Find start end points: [28,38408][219,44903] Score 128425
Recovering alignment: Alignment recovered] Explicit read offe 71%

genewise output
Score 370.56 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

Information
	Name GL193897.1:subseq(369361,55000) is longer than allowed name
block (15). Truncating

SPP00000009_1.0   29 KVDCNKGVTGTIYEYGALTLNGEEYIQFKQFAGKHVLFVNVAAYXGLAA 
                     ++DC KGVTGTIYEYGALTLN EEYIQFK +AGKHVLFVNVA YXGL A 
                     QMDCYKGVTGTIYEYGALTLNDEEYIQFKHYAGKHVLFVNVATYXGLTA 
GL193897.1:subs38407 cagttaggagaatgtggcacagggtactactggacgctgaggattgtag 
                     atagaagtcgctaaagctctaaaaatataaacgaattttatccaggtcc 
                     ggtccggggccctgtgcccctcggctgcgccgcgccctccgcccacgat 


SPP00000009_1.0   78 QYP                          LNALQEELKNFGVIVLAFPC 
                     QYP                          LNAL +ELK FGV+VL FPC 
                     QYP          E:E[gaa]        LNALHQELKPFGVVVLGFPC 
GL193897.1:subs38554 ctcGGTAAGAG  Intron 1   CAGAAcagcccgcactggggcgtct 
                     aac <1-----[38564:42844]-1>  tactaaatactgttttgtcg 
                     gta                          gtaacggcgtttccggctcc 


SPP00000009_1.0  102 NQFGKQEPGTNSEILLGL                          YVCPG 
                     NQFGKQEPG NSEIL GL                          YV PG 
                     NQFGKQEPGKNSEILSGL           K:K[aag]       YVRPG 
GL193897.1:subs42907 actgacgcgaatgactgcAAGTGAGTG  Intron 2   CAGGtgccg 
                     aatgaaacgaacattcgt  <2-----[42963:43411]-2> atgcg 
                     cataaaaaagcagcttgc                          tgtat 


SPP00000009_1.0  126 SGFVPSFQLFEKGDVNGEKEQKVFTFLK                      
                      GFVP+FQLFEKGDVNGEKEQKVFTFLK                      
                     GGFVPNFQLFEKGDVNGEKEQKVFTFLK                      
GL193897.1:subs43428 ggtgcatcctgagggaggagcagtatcaGTGAGTG  Intron 3     
                     ggttcatattaagatagaaaaattctta<0-----[43512:44703]  
                     tctccttgctgagtgtaaaaggcttcgg                      


SPP00000009_1.0  154    NSCPPTSDLLGSSSQLFWEPMKVHDIRWNFEKFLVGPDGVPVMHWF 
                        NSCPPTSDLLGSS+QLFWEPMKVHDIRWNFEKFLVGPDGVPVM WF 
                        NSCPPTSDLLGSSNQLFWEPMKVHDIRWNFEKFLVGPDGVPVMRWF 
GL193897.1:subs44701 CAGattccatgctgttaccttgcaagcgactatgatcggcgggcgactt 
                     -0>acgccccattgccaattgactataatggataatttgcagtcttggt 
                        ccctactctgcaacaccggcggcccccgctggcgggtcactcgcgc 


SPP00000009_1.0  200 HQAPVSTVKSDILEYLKQFNT                             
                     H+APVSTVKSDILEYLKQF T                             
                     HKAPVSTVKSDILEYLKQFKT                             
GL193897.1:subs44842 cagcgaagatgacgtcactaa                             
                     aacctgctacattaataatac                             
                     cgtcccgcgaccggcgagcac                             


//
Making a E in phase 1 intron
Making a K in phase 2 intron
>GL193897.1:subseq(369361,55000).pep
QMDCYKGVTGTIYEYGALTLNDEEYIQFKHYAGKHVLFVNVATYXGLTAQYPELNALHQE
LKPFGVVVLGFPCNQFGKQEPGKNSEILSGLKYVRPGGGFVPNFQLFEKGDVNGEKEQKV
FTFLKNSCPPTSDLLGSSNQLFWEPMKVHDIRWNFEKFLVGPDGVPVMRWFHKAPVSTVK
SDILEYLKQFKT
//
>GL193897.1:subseq(369361,55000).[38407:44904].sp
CAGATGGATTGCTACAAGGGGGTGACGGGCACCATCTATGAGTATGGGGCCCTCACCCTC
AATGACGAGGAGTACATTCAGTTCAAGCACTACGCGGGCAAGCACGTCCTCTTTGTCAAC
GTGGCCACCTACTGAGGCTTGACAGCTCAGTATCCAGAACTGAATGCACTACACCAGGAG
CTCAAGCCTTTTGGTGTCGTCGTGCTGGGCTTTCCCTGCAACCAATTTGGAAAACAAGAA
CCAGGAAAGAACTCAGAGATCCTTTCTGGGCTCAAGTATGTGCGTCCAGGTGGTGGCTTT
GTCCCCAATTTTCAGCTCTTTGAGAAAGGGGATGTGAATGGAGAAAAAGAACAGAAGGTC
TTTACTTTCCTGAAGAACTCCTGCCCTCCAACCTCTGACCTTTTGGGCTCATCAAACCAA
CTCTTCTGGGAGCCCATGAAGGTCCACGACATCCGCTGGAACTTTGAGAAGTTCCTGGTG
GGGCCTGACGGAGTCCCTGTCATGCGCTGGTTCCACAAGGCTCCCGTCAGCACGGTCAAG
TCAGACATCCTGGAGTACCTGAAACAGTTCAAAACC
//
GL193897.1:subseq(369361,55000)	GeneWise	match	38407	44904	370.56	+	.	GL193897.1:subseq(369361,55000)-genewise-prediction-1
GL193897.1:subseq(369361,55000)	GeneWise	cds	38407	38563	0.00	+	0	GL193897.1:subseq(369361,55000)-genewise-prediction-1
GL193897.1:subseq(369361,55000)	GeneWise	intron	38564	42844	0.00	+	.	GL193897.1:subseq(369361,55000)-genewise-prediction-1
GL193897.1:subseq(369361,55000)	GeneWise	cds	42845	42962	0.00	+	2	GL193897.1:subseq(369361,55000)-genewise-prediction-1
GL193897.1:subseq(369361,55000)	GeneWise	intron	42963	43411	0.00	+	.	GL193897.1:subseq(369361,55000)-genewise-prediction-1
GL193897.1:subseq(369361,55000)	GeneWise	cds	43412	43511	0.00	+	1	GL193897.1:subseq(369361,55000)-genewise-prediction-1
GL193897.1:subseq(369361,55000)	GeneWise	intron	43512	44703	0.00	+	.	GL193897.1:subseq(369361,55000)-genewise-prediction-1
GL193897.1:subseq(369361,55000)	GeneWise	cds	44704	44904	0.00	+	0	GL193897.1:subseq(369361,55000)-genewise-prediction-1