataat 
                                            cctttctgtgcacatacgctagctcc 


SPP00000006_1.0  180 RWNFEKFLVGPDGIPIMRWHHRTTVSNVKMDILSYMRR            
                     RWNFEKFLVGPDGIP+MRW HR TVS+VK DIL+Y+++            
                     RWNFEKFLVGPDGIPVMRWSHRATVSSVKTDILAYLKQ            
GL397342.1:subs81335 ctatgatcggcggacgacttccgagatgaagacgttac            
                     ggataatttgcagtcttggcagcctgctacattcataa            
                     tgctagcgggttactcgcgccgtgccaggaccggcgga            


//
Making a E in phase 1 intron
Making a K in phase 2 intron
>GL397342.1:subseq(5664893,131448).pep
MTTQLRVIYLLPLLLACFVQTSAKQEKMKMDCHKDEKATIYDYEAIALNKNEYVSFKQYV
GKHILFVNVATYCGLTAQYPELNALQEELKPYGLVVLGFPCNQFGKQEPGDNKEILPGLK
YVRPGGGFVPNFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIR
WNFEKFLVGPDGIPVMRWSHRATVSSVKTDILAYLKQ
//
>GL397342.1:subseq(5664893,131448).[73279:81448].sp
ATGACTACACAGTTAAGGGTCATCTATCTGCTTCCCCTTCTCCTAGCCTGCTTTGTACAA
ACAAGTGCCAAGCAGGAGAAGATGAAGATGGATTGCCACAAAGATGAGAAAGCCACCATC
TATGACTATGAGGCCATCGCACTTAATAAGAATGAATATGTTTCCTTCAAGCAGTATGTG
GGCAAGCACATCCTTTTCGTCAACGTGGCCACCTACTGTGGTCTGACAGCGCAATATCCT
GAACTAAATGCACTCCAGGAGGAGCTGAAGCCCTATGGTCTAGTTGTGCTGGGCTTTCCC
TGCAACCAATTTGGAAAGCAAGAACCAGGAGATAACAAAGAGATTCTTCCTGGGCTCAAG
TATGTCCGTCCAGGGGGAGGATTTGTACCTAATTTCCAGCTTTTTGAGAAAGGTGATGTG
AATGGTGAAAAAGAACAGAAAGTCTTCAGCTTCTTGAAGCACTCCTGTCCTCATCCCTCT
GAGATTTTGGGCACATTCAAATCTATATCCTGGGACCCTGTAAAGGTCCATGACATCCGT
TGGAACTTTGAAAAGTTCCTGGTGGGGCCTGATGGAATCCCTGTCATGCGCTGGTCCCAC
CGGGCTACGGTCAGCTCAGTGAAGACAGACATCCTGGCGTACTTGAAGCAA
//
GL397342.1:subseq(5664893,131448)	GeneWise	match	73279	81448	321.65	+	.	GL397342.1:subseq(5664893,131448)-genewise-prediction-1
GL397342.1:subseq(5664893,131448)	GeneWise	cds	73279	73365	0.00	+	0	GL397342.1:subseq(5664893,131448)-genewise-prediction-1
GL397342.1:subseq(5664893,131448)	GeneWise	intron	73366	76638	0.00	+	.	GL397342.1:subseq(5664893,131448)-genewise-prediction-1
GL397342.1:subseq(5664893,131448)	GeneWise	cds	76639	76792	0.00	+	0	GL397342.1:subseq(5664893,131448)-genewise-prediction-1
GL397342.1:subseq(5664893,131448)	GeneWise	intron	76793	79068	0.00	+	.	GL397342.1:subseq(5664893,131448)-genewise-prediction-1
GL397342.1:subseq(5664893,131448)	GeneWise	cds	79069	79186	0.00	+	2	GL397342.1:subseq(5664893,131448)-genewise-prediction-1
GL397342.1:subseq(5664893,131448)	GeneWise	intron	79187	79613	0.00	+	.	GL397342.1:subseq(5664893,131448)-genewise-prediction-1
GL397342.1:subseq(5664893,131448)	GeneWise	cds	79614	79713	0.00	+	1	GL397342.1:subseq(5664893,131448)-genewise-prediction-1
GL397342.1:subseq(5664893,131448)	GeneWise	intron	79714	81256	0.00	+	.	GL397342.1:subseq(5664893,131448)-genewise-prediction-1
GL397342.1:subseq(5664893,131448)	GeneWise	cds	81257	81448	0.00	+	0	GL397342.1:subseq(5664893,131448)-genewise-prediction-1
//