genewise output
Score 123.17 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000005_1.0    7 SFYDLSAISLD-GEKVDFNTFRGRAVLIENVASLXGTTTRDFT       
                     ++YD  AI+L+  E V F  + G+ +L+ NVA+  G T + +        
                     TIYDYEAIALNKNEYVSFKQYVGKHILFVNVATYCGLTAQ-YP       
GL397342.1:subs76663 aatgtggagcaaagtgttactggacactgaggattgcagc tc       
                     ctaaaactctaaaaatctaaatgaattttatccaggtcca ac       
                     cctctgccattgtattccggtgcgcctcccgcccttgaga tt       


SPP00000005_1.0   49                           LNELQCRF-PRRLVVLGFPCNQF 
                                               LN LQ  + P  LVVLGFPCNQF 
                               Q:E[gaa]        LNALQEELKPYGLVVLGFPCNQF 
GL397342.1:subs76789 GGTAAGAG  Intron 1   CAGAAcagccggcactgcggcgtctact 
                      <1-----[76790:79065]-1>  tactaaatacagttttgtcgaat 
                                               atacgggggcttatggctcccat 


SPP00000005_1.0   72 GHQENCQNEEILNSL                          YVRPGGGY 
                     G QE   N+EIL  L                          YVRPGGG+ 
                     GKQEPGDNKEILPGL           K:K[aag]       YVRPGGGF 
GL397342.1:subs79137 gacgcggaagaccgcAAGTAAGTG  Intron 2   TAGGtgccgggt 
                     gaaacgaaaattcgt  <2-----[79184:79610]-2> atgcgggt 
                     agaaaatcagtttgc                          tctagaat 


SPP00000005_1.0   96 QPTFTLVQKCEVNGQNEHPVFAYLK                       D 
                      P F L +K +VNG+ E  VF++LK                         
                     VPNFQLFEKGDVNGEKEQKVFSFLK                       H 
GL397342.1:subs79636 gcatcctgagggaggagcagtattaGTGAGTA  Intron 3   TAGc 
                     tcatattaagatagaaaaattgtta<0-----[79711:81253]-0>a 
                     attcgttgattgttaaagaccccgg                       c 


SPP00000005_1.0  122 KLPYPYDDPFSLMTDPKLIIWSPVRRSDVAWNFEKFLIGPEGEPFRRYS 
                       P+P +    ++   K I W PV+  D+ WNFEKFL+GP+G P  R+S 
                     SCPHPSE----ILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMRWS 
GL397342.1:subs81257 ttccctg    atgatatattgcgagcgactatgatcggcggacgactt 
                     cgcacca    ttgctactcgactataatggataatttgcagtcttggc 
                     ctttctg    tgcacatacgctagctcctgctagcgggttactcgcgc 


SPP00000005_1.0  171 RTFPTINIEPDIKRLLK                                 
                           +++ DI   LK                                 
                     HRATVSSVKTDILAYLK                                 
GL397342.1:subs81392 ccgagatgaagacgtta                                 
                     agcctgctacattcata                                 
                     cgtgccaggaccggcgg                                 


//
Making a E in phase 1 intron
Making a K in phase 2 intron
>GL397342.1:subseq(5664896,131442).pep
TIYDYEAIALNKNEYVSFKQYVGKHILFVNVATYCGLTAQYPELNALQEELKPYGLVVLG
FPCNQFGKQEPGDNKEILPGLKYVRPGGGFVPNFQLFEKGDVNGEKEQKVFSFLKHSCPH
PSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMRWSHRATVSSVKTDILAYLK
//
>GL397342.1:subseq(5664896,131442).[76663:81442].sp
ACCATCTATGACTATGAGGCCATCGCACTTAATAAGAATGAATATGTTTCCTTCAAGCAG
TATGTGGGCAAGCACATCCTTTTCGTCAACGTGGCCACCTACTGTGGTCTGACAGCGCAA
TATCCTGAACTAAATGCACTCCAGGAGGAGCTGAAGCCCTATGGTCTAGTTGTGCTGGGC
TTTCCCTGCAACCAATTTGGAAAGCAAGAACCAGGAGATAACAAAGAGATTCTTCCTGGG
CTCAAGTATGTCCGTCCAGGGGGAGGATTTGTACCTAATTTCCAGCTTTTTGAGAAAGGT
GATGTGAATGGTGAAAAAGAACAGAAAGTCTTCAGCTTCTTGAAGCACTCCTGTCCTCAT
CCCTCTGAGATTTTGGGCACATTCAAATCTATATCCTGGGACCCTGTAAAGGTCCATGAC
ATCCGTTGGAACTTTGAAAAGTTCCTGGTGGGGCCTGATGGAATCCCTGTCATGCGCTGG
TCCCACCGGGCTACGGTCAGCTCAGTGAAGACAGACATCCTGGCGTACTTGAAG
//
GL397342.1:subseq(5664896,131442)	GeneWise	match	76663	81442	126.17	+	.	GL397342.1:subseq(5664896,131442)-genewise-prediction-1
GL397342.1:subseq(5664896,131442)	GeneWise	cds	76663	76789	0.00	+	0	GL397342.1:subseq(5664896,131442)-genewise-prediction-1
GL397342.1:subseq(5664896,131442)	GeneWise	intron	76790	79065	0.00	+	.	GL397342.1:subseq(5664896,131442)-genewise-prediction-1
GL397342.1:subseq(5664896,131442)	GeneWise	cds	79066	79183	0.00	+	2	GL397342.1:subseq(5664896,131442)-genewise-prediction-1
GL397342.1:subseq(5664896,131442)	GeneWise	intron	79184	79610	0.00	+	.	GL397342.1:subseq(5664896,131442)-genewise-prediction-1
GL397342.1:subseq(5664896,131442)	GeneWise	cds	79611	79710	0.00	+	1	GL397342.1:subseq(5664896,131442)-genewise-prediction-1
GL397342.1:subseq(5664896,131442)	GeneWise	intron	79711	81253	0.00	+	.	GL397342.1:subseq(5664896,131442)-genewise-prediction-1
GL397342.1:subseq(5664896,131442)	GeneWise	cds	81254	81442	0.00	+	0	GL397342.1:subseq(5664896,131442)-genewise-prediction-1
//