TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|81912790|sp|Q80VC6.2|TSAP1_MOUSE RecName: Full=tRNA selenocysteine 1-associated protein 1; AltName: Full=SECp43; AltName: Full=tRNA selenocysteine-associated protein 1 (287 letters) Database: D.fasciculatum/genome.fa 25 sequences; 31,019,208 total letters Searching.........................done Score E Sequences producing significant alignments: (bits) Value gi|328876102|gb|GL883006.1| Dictyostelium fasciculatum unplaced ... 65 4e-11 gi|328869574|gb|GL883020.1| Dictyostelium fasciculatum unplaced ... 48 7e-06 gi|328870360|gb|GL883017.1| Dictyostelium fasciculatum unplaced ... 47 2e-05 gi|328871378|gb|GL883013.1| Dictyostelium fasciculatum unplaced ... 42 7e-04 gi|328875389|gb|GL883007.1| Dictyostelium fasciculatum unplaced ... 42 7e-04 gi|328872098|gb|GL883010.1| Dictyostelium fasciculatum unplaced ... 36 0.027 gi|328866594|gb|GL883026.1| Dictyostelium fasciculatum unplaced ... 34 0.14 gi|328864870|gb|GL883029.1| Dictyostelium fasciculatum unplaced ... 33 0.30 gi|328867405|gb|GL883025.1| Dictyostelium fasciculatum unplaced ... 32 0.40 gi|328873752|gb|GL883009.1| Dictyostelium fasciculatum unplaced ... 32 0.40 gi|328868227|gb|GL883021.1| Dictyostelium fasciculatum unplaced ... 30 2.0 >gi|328876102|gb|GL883006.1| Dictyostelium fasciculatum unplaced genomic scaffold Scf_Dfasci-G-b-205a01.r1-3, whole genome shotgun sequence Length = 2485436 Score = 65.5 bits (158), Expect = 4e-11 Identities = 46/166 (27%), Positives = 88/166 (53%), Gaps = 1/166 (0%) Frame = -3 Query: 4 SLWMGDLEPYMDENFISRAFATMGET-VMSVKIIRNRLTGIPAGYCFVEFADLATAEKCL 62 SL++GDL ++E ++ F+ +G T V S+ + R+ T GY +V F + AE+ L Sbjct: 1371438 SLYVGDLSQEVNELILAELFSKVGRTAVASIHVCRDSATLRSLGYAYVNFYNSVDAERAL 1371259 Query: 63 HKINGKPLPGATPAKRFKLNYATYGKQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPS 122 +N + G + ++ ++ S ++FV +L +VD+ +L++ F Y + Sbjct: 1371258 DTLNYSLILG----RPCRIMWSHRDPTKRKSNVGNIFVKNLEKNVDNALLFDTF-STYGN 1371094 Query: 123 CRGGKVVLDPTGVSKGYGFVKFTDELEQKRALTECQGAVGLGCKPV 168 K+ + G+SKGYG+V F ++ ++A+ + G + LG KP+ Sbjct: 1371093 ILSCKIEYEK-GISKGYGYVHFENQESSEQAILKVNGTILLG-KPM 1370962 Score = 33.9 bits (76), Expect = 0.14 Identities = 17/55 (30%), Positives = 31/55 (56%) Frame = -3 Query: 1 MAASLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADL 55 ++ ++++G L Y E + F+ GE + + + +RL P G+CFVE+ DL Sbjct: 2426757 VSTTIYVGYLSFYTTEEQLYELFSKCGE-IKRIIMGLDRLQKTPCGFCFVEYVDL 2426596 Score = 30.4 bits (67), Expect = 1.5 Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 1/67 (1%) Frame = +1 Query: 91 DNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDPT-GVSKGYGFVKFTDELE 149 ++S E +FVG + + + L + F + + + +++ D + G +KGYGFV F ++ Sbjct: 340636 NSSAENEVFVGGIARNTTEEELQDLFSTI-GNVKQVRIMKDRSNGENKGYGFVSFANKSN 340812 Query: 150 QKRALTE 156 K A+ + Sbjct: 340813 CKEAVVQ 340833 >gi|328869574|gb|GL883020.1| Dictyostelium fasciculatum unplaced genomic scaffold Scf_EJPB12P01AWP9W-5, whole genome shotgun sequence Length = 629417 Score = 48.1 bits (113), Expect = 7e-06 Identities = 49/203 (24%), Positives = 91/203 (44%), Gaps = 23/203 (11%) Frame = +3 Query: 2 AASLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKC 61 AA++ + D++P + E + + V+ V + +++LT +G +VEF A+ Sbjct: 76068 AATIQVRDIDPQVTEALLWELMIQVAP-VVKVFMPKDKLTQQHSGRAYVEFQSENDADYA 76244 Query: 62 LHKIN-----GKPLPGATPAKRFKLNYATYGKQPDN-----------------SPEYSLF 99 + +N G+P+ K+ ++ + DN +LF Sbjct: 76245 MRILNYIKLFGRPIK----LKKVRIV*LVIYIENDN**FTFIYIYI*NNKDKVDVGANLF 76412 Query: 100 VGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDP-TGVSKGYGFVKFTDELEQKRALTECQ 158 +G+L +VD+ +L++ F++ + K++ D TGVSKG+GFV + D A E Sbjct: 76413 IGNLDAEVDEKILHDTFIQFGAIIQPPKIMRDTSTGVSKGFGFVSY-DNFASSDASIEAM 76589 Query: 159 GAVGLGCKPVRLSVAIPKASRVK 181 L KP+ ++ A K S K Sbjct: 76590 NGEFLCNKPISVTYARKKDSTEK 76658 Score = 45.1 bits (105), Expect = 6e-05 Identities = 19/68 (27%), Positives = 40/68 (58%) Frame = +3 Query: 1 MAASLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEK 60 + A+L++G+L+ +DE + F G + KI+R+ TG+ G+ FV + + A+++ Sbjct: 76395 VGANLFIGNLDAEVDEKILHDTFIQFGAIIQPPKIMRDTSTGVSKGFGFVSYDNFASSDA 76574 Query: 61 CLHKINGK 68 + +NG+ Sbjct: 76575 SIEAMNGE 76598 >gi|328870360|gb|GL883017.1| Dictyostelium fasciculatum unplaced genomic scaffold Scf_Dfasci-G-b-190b03.r1-5, whole genome shotgun sequence Length = 548609 Score = 46.6 bits (109), Expect = 2e-05 Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 1/80 (1%) Frame = -3 Query: 92 NSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDPTGV-SKGYGFVKFTDELEQ 150 NS +Y LFVG L +V D ML + F + YPS KV+ + +KG+GFV FT + Sbjct: 273162 NSNDYRLFVGQLGNEVTDEMLGQAFAR-YPSFEKAKVIREKKSQKTKGFGFVAFTSAADY 272986 Query: 151 KRALTECQGAVGLGCKPVRL 170 +A E G +G +P+ L Sbjct: 272985 IKAYKEMNGKY-VGNRPLIL 272929 >gi|328871378|gb|GL883013.1| Dictyostelium fasciculatum unplaced genomic scaffold Scf_ET2XIPL01CNAVH-3, whole genome shotgun sequence Length = 1908399 Score = 41.6 bits (96), Expect = 7e-04 Identities = 36/155 (23%), Positives = 70/155 (45%), Gaps = 4/155 (2%) Frame = +1 Query: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63 ++++ +L+ +D + F+ G ++S K++ + T + G+ FV + +A+K + Sbjct: 1497754 NIFIKNLDKSVDHKALFDTFSAFGN-ILSCKVVTDE-TNVSKGFGFVHYESQDSADKAIM 1497927 Query: 64 KINGKPLPGAT----PAKRFKLNYATYGKQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKV 119 K+NG + P K K T + N ++V +L+ DV++ L + V Sbjct: 1497928 KVNGMIINDQKVFVGPFKSSKERGQTQELKYTN-----VYVKNLSEDVNEEELRDLLVP- 1498089 Query: 120 YPSCRGGKVVLDPTGVSKGYGFVKFTDELEQKRAL 154 Y ++ D SKG+GF F E K + Sbjct: 1498090 YGKITNLTIMSDEKSKSKGFGFANFETPDEAKNCV 1498194 Score = 40.4 bits (93), Expect = 0.001 Identities = 37/145 (25%), Positives = 61/145 (42%), Gaps = 6/145 (4%) Frame = +1 Query: 46 GYCFVEFADLATAEKCLHKINGKPLPGAT-----PAKRFKLNYATYGKQPDNSPEYSLFV 100 G+ F F A+ C+ NGK G K+ + K +L++ Sbjct: 1498144 GFGFANFETPDEAKNCVEAENGKLFHGKVIYVGRAQKKMEREAELKHKFETKYQGVNLYI 1498323 Query: 101 GDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDPTGVS-KGYGFVKFTDELEQKRALTECQG 159 ++ +D L F Y + KV+ D S KG+GFV +T E +A+ E G Sbjct: 1498324 KNIDDSIDSDKLRSTFA-AYGTITSAKVMRDDKSTSSKGFGFVCYTTPDEASKAVAEMHG 1498500 Query: 160 AVGLGCKPVRLSVAIPKASRVKPVE 184 + +G KP+ ++ A K R + +E Sbjct: 1498501 RM-VGNKPLYVAFAQRKEIRRQHLE 1498572 Score = 39.7 bits (91), Expect = 0.002 Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 1/71 (1%) Frame = +1 Query: 5 LWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHK 64 +++G + E+ + FA +++ +K+IRN+ T P G F+ + AEK + + Sbjct: 1191817 IFIGQIPKSFTEDDLREMFADFVDSIEEIKVIRNKATQEPQGCAFITMTNPDVAEKSIQQ 1191996 Query: 65 I-NGKPLPGAT 74 + N K PG + Sbjct: 1191997 LHNSKKFPGVS 1192029 Score = 39.3 bits (90), Expect = 0.003 Identities = 27/104 (25%), Positives = 49/104 (47%) Frame = +1 Query: 58 AEKCLHKINGKPLPGATPAKRFKLNYATYGKQPDNSPEYSLFVGDLTPDVDDGMLYEFFV 117 AE+ L +N + G K ++ ++ S ++F+ +L VD L++ F Sbjct: 1497649 AERALDTLNNTLVKG----KACRIMWSQRDPSLRKSGVGNIFIKNLDKSVDHKALFDTF- 1497813 Query: 118 KVYPSCRGGKVVLDPTGVSKGYGFVKFTDELEQKRALTECQGAV 161 + + KVV D T VSKG+GFV + + +A+ + G + Sbjct: 1497814 SAFGNILSCKVVTDETNVSKGFGFVHYESQDSADKAIMKVNGMI 1497945 Score = 35.0 bits (79), Expect = 0.061 Identities = 38/157 (24%), Positives = 62/157 (39%), Gaps = 13/157 (8%) Frame = -3 Query: 3 ASLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCL 62 ++L++ +++P M + + F+ GE + N Y F+ + AEK L Sbjct: 1153249 STLYVTNIDPNMKRSVVMALFSHFGELETKECVFINN-------YGFIRYTKSYDAEKAL 1153091 Query: 63 HKINGKPLPGATPAKRFKLNYATYGKQPDNSPEYSLFVGDLTPDVDDGMLYEFF------ 116 K+NG FK + +S + + +T DV+ G + E F Sbjct: 1153090 AKLNG-----------FKFGERNLKVKWSDSCDQRTSI-HITFDVNSGNIPEGFHQMVCQ 1152947 Query: 117 -------VKVYPSCRGGKVVLDPTGVSKGYGFVKFTD 146 +K Y R K TGV +GYGF+ F D Sbjct: 1152946 KCQQFGKIKHYNIPRDAK-----TGVYEGYGFIHFKD 1152851 Score = 29.3 bits (64), Expect = 3.4 Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%) Frame = -2 Query: 90 PDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDPT-GVSKGYGFVKFTDEL 148 P + ++FV +L +D L F P + V+++P SKG+GFV F + Sbjct: 1694951 PREESKDTVFVYNLPFSYNDEQLLALFKDYTP--KSAHVIINPRFKKSKGFGFVVFDNAE 1694778 Query: 149 EQKRAL 154 +Q++AL Sbjct: 1694777 QQQKAL 1694760 Score = 28.1 bits (61), Expect = 7.5 Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 7/54 (12%) Frame = -2 Query: 43 IPAGYCFVEFADLATAEKCLHKINGKPLPG-------ATPAKRFKLNYATYGKQ 89 +PAGY V L T EKC+ G PAK +L+Y KQ Sbjct: 241349 VPAGYVHVNRDTLKTKEKCIKVCKESLAQGLSVVIDNTNPAKTDRLDYIKLAKQ 241188 >gi|328875389|gb|GL883007.1| Dictyostelium fasciculatum unplaced genomic scaffold Scf_Dfasci-G-p-12c09.r1-3, whole genome shotgun sequence Length = 1770755 Score = 41.6 bits (96), Expect = 7e-04 Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 1/69 (1%) Frame = -2 Query: 92 NSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDP-TGVSKGYGFVKFTDELEQ 150 +S + +LFV L VDD LY+ F + Y + +V++D TG +KGYGFVKF + + Sbjct: 1505800 SSHDTNLFVFHLPSFVDDVYLYKLFSQ-YGPLQSVRVIMDKETGENKGYGFVKFQNRDDA 1505624 Query: 151 KRALTECQG 159 +L + G Sbjct: 1505623 VTSLNQMNG 1505597 Score = 35.0 bits (79), Expect = 0.061 Identities = 19/64 (29%), Positives = 39/64 (60%) Frame = -2 Query: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63 +L++ L ++D+ ++ + F+ G + SV++I ++ TG GY FV+F + A L+ Sbjct: 1505785 NLFVFHLPSFVDDVYLYKLFSQYGP-LQSVRVIMDKETGENKGYGFVKFQNRDDAVTSLN 1505609 Query: 64 KING 67 ++NG Sbjct: 1505608 QMNG 1505597 Score = 31.6 bits (70), Expect = 0.68 Identities = 17/70 (24%), Positives = 35/70 (50%) Frame = -2 Query: 5 LWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHK 64 ++ G + ++E + F+ GE V ++RN+ TG G+ F+++ D + + Sbjct: 1584748 IFAGGMPFDLNEGDVVTVFSQYGE-VDEYDLVRNKETGKSQGFAFIKYMDQKSTILAVDN 1584572 Query: 65 INGKPLPGAT 74 +NG + G T Sbjct: 1584571 LNGVKILGRT 1584542 Score = 31.6 bits (70), Expect = 0.68 Identities = 23/66 (34%), Positives = 29/66 (43%) Frame = +2 Query: 96 YSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDPTGVSKGYGFVKFTDELEQKRALT 155 Y D+ V D ML E F K+ V +G +KGYGFVKF +L Sbjct: 1085987 YLSIKSDIARGVTDEMLKEEFSKIAEVSEAIVVKNKHSGETKGYGFVKFF-------SLN 1086145 Query: 156 ECQGAV 161 +C AV Sbjct: 1086146 DCYRAV 1086163 Score = 28.9 bits (63), Expect = 4.4 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 6/61 (9%) Frame = -1 Query: 86 YGKQPDN------SPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDPTGVSKGY 139 YG Q D+ + ++FV L + D L+ F + + KV++DP G S GY Sbjct: 1507682 YGDQGDDYESSIEKDQTNVFVKYLPNEFGDSELHNLFTQ-FGKVMSAKVMVDPKGNSYGY 1507506 Query: 140 G 140 G Sbjct: 1507505 G 1507503 >gi|328872098|gb|GL883010.1| Dictyostelium fasciculatum unplaced genomic scaffold Scf_Dfasci-F-a-25c12.r2-5, whole genome shotgun sequence Length = 4166812 Score = 36.2 bits (82), Expect = 0.027 Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 3/81 (3%) Frame = +3 Query: 79 FKLNYATYGKQPDNS---PEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDPTGV 135 F +N K DN E LFVG L +D + + F K Y + +V +P G Sbjct: 2896131 F*MNKPLQVKYSDNEIEKMERKLFVGMLGTSNED-QIKQLFSK-YGNIEDINIVREPDGK 2896304 Query: 136 SKGYGFVKFTDELEQKRALTE 156 KGYGFVKF+ E + A+ + Sbjct: 2896305 PKGYGFVKFSMREEAEEAIRD 2896367 Score = 30.0 bits (66), Expect = 2.0 Identities = 15/34 (44%), Positives = 20/34 (58%) Frame = -1 Query: 33 VKIIRNRLTGIPAGYCFVEFADLATAEKCLHKIN 66 VKI+R R T GY FV+F+ +TA + IN Sbjct: 848686 VKIVRERDTHESKGYAFVKFSKSSTAALAMETIN 848585 Score = 29.6 bits (65), Expect = 2.6 Identities = 15/52 (28%), Positives = 29/52 (55%) Frame = -1 Query: 16 ENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKING 67 EN ++ AF G T +KI+ ++ T GY ++++ ++A + K+NG Sbjct: 849136 ENQLAVAFQPFGTT--EIKIVVDKDTRESKGYAYIKYQKASSAALAIEKMNG 848987 Score = 27.7 bits (60), Expect = 9.8 Identities = 11/49 (22%), Positives = 27/49 (55%) Frame = -2 Query: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEF 52 +L++ ++ E + F+ G + ++++ + ++G P GY F+EF Sbjct: 2950860 TLFVARIDYNTPETKLKEEFSQFGP-IKKIRLVHDAVSGKPKGYAFIEF 2950717 >gi|328866594|gb|GL883026.1| Dictyostelium fasciculatum unplaced genomic scaffold Scf_EU5ZYIE02H8LDV-5, whole genome shotgun sequence Length = 1919465 Score = 33.9 bits (76), Expect = 0.14 Identities = 19/77 (24%), Positives = 39/77 (50%) Frame = +1 Query: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63 +L++ +L D+ + R F+ G + SVK++++ +T G+ FV +L + ++ Sbjct: 43711 NLYVYNLPTDADDALLYRLFSPSG-AIASVKVVKDPITQACRGFGFVRMVNLTDSLNAIN 43887 Query: 64 KINGKPLPGATPAKRFK 80 +NG + G FK Sbjct: 43888 SVNGSIVEGKILQVSFK 43938 Score = 31.6 bits (70), Expect = 0.68 Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Frame = +2 Query: 87 GKQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLD-PTGVSKGYGFVKFT 145 G +N+ +LFV L + L+ F V+ +V++D +G+S+G+GFVK+ Sbjct: 42677 GGGDNNNNNGNLFVNFLPNTITTETLHAMF-SVFGEIESCRVMVDLVSGLSRGFGFVKYK 42853 Query: 146 DELEQKR 152 D K+ Sbjct: 42854 DNASGKK 42874 Score = 30.0 bits (66), Expect = 2.0 Identities = 14/22 (63%), Positives = 17/22 (77%), Gaps = 1/22 (4%) Frame = +1 Query: 127 KVVLDP-TGVSKGYGFVKFTDE 147 K+++D T SKGYGFV FTDE Sbjct: 765457 KIIMDKNTQKSKGYGFVTFTDE 765522 >gi|328864870|gb|GL883029.1| Dictyostelium fasciculatum unplaced genomic scaffold Scf_EUAJFUG02HR96I-5, whole genome shotgun sequence Length = 3408800 Score = 32.7 bits (73), Expect = 0.30 Identities = 17/68 (25%), Positives = 35/68 (51%) Frame = -3 Query: 5 LWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHK 64 +++G++ + E I AF+ G + S+ + ++ TG G+CF+E+ A + Sbjct: 1780662 IYIGNIHFNLTEADIVAAFSPFGP-IKSLSLSKDPATGRSRGFCFIEYTYPEAAINAIQN 1780486 Query: 65 INGKPLPG 72 +N K + G Sbjct: 1780485 MNQKTISG 1780462 Score = 31.2 bits (69), Expect = 0.88 Identities = 34/150 (22%), Positives = 59/150 (39%), Gaps = 25/150 (16%) Frame = +1 Query: 36 IRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYA---TYGKQPDN 92 IR +L+ G+ F +F+ A +C+ K NG + G + + + A T GK ++ Sbjct: 1575598 IRGKLS---CGFGFAQFSTKHGAYECIKKWNGALVDGHELSIKLSTSNAATGTDGKASNS 1575768 Query: 93 SPEYSLFVGDLTPDVDDGMLYEFFVKV----------------------YPSCRGGKVVL 130 + S D D + + FV Y + ++ Sbjct: 1575769 ANSASNKREDRLKDEESKRHDKGFVSTKISIKNIAFECKPIEIRKLFTTYGELKSVRLPS 1575948 Query: 131 DPTGVSKGYGFVKFTDELEQKRALTECQGA 160 PTG +G+GFV++ E E K A+ Q + Sbjct: 1575949 KPTGGHRGFGFVEYLTEQEAKNAMEALQNS 1576038 Score = 30.8 bits (68), Expect = 1.2 Identities = 18/57 (31%), Positives = 28/57 (49%) Frame = -3 Query: 16 ENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPG 72 E + FA G+ + ++KI N L G GY FVE + A + K++ K + G Sbjct: 672297 EQQLETFFAEFGK-LKTLKIFENELNGKSKGYAFVELSSNEQALQAKEKLSDKQING 672130 Score = 29.3 bits (64), Expect = 3.4 Identities = 13/63 (20%), Positives = 30/63 (47%) Frame = -1 Query: 5 LWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHK 64 +++G + ++E I G + + ++++ TG GY F E+ + C++ Sbjct: 1617608 IFIGGIPTTLNEEQIKSMLLAFGR-LKAFNLVKDPKTGSSKGYAFCEYYETEETNDCING 1617432 Query: 65 ING 67 +NG Sbjct: 1617431 LNG 1617423 Score = 28.5 bits (62), Expect = 5.7 Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 5/61 (8%) Frame = -3 Query: 99 FVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVL-----DPTGVSKGYGFVKFTDELEQKRA 153 +VG + V+D EF K+ C GKVV DP G KG+GF ++ RA Sbjct: 1953387 YVGRIPESVED----EFIKKLLEMC--GKVVKWTRASDPNGKLKGFGFCEYETPEGVLRA 1953226 Query: 154 L 154 L Sbjct: 1953225 L 1953223 >gi|328867405|gb|GL883025.1| Dictyostelium fasciculatum unplaced genomic scaffold Scf_EU5ZYIE01EUG8B-5, whole genome shotgun sequence Length = 941765 Score = 32.3 bits (72), Expect = 0.40 Identities = 19/63 (30%), Positives = 29/63 (46%) Frame = -3 Query: 5 LWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHK 64 +++G L E ++ F G+ V V + RN+ TG GY FV F A+ Sbjct: 156600 IYIGHLPHGFYETQLAAYFTQFGD-VTGVYVSRNKKTGQSRGYAFVRFLKAEVADTAAKS 156424 Query: 65 ING 67 +NG Sbjct: 156423 MNG 156415 >gi|328873752|gb|GL883009.1| Dictyostelium fasciculatum unplaced genomic scaffold Scf_Dfasci-G-o-33e01.r1-3, whole genome shotgun sequence Length = 1429294 Score = 32.3 bits (72), Expect = 0.40 Identities = 25/95 (26%), Positives = 44/95 (46%) Frame = -2 Query: 1 MAASLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEK 60 ++ ++++G++ + E I R GE + SV+++R + FV F +ATA Sbjct: 111441 LSRAIYIGNVSENLTEKDIRRECEKYGE-IESVRVLRKKACA------FVNFITVATATA 111283 Query: 61 CLHKINGKPLPGATPAKRFKLNYATYGKQPDNSPE 95 L +NGK L ++NY Q +S E Sbjct: 111282 ALQALNGKRLGDTV----VRVNYGKPQPQLSSSTE 111190 >gi|328868227|gb|GL883021.1| Dictyostelium fasciculatum unplaced genomic scaffold Scf_ET2XIPL01COFD4-5, whole genome shotgun sequence Length = 3468650 Score = 30.0 bits (66), Expect = 2.0 Identities = 14/36 (38%), Positives = 22/36 (61%) Frame = -1 Query: 112 LYEFFVKVYPSCRGGKVVLDPTGVSKGYGFVKFTDE 147 L E+F++ + K++ + GV KGYGF+ F DE Sbjct: 1482053 LKEYFLQ-FGEVTDCKMLYEKNGVGKGYGFITFRDE 1481949 Database: D.fasciculatum/genome.fa Posted date: Nov 21, 2011 7:46 PM Number of letters in database: 31,019,208 Number of sequences in database: 25 Lambda K H 0.317 0.135 0.412 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 7,170,662 Number of Sequences: 25 Number of extensions: 78112 Number of successful extensions: 332 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 10 Number of HSP's that attempted gapping in prelim test: 238 Number of HSP's gapped (non-prelim): 201 length of query: 287 length of database: 10,339,736 effective HSP length: 99 effective length of query: 188 effective length of database: 10,337,261 effective search space: 1943405068 effective search space used: 1943405068 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 60 (27.7 bits)