genewise output
Score 47.76 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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SPP00000005_1.0   32 LIENVASLXGTTTRDFTQLNELQCRF-PRRLVVLGFPCNQFGHQENCQN 
                     L+ NVAS    T R++  L EL   F P    VL FPCNQFG  E   + 
                     LVVNVASDCQLTDRNYLALKELHKEFGPSHFSVLAFPCNQFGESEPRPS 
GL397303.1:subs50000 cggaggagtccagaattgcagccagtgctctagtgtctactggtgccca 
                     tttatcgagatcagaatctaataaatgccatgttctcgaatgacacgcg 
                     atacgctccacacatcagggagcagtaaccccggttcctgtaaggccac 


SPP00000005_1.0   80 EEILNSLKYVRPGGGYQPTFTLVQKCEVNGQNEHPVFAYLKDK-LPYPY 
                     +E+ +   + R    Y  TF +  K ++ G    P F +L  K LP  Y 
                     KEVES---FARKN--YGVTFPIFHKIKILGSEGEPAFRFLVGKYLPCIY 
GL397303.1:subs50147 agggt   tgaaa  tggatcatcaaaacgtgggcgtatcggatcctat 
                     aatac   tcgaa  agtctcttaatattgcagacctgtttgaatcgta 
                     gaaat   taaac  caaacccccgtgtaataaatatattttatgtcat 


SPP00000005_1.0  128 DDPFSLMTDPKLIIWS                          VRRSDVA 
                        F L+   K +                               + +   
                     C--FKLLLIFKQLYQD          P:N[aat]        SSKKEPR 
GL397303.1:subs50279 t  tatccatacttcgAGTACTTT  Intron 1   TAGATttaagca 
                     g  tatttttaataaa <1-----[50322:53040]-1>  ccaaacg 
                     t  tagtcttaaacgc                          taggaag 


SPP00000005_1.0  152 WNFEKFLIGPEGEPFRRYSRTFPTINIEPDIKRLLKVAI           
                     WNF K+L+ PEG+  + +    P   I PDI  L++  I           
                     WNFWKYLVNPEGQVVKFWRPEEPIEVIRPDIAALVRQVI           
GL397303.1:subs53064 tattatcgacggcggattacggcaggaacgaggcgacga           
                     gatgaattacagattatggcaactattgcatccttgatt           
                     gttggttcctgtatggcggaggttaccgtcaatgtaagc           


//
Making a N in phase 1 intron
>GL397303.1:subseq(189267,100278).pep
LVVNVASDCQLTDRNYLALKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESFARKNY
GVTFPIFHKIKILGSEGEPAFRFLVGKYLPCIYCFKLLLIFKQLYQDNSSKKEPRWNFWK
YLVNPEGQVVKFWRPEEPIEVIRPDIAALVRQVI
//
>GL397303.1:subseq(189267,100278).[50000:53180].sp
CTAGTTGTAAACGTGGCCAGTGACTGCCAACTCACAGACAGAAATTACTTAGCGCTGAAG
GAACTGCACAAAGAGTTTGGACCATCCCACTTCAGCGTGTTGGCTTTTCCCTGCAATCAG
TTTGGAGAATCGGAGCCCCGCCCAAGCAAGGAAGTAGAATCTTTTGCAAGAAAAAACTAC
GGAGTAACATTCCCCATCTTCCACAAGATTAAGATTCTAGGATCTGAAGGAGAACCTGCA
TTTAGATTTCTTGTTGGTAAATATCTGCCTTGCATATATTGTTTTAAATTGCTTCTCATT
TTTAAACAATTATACCAGGACAATTCTTCAAAGAAGGAACCAAGGTGGAATTTTTGGAAG
TATCTTGTCAACCCTGAGGGTCAAGTTGTGAAGTTCTGGAGGCCAGAGGAGCCTATTGAA
GTCATCAGGCCTGACATAGCAGCTCTGGTTAGACAAGTGATC
//
GL397303.1:subseq(189267,100278)	GeneWise	match	50000	53180	51.75	+	.	GL397303.1:subseq(189267,100278)-genewise-prediction-1
GL397303.1:subseq(189267,100278)	GeneWise	cds	50000	50321	0.00	+	0	GL397303.1:subseq(189267,100278)-genewise-prediction-1
GL397303.1:subseq(189267,100278)	GeneWise	intron	50322	53040	0.00	+	.	GL397303.1:subseq(189267,100278)-genewise-prediction-1
GL397303.1:subseq(189267,100278)	GeneWise	cds	53041	53180	0.00	+	2	GL397303.1:subseq(189267,100278)-genewise-prediction-1
//