genewise output
Score 437.29 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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SPP00000026_1.0    1 MSFLQDPSFFTMGMWSIGAGALGAAALALLLANTDVFLSKPQKAALEYL 
                     MSFLQDPSFFTMGMWSIGAGALGAAALALLLANTDVFLSK QKA LEYL 
                     MSFLQDPSFFTMGMWSIGAGALGAAALALLLANTDVFLSKSQKATLEYL 
GL192914.1:subs 4075 attccgcattaagattaggggcggggtgcccgaaggtctatcagacgtc 
                     tcttaacgttctgtgctgcgctgccctctttcacatttcacaacctaat 
                     gtccgtgtcccggggcctggcggatcgcgcgccacgtgcgcgaggggtg 


SPP00000026_1.0   50 EDIDLKTLEK                          PRTFKAKELWEKN 
                     EDIDLKTLEK                          PRTFKAKELWEKN 
                     EDIDLKTLEK          E:E[gaa]        PRTFKAKELWEKN 
GL192914.1:subs 4222 ggagcaacgaGGTAAGCA  Intron 1   CAGAAcaatagagctgaa 
                     aatatactaa <1-----[4253 : 6133]-1>  cgctacaatgaaa 
                     gcacgacggg                          agtcaaggcgagt 


SPP00000026_1.0   74 GAVIMAVRRPGCFLCRE                       EAADLSSLK 
                     GAVIMAVRRPGCFLCRE                       EAADLSSLK 
                     GAVIMAVRRPGCFLCRE                       EAADLSSLK 
GL192914.1:subs 6175 gggaaggcacgttctcgGTGAGTA  Intron 2   CAGggggcttca 
                     gctttctggcggttgga<0-----[6226 : 9222]-0>accatccta 
                     atgtgtgcgtctcccag                       gtccgccgg 


SPP00000026_1.0  100 SMLDQLGVPLYAVVKEHIRTEVKDFQPYFKGEIFLDEK            
                       LD+LGVPLYAVVKE IRTEV+DFQPYFKGEIFLDEK            
                     PKLDELGVPLYAVVKEQIRTEVQDFQPYFKGEIFLDEK            
GL192914.1:subs 9250 cacggcggcctgggagcaaaggcgtccttaggatcgga            
                     cataatgtctacttaaatgcataatacatagatttaaa            
                     cggcggaccgtagggaacgcaggccgttcaaaccgtag            


SPP00000026_1.0  138                        KKFYGPQRRKMMFMGFIRLGVWYNFF 
                                            KKFYGPQRRKMMFMGF+RLGVWYNFF 
                                            KKFYGPQRRKMMFMGFVRLGVWYNFF 
GL192914.1:subs 9364 GTGCATC  Intron 3   CAGaattgccacaaatagtgccggttatt 
                     <0-----[9364 :10014]-0>aatagcaggattttgttgtgtgaatt 
                                            agcctcagggggtgatctgttgcccc 


SPP00000026_1.0  164 RAWNGGFSGNLEGEGFILGGVFVVGSGKQ                     
                     RA NGGFSGNLEGEGFILGGVFVVGSGKQ                     
                     RARNGGFSGNLEGEGFILGGVFVVGSGKQ                     
GL192914.1:subs10093 cgcaggttgacggggtacgggtgggtgacGTAAATT  Intron 4    
                     gcgaggtcgatagagtttggttttgcgaa<0-----[10180:13164] 
                     gcgcacttacgacaccctgattggaaagg                     


SPP00000026_1.0  193    GILLEHREKEFGDKVNLLSVLEAAKMIKPQTLASEKK          
                        GILLEHREKEFGDKVN +SVLEAA+ I+PQT A+E K          
                        GILLEHREKEFGDKVNPVSVLEAARKIQPQTSAAETK          
GL192914.1:subs13162 TAGgaccgccgagtggagacgtgcgggaaacccatgggaa          
                     -0>gtttaagaaatgaatactcttaccgatacaccccaca          
                        cttcgtgaaatacagcatttgattggcacgtacagag          


//
Making a E in phase 1 intron
>GL192914.1:subseq(1068998,20179).pep
MSFLQDPSFFTMGMWSIGAGALGAAALALLLANTDVFLSKSQKATLEYLEDIDLKTLEKE
PRTFKAKELWEKNGAVIMAVRRPGCFLCREEAADLSSLKPKLDELGVPLYAVVKEQIRTE
VQDFQPYFKGEIFLDEKKKFYGPQRRKMMFMGFVRLGVWYNFFRARNGGFSGNLEGEGFI
LGGVFVVGSGKQGILLEHREKEFGDKVNPVSVLEAARKIQPQTSAAETK
//
>GL192914.1:subseq(1068998,20179).[4075:13275].sp
ATGTCTTTCCTCCAGGATCCGAGTTTCTTCACCATGGGGATGTGGTCCATCGGTGCGGGG
GCCCTGGGGGCAGCTGCCTTGGCCCTGCTCCTGGCCAACACAGACGTGTTTCTGTCCAAG
TCCCAGAAAGCGACGCTGGAGTATCTGGAGGACATAGACCTGAAAACCCTGGAGAAGGAA
CCAAGGACTTTCAAAGCAAAGGAGCTCTGGGAAAAGAATGGAGCTGTGATTATGGCTGTG
CGCAGGCCTGGCTGTTTCCTCTGCCGAGAGGAGGCTGCCGACCTGTCCTCCCTGAAGCCC
AAGCTGGACGAGCTGGGAGTCCCCCTGTATGCAGTGGTGAAGGAACAAATCAGGACCGAA
GTGCAGGACTTCCAGCCTTATTTCAAAGGAGAAATCTTCCTGGATGAAAAGAAAAAGTTC
TACGGTCCCCAAAGGCGGAAGATGATGTTTATGGGATTTGTCCGTCTGGGTGTTTGGTAC
AACTTCTTCCGGGCCCGGAACGGAGGCTTTTCTGGAAACCTGGAAGGCGAAGGCTTCATC
CTTGGGGGAGTTTTTGTGGTGGGATCAGGAAAGCAGGGCATTCTTCTCGAGCATCGGGAA
AAAGAATTTGGAGACAAAGTGAACCCAGTTTCTGTTCTGGAAGCTGCTAGGAAGATCCAA
CCCCAGACTTCAGCCGCAGAGACAAAG
//
GL192914.1:subseq(1068998,20179)	GeneWise	match	4075	13275	437.29	+	.	GL192914.1:subseq(1068998,20179)-genewise-prediction-1
GL192914.1:subseq(1068998,20179)	GeneWise	cds	4075	4252	0.00	+	0	GL192914.1:subseq(1068998,20179)-genewise-prediction-1
GL192914.1:subseq(1068998,20179)	GeneWise	intron	4253	6133	0.00	+	.	GL192914.1:subseq(1068998,20179)-genewise-prediction-1
GL192914.1:subseq(1068998,20179)	GeneWise	cds	6134	6225	0.00	+	2	GL192914.1:subseq(1068998,20179)-genewise-prediction-1
GL192914.1:subseq(1068998,20179)	GeneWise	intron	6226	9222	0.00	+	.	GL192914.1:subseq(1068998,20179)-genewise-prediction-1
GL192914.1:subseq(1068998,20179)	GeneWise	cds	9223	9363	0.00	+	0	GL192914.1:subseq(1068998,20179)-genewise-prediction-1
GL192914.1:subseq(1068998,20179)	GeneWise	intron	9364	10014	0.00	+	.	GL192914.1:subseq(1068998,20179)-genewise-prediction-1
GL192914.1:subseq(1068998,20179)	GeneWise	cds	10015	10179	0.00	+	0	GL192914.1:subseq(1068998,20179)-genewise-prediction-1
GL192914.1:subseq(1068998,20179)	GeneWise	intron	10180	13164	0.00	+	.	GL192914.1:subseq(1068998,20179)-genewise-prediction-1
GL192914.1:subseq(1068998,20179)	GeneWise	cds	13165	13275	0.00	+	0	GL192914.1:subseq(1068998,20179)-genewise-prediction-1
//