Command line: [exonerate -m p2g --showtargetgff -q SPP00000004_1.0.fa -t SPP00000004_1.0.GL397303.1/GL397303.1.subseq]
Hostname: [upf-OptiPlex-755]

C4 Alignment:
------------
         Query: SPP00000004_1.0 # Protein # Glutathione peroxidase 1 (GPx1) # Homo sapiens # Complete
        Target: GL397303.1:subseq(189258,100260) dna:supercontig supercontig:Nleu1.0:GL397303.1:1:20711136:1 REF
         Model: protein2genome:local
     Raw score: 115
   Query range: 37 -> 92
  Target range: 49999 -> 50164

    38 : LysValLeuLeuIleGluAsnValAlaSerLeuUnkGlyThrThrValArgAspTyrThr :    57
         :!!|||! !|||:!!! !||||||||||||  !     !  !|||! !|||:!!|||  !
         GluValSerLeuValValAsnValAlaSerAspCysGlnLeuThrAspArgAsnTyrLeu
 50000 : GAGGTTTCACTAGTTGTAAACGTGGCCAGTGACTGCCAACTCACAGACAGAAATTACTTA : 50057

    58 : GlnMetAsnGluLeuGlnArgArgLeuGlyProArgGlyLeuValValLeuGlyPhePro :    77
           !:!!!!.||||||!!.!:!..!!!!||||||  !  !!!!  !||||||!.!||||||
         AlaLeuLysGluLeuHisLysGluPheGlyProSerHisPheSerValLeuAlaPhePro
 50058 : GCGCTGAAGGAACTGCACAAAGAGTTTGGACCATCCCACTTCAGCGTGTTGGCTTTTCCC : 50117

    78 : CysAsnGlnPheGlyHisGlnGluAsnAlaLysAsnGluGluIle :    92
         |||||||||||||||.!...!|||  !  !  !!:!:!!|||:!!
         CysAsnGlnPheGlyGluSerGluProArgProSerLysGluVal
 50118 : TGCAATCAGTTTGGAGAATCGGAGCCCCGCCCAAGCAAGGAAGTA : 50164

vulgar: SPP00000004_1.0 37 92 . GL397303.1:subseq(189258,100260) 49999 50164 + 115 M 55 165
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome:local 2.2.0
##date 2012-11-29
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
GL397303.1:subseq(189258,100260)	exonerate:protein2genome:local	gene	50000	50164	115	+	.	gene_id 1 ; sequence SPP00000004_1.0 ; gene_orientation .
GL397303.1:subseq(189258,100260)	exonerate:protein2genome:local	cds	50000	50164	.	+	.	
GL397303.1:subseq(189258,100260)	exonerate:protein2genome:local	exon	50000	50164	.	+	.	insertions 0 ; deletions 0
GL397303.1:subseq(189258,100260)	exonerate:protein2genome:local	similarity	50000	50164	115	+	.	alignment_id 1 ; Query SPP00000004_1.0 ; Align 50000 38 165
# --- END OF GFF DUMP ---
#
-- completed exonerate analysis