TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|81912790|sp|Q80VC6.2|TSAP1_MOUSE RecName: Full=tRNA selenocysteine 1-associated protein 1; AltName: Full=SECp43; AltName: Full=tRNA selenocysteine-associated protein 1 (287 letters) Database: A.laibachii_Nc14/genome.fa 3816 sequences; 32,740,139 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|325183812|emb|FR824093.1| Albugo laibachii Nc14, genomic cont... 79 3e-23 gi|325183931|emb|FR824095.1| Albugo laibachii Nc14, genomic cont... 79 3e-23 gi|325182412|emb|FR824072.1| Albugo laibachii Nc14, genomic cont... 59 5e-09 gi|325186688|emb|FR824161.1| Albugo laibachii Nc14, genomic cont... 57 1e-08 gi|325183295|emb|FR824085.1| Albugo laibachii Nc14, genomic cont... 54 1e-07 gi|325189095|emb|FR824246.1| Albugo laibachii Nc14, genomic cont... 35 3e-06 gi|325189588|emb|FR824266.1| Albugo laibachii Nc14, genomic cont... 36 0.037 gi|325184977|emb|FR824117.1| Albugo laibachii Nc14, genomic cont... 35 0.048 gi|325180061|emb|FR824049.1| Albugo laibachii Nc14, genomic cont... 35 0.081 gi|325188022|emb|FR824204.1| Albugo laibachii Nc14, genomic cont... 34 0.14 gi|325183168|emb|FR824083.1| Albugo laibachii Nc14, genomic cont... 33 0.31 gi|325186956|emb|FR824170.1| Albugo laibachii Nc14, genomic cont... 32 0.40 gi|325187678|emb|FR824193.1| Albugo laibachii Nc14, genomic cont... 32 0.53 gi|325191161|emb|FR824380.1| Albugo laibachii Nc14, genomic cont... 32 0.53 gi|325185797|emb|FR824136.1| Albugo laibachii Nc14, genomic cont... 30 2.6 gi|325191557|emb|FR824371.1| Albugo laibachii Nc14, genomic cont... 30 2.6 gi|325183108|emb|FR824082.1| Albugo laibachii Nc14, genomic cont... 29 3.4 gi|325185948|emb|FR824140.1| Albugo laibachii Nc14, genomic cont... 28 10.0 >gi|325183812|emb|FR824093.1| Albugo laibachii Nc14, genomic contig CONTIG_48_NC14_v4_120044_121 Length = 120044 Score = 78.6 bits (192), Expect(3) = 3e-23 Identities = 44/102 (43%), Positives = 63/102 (61%), Gaps = 1/102 (0%) Frame = -1 Query: 73 ATPAKRFKLNYATYGKQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDP 132 A RF+LN+ G++ D ++S+FVGDL P+V D +L F + S RG KVV+DP Sbjct: 99860 ANTIHRFRLNWGAGGRRIDTVEDHSIFVGDLAPEVSDELLLSTFSTRFSSVRGAKVVIDP 99681 Query: 133 -TGVSKGYGFVKFTDELEQKRALTECQGAVGLGCKPVRLSVA 173 T + KG+GFV+F D+ E +AL G V +P+R+SVA Sbjct: 99680 VTRMPKGFGFVRFGDKGEADQALQTMNG-VYCSSRPMRVSVA 99558 Score = 39.7 bits (91), Expect(3) = 3e-23 Identities = 17/37 (45%), Positives = 26/37 (70%) Frame = -3 Query: 32 SVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGK 68 S+K+IR+++TG PAGY F+EF A+ L+ NG+ Sbjct: 100029 SIKLIRDKVTGYPAGYGFLEFPSQQGAQAVLNTFNGQ 99919 Score = 28.1 bits (61), Expect(3) = 3e-23 Identities = 11/24 (45%), Positives = 16/24 (66%) Frame = -1 Query: 4 SLWMGDLEPYMDENFISRAFATMG 27 +LWMGD++ DE +I FA+ G Sbjct: 100172 TLWMGDIQLNWDEAYIGSLFASAG 100101 >gi|325183931|emb|FR824095.1| Albugo laibachii Nc14, genomic contig CONTIG_50_NC14_v4_115337_117 Length = 115337 Score = 78.6 bits (192), Expect(3) = 3e-23 Identities = 44/102 (43%), Positives = 63/102 (61%), Gaps = 1/102 (0%) Frame = +2 Query: 73 ATPAKRFKLNYATYGKQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDP 132 A RF+LN+ G++ D ++S+FVGDL P+V D +L F + S RG KVV+DP Sbjct: 20909 ANTIHRFRLNWGAGGRRIDTVEDHSIFVGDLAPEVSDELLLSTFSTRFSSVRGAKVVIDP 21088 Query: 133 -TGVSKGYGFVKFTDELEQKRALTECQGAVGLGCKPVRLSVA 173 T + KG+GFV+F D+ E +AL G V +P+R+SVA Sbjct: 21089 VTRMPKGFGFVRFGDKGEADQALQTMNG-VYCSSRPMRVSVA 21211 Score = 39.7 bits (91), Expect(3) = 3e-23 Identities = 17/37 (45%), Positives = 26/37 (70%) Frame = +1 Query: 32 SVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGK 68 S+K+IR+++TG PAGY F+EF A+ L+ NG+ Sbjct: 20740 SIKLIRDKVTGYPAGYGFLEFPSQQGAQAVLNTFNGQ 20850 Score = 28.1 bits (61), Expect(3) = 3e-23 Identities = 11/24 (45%), Positives = 16/24 (66%) Frame = +2 Query: 4 SLWMGDLEPYMDENFISRAFATMG 27 +LWMGD++ DE +I FA+ G Sbjct: 20597 TLWMGDIQLNWDEAYIGSLFASAG 20668 >gi|325182412|emb|FR824072.1| Albugo laibachii Nc14, genomic contig CONTIG_27_NC14_v4_154116_231 Length = 154116 Score = 58.5 bits (140), Expect = 5e-09 Identities = 38/135 (28%), Positives = 66/135 (48%) Frame = +1 Query: 30 VMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYGKQ 89 V S+++ R+ +T GY +V F +L AE+ L +N + G ++ ++ Sbjct: 85204 VASIRVCRDAVTRRSLGYAYVNFHNLVDAERALDTMNFTCIKGVP----CRIMWSQRDPS 85371 Query: 90 PDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDPTGVSKGYGFVKFTDELE 149 S ++FV +L P +D+ LY+ F ++ + KV DPTG SKGYG+V + Sbjct: 85372 LRKSGVGNIFVKNLDPSIDNKALYDTF-SLFGNILSCKVANDPTGQSKGYGYVHYETAEA 85548 Query: 150 QKRALTECQGAVGLG 164 A+ + G + G Sbjct: 85549 ATEAINKINGMLIAG 85593 >gi|325186688|emb|FR824161.1| Albugo laibachii Nc14, genomic contig CONTIG_116_NC14_v4_73775_212 Length = 73775 Score = 57.4 bits (137), Expect = 1e-08 Identities = 49/177 (27%), Positives = 87/177 (49%), Gaps = 1/177 (0%) Frame = +3 Query: 3 ASLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCL 62 A++++G+L+ + E + G +V++V + R+++T Y FVEF AE + Sbjct: 60675 ATIYIGNLDDKVSEELLWELMLQAG-SVVNVHMPRDKVTTNHQNYGFVEFRTEECAEYAI 60851 Query: 63 HKINGKPLPGATPAKRFKLNYATYGKQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPS 122 +N + G K ++ A+ K+ + +LF+G+L P+VD+ +LY+ F Sbjct: 60852 KIMNMIQVYG----KPIRVKKASQDKKTLDIGA-NLFIGNLDPEVDEKLLYDTFSAFGGI 61016 Query: 123 CRGGKVVLDP-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGCKPVRLSVAIPKAS 178 K++ DP T S+G+GF+ F D E EC A L + + + A K S Sbjct: 61017 IETPKIMRDPDTKHSRGFGFISF-DAFEASDLAIECMNAQYLCNRQIVVQYAFKKDS 61184 >gi|325183295|emb|FR824085.1| Albugo laibachii Nc14, genomic contig CONTIG_40_NC14_v4_133649_231 Length = 133649 Score = 53.9 bits (128), Expect = 1e-07 Identities = 41/108 (37%), Positives = 56/108 (51%), Gaps = 8/108 (7%) Frame = +3 Query: 71 PGATPAKRF-------KLNYATYGKQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSC 123 P T AKRF + T + PDN ++ LF GDL +V D +L F +PS Sbjct: 51363 PVLTGAKRFVRVAGGERWEDVTLAEWPDN--DFRLFCGDLGNEVTDELLAHNF-SCFPSF 51533 Query: 124 RGGKVVLDP-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGCKPVRL 170 + KV+ D T S+GYGFV F D + +AL E G +G +PV+L Sbjct: 51534 QRAKVIRDKFTHKSRGYGFVSFGDPFDCAKALREMNGKY-IGNRPVKL 51674 >gi|325189095|emb|FR824246.1| Albugo laibachii Nc14, genomic contig CONTIG_201_NC14_v4_47019_231 Length = 47019 Score = 34.7 bits (78), Expect(2) = 3e-06 Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 2/91 (2%) Frame = +3 Query: 95 EYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDPTGVSKGYGFVKFTDELEQKRAL 154 E+ LF+G + + +Y+ F + P + PTG SKG F+KF + ++ Sbjct: 21474 EHKLFIGMIPKTATEQAIYDIFGEFGPIDEVFILRHQPTGQSKGCAFLKFKERESAVASI 21653 Query: 155 TECQGAVGL--GCKPVRLSVAIPKASRVKPV 183 + G + + G P+ + A + R++ V Sbjct: 21654 EQLNGKITMMNGVSPLVVKFADSRRQRLQRV 21746 Score = 34.3 bits (77), Expect = 0.11 Identities = 20/65 (30%), Positives = 36/65 (55%) Frame = +3 Query: 3 ASLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCL 62 A+L++ L + + ++ AFA G TV+S K+ ++LTG G+ FV + A+ + Sbjct: 22194 ANLFIYHLPHDLTDADLATAFAPFG-TVISAKVYMDKLTGESKGFGFVSYDAAEAADNAI 22370 Query: 63 HKING 67 +NG Sbjct: 22371 ASMNG 22385 Score = 33.9 bits (76), Expect(2) = 3e-06 Identities = 20/64 (31%), Positives = 33/64 (51%) Frame = +2 Query: 5 LWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHK 64 L++G + M E + GE V+ + IIR++LTG G F FA AE+ + + Sbjct: 21167 LFIGQVPRTMTETELLPILEAFGE-VVDLTIIRDKLTGSHRGCAFASFASPEDAERAVEE 21343 Query: 65 INGK 68 ++ K Sbjct: 21344 LHNK 21355 Score = 30.8 bits (68), Expect = 1.2 Identities = 30/113 (26%), Positives = 46/113 (40%), Gaps = 11/113 (9%) Frame = +3 Query: 58 AEKCLHKINGKPLPGATPAKR------FKLNYATYG----KQPDNSPEYSLFVGDLTPDV 107 +E +H + LPG+ A +N + G Q + P +LF+ L D+ Sbjct: 22050 SESAVHSGSSDVLPGSDSAALSGSMVGMDINASAGGVRSTTQLEGPPGANLFIYHLPHDL 22229 Query: 108 DDGMLYEFFVKVYPSCRGGKVVLDP-TGVSKGYGFVKFTDELEQKRALTECQG 159 D L F + + KV +D TG SKG+GFV + A+ G Sbjct: 22230 TDADLATAFAP-FGTVISAKVYMDKLTGESKGFGFVSYDAAEAADNAIASMNG 22385 >gi|325189588|emb|FR824266.1| Albugo laibachii Nc14, genomic contig CONTIG_221_NC14_v4_43509_236 Length = 43509 Score = 35.8 bits (81), Expect = 0.037 Identities = 18/58 (31%), Positives = 33/58 (56%) Frame = +3 Query: 35 IIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYGKQPDN 92 ++ +R +G P GY F E+AD ATA + +NG + G + ++++A G++ N Sbjct: 33210 LVTDRDSGKPKGYGFCEYADGATALSAMRNLNGYEING----RNLRVDFADGGERSSN 33371 >gi|325184977|emb|FR824117.1| Albugo laibachii Nc14, genomic contig CONTIG_72_NC14_v4_96858_243 Length = 96858 Score = 35.4 bits (80), Expect = 0.048 Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Frame = +1 Query: 98 LFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDP-TGVSKGYGFVKFTDELEQKRALTE 156 +FV L DVDD LY F + + KVV D TG SKG+GF+ + A+ + Sbjct: 51730 VFVAGLPRDVDDDALYNKF-RAFGDMFQAKVVFDAATGRSKGFGFLTYRQYDHAMDAIDK 51906 Query: 157 CQGAV 161 G V Sbjct: 51907 TNGKV 51921 >gi|325180061|emb|FR824049.1| Albugo laibachii Nc14, genomic contig CONTIG_4_NC14_v4_277804_239 Length = 277804 Score = 34.7 bits (78), Expect = 0.081 Identities = 20/69 (28%), Positives = 37/69 (53%) Frame = +3 Query: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63 +L++G L ++ I + F++ G + V+++R+ +T GY FVE+ D E+ L Sbjct: 23940 TLFIGRLHSETSQDAIYQLFSSYGP-IAHVRLVRDIVTKASKGYAFVEYRDRRHFERALE 24116 Query: 64 KINGKPLPG 72 N + L G Sbjct: 24117 DGNDRILDG 24143 Score = 33.9 bits (76), Expect = 0.14 Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 4/55 (7%) Frame = -2 Query: 30 VMSVKIIRNRLTGIPAGYCFVEFADLATAEKCL----HKINGKPLPGATPAKRFK 80 V++V+IIR++ TG+ G+ +V F + A K L K +G+ L KRFK Sbjct: 182523 VLNVRIIRDKNTGLGKGFGYVRFHNAAHVPKALSIHGKKFDGRELRITVCGKRFK 182359 Score = 33.1 bits (74), Expect = 0.24 Identities = 19/60 (31%), Positives = 28/60 (46%) Frame = +3 Query: 97 SLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDPTGVSKGYGFVKFTDELEQKRALTE 156 +LF+G L + +Y+ F P V T SKGY FV++ D +RAL + Sbjct: 23940 TLFIGRLHSETSQDAIYQLFSSYGPIAHVRLVRDIVTKASKGYAFVEYRDRRHFERALED 24119 >gi|325188022|emb|FR824204.1| Albugo laibachii Nc14, genomic contig CONTIG_159_NC14_v4_58101_232 Length = 58101 Score = 33.9 bits (76), Expect = 0.14 Identities = 17/50 (34%), Positives = 30/50 (60%) Frame = -2 Query: 2 AASLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVE 51 +++L++G+L Y EN + F+ +G T+ V + +R P G+CFVE Sbjct: 52514 SSTLYIGNLSFYTSENQLCELFSRVG-TIKRVIMGLDRFKKTPCGFCFVE 52368 >gi|325183168|emb|FR824083.1| Albugo laibachii Nc14, genomic contig CONTIG_38_NC14_v4_136441_241 Length = 136441 Score = 32.7 bits (73), Expect = 0.31 Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 4/108 (3%) Frame = -3 Query: 42 GIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYAT-YGKQPDNSPEYSLFV 100 G P+G + F+ + AE L +++G G + K+ A ++P+N + FV Sbjct: 82301 GRPSGKARIRFSCASEAEAAL-ELDGSDFGG----RWLKIQLANEILEKPENCT--TAFV 82143 Query: 101 GDLTPDVDDGMLYEFFVKV--YPSCRGGKVVLD-PTGVSKGYGFVKFT 145 G+L D DD + EFF + CR ++ D TG +G G+V+FT Sbjct: 82142 GNLPWDADDNSVCEFFSQCGEIGECR---LLSDRETGEFRGIGYVEFT 82008 >gi|325186956|emb|FR824170.1| Albugo laibachii Nc14, genomic contig CONTIG_125_NC14_v4_70474_256 Length = 70474 Score = 32.3 bits (72), Expect = 0.40 Identities = 17/60 (28%), Positives = 31/60 (51%) Frame = -2 Query: 3 ASLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCL 62 +S+++G ++ + F + G T+ V I+ ++ TG P GY ++EFA E L Sbjct: 31260 SSVYVGQVDYGSTPEELQALFQSCG-TINRVTILCDKFTGQPKGYAYIEFASKDAVESAL 31084 >gi|325187678|emb|FR824193.1| Albugo laibachii Nc14, genomic contig CONTIG_148_NC14_v4_61199_195 Length = 61199 Score = 32.0 bits (71), Expect = 0.53 Identities = 43/196 (21%), Positives = 74/196 (37%), Gaps = 40/196 (20%) Frame = +1 Query: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63 ++++G L + E + + F +G+T V +IR++ T G+ +VE ++L K L Sbjct: 29626 TVFIGQLTQKVRERDLEKYFNKVGKTE-HVLLIRDKFTNRSKGFAYVEMSNLEDVPKVL- 29799 Query: 64 KINGKP-----LPGATPAKRFKLNYAT---------------YGKQPDNSPEYSL----- 98 +NG+ P A + N+A N P +L Sbjct: 29800 LLNGQIPEFQIFPVMIKASEAEKNFAAKKDTVMSSTMRSSDWLNSSESNGPNSALAAAIA 29979 Query: 99 ---------------FVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDPTGVSKGYGFVK 143 + G+L +V + L F + + D G SKGYGF++ Sbjct: 29980 SSMSSGGSLSAASRIYCGNLHTNVTEDHLRVVFHS-FGEVVSVNINRDEMGRSKGYGFIQ 30156 Query: 144 FTDELEQKRALTECQG 159 F E AL++ G Sbjct: 30157 FGTPQEANLALSKGNG 30204 >gi|325191161|emb|FR824380.1| Albugo laibachii Nc14, genomic contig CONTIG_335_NC14_v4_27457_267 Length = 27457 Score = 32.0 bits (71), Expect = 0.53 Identities = 19/53 (35%), Positives = 27/53 (50%) Frame = +1 Query: 41 TGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYGKQPDNS 93 TG G+CF+EF D+ AE + +N G+T A R A K+ D+S Sbjct: 23302 TGRSKGFCFLEFNDVLAAESAVQVLN-----GSTMANRAIKVRALMAKKEDSS 23445 Score = 30.4 bits (67), Expect = 1.5 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Frame = +1 Query: 19 ISRAFATMGETVMSVKI-IRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGAT 74 + FA GE V + + +G+ GY F+EF D A + +NG L G T Sbjct: 23704 VQSIFAPFGEIKHCVMTAVSSSESGVHRGYGFIEFGDEICAMNAIQHMNGFELAGQT 23874 Score = 28.5 bits (62), Expect = 5.8 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = +1 Query: 133 TGVSKGYGFVKFTDELEQKRALTECQG 159 +GV +GYGF++F DE+ A+ G Sbjct: 23773 SGVHRGYGFIEFGDEICAMNAIQHMNG 23853 >gi|325185797|emb|FR824136.1| Albugo laibachii Nc14, genomic contig CONTIG_91_NC14_v4_82899_205 Length = 82899 Score = 29.6 bits (65), Expect = 2.6 Identities = 26/79 (32%), Positives = 32/79 (40%), Gaps = 1/79 (1%) Frame = -1 Query: 98 LFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLD-PTGVSKGYGFVKFTDELEQKRALTE 156 LFV L D F K Y G + D TG SKG+GFV + RAL + Sbjct: 15891 LFVRGLAWITSDETFRREFEK-YGDIEGASIARDRKTGKSKGFGFVTYRSNASAHRALQQ 15715 Query: 157 CQGAVGLGCKPVRLSVAIP 175 Q + V S+ IP Sbjct: 15714 PQKII-----DVTRSIRIP 15673 >gi|325191557|emb|FR824371.1| Albugo laibachii Nc14, genomic contig CONTIG_326_NC14_v4_28326_152 Length = 28326 Score = 29.6 bits (65), Expect = 2.6 Identities = 26/79 (32%), Positives = 32/79 (40%), Gaps = 1/79 (1%) Frame = +3 Query: 98 LFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLD-PTGVSKGYGFVKFTDELEQKRALTE 156 LFV L D F K Y G + D TG SKG+GFV + RAL + Sbjct: 9411 LFVRGLAWITSDETFRREFEK-YGDIEGASIARDRKTGKSKGFGFVTYRSNASAHRALQQ 9587 Query: 157 CQGAVGLGCKPVRLSVAIP 175 Q + V S+ IP Sbjct: 9588 PQKII-----DVTRSIRIP 9629 >gi|325183108|emb|FR824082.1| Albugo laibachii Nc14, genomic contig CONTIG_37_NC14_v4_136865_253 Length = 136865 Score = 29.3 bits (64), Expect = 3.4 Identities = 18/62 (29%), Positives = 29/62 (46%) Frame = -1 Query: 5 LWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHK 64 L++ L P + + + AF G ++IR+ TG Y FVEF + E+ K Sbjct: 77087 LFVCKLNPVTESSDLDMAFCRFG--ACKSEVIRDFKTGDSLCYAFVEFTEKKHCEEAYFK 76914 Query: 65 IN 66 +N Sbjct: 76913 MN 76908 >gi|325185948|emb|FR824140.1| Albugo laibachii Nc14, genomic contig CONTIG_95_NC14_v4_80841_235 Length = 80841 Score = 27.7 bits (60), Expect = 10.0 Identities = 11/21 (52%), Positives = 17/21 (80%) Frame = +3 Query: 135 VSKGYGFVKFTDELEQKRALT 155 +S G+GFV+F DE + +RAL+ Sbjct: 74946 LSMGFGFVEFADENDAQRALS 75008 Database: A.laibachii_Nc14/genome.fa Posted date: Nov 21, 2011 7:46 PM Number of letters in database: 32,740,139 Number of sequences in database: 3816 Lambda K H 0.317 0.135 0.412 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 8,545,834 Number of Sequences: 3816 Number of extensions: 97624 Number of successful extensions: 436 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 178 Number of HSP's successfully gapped in prelim test: 19 Number of HSP's that attempted gapping in prelim test: 208 Number of HSP's gapped (non-prelim): 277 length of query: 287 length of database: 10,913,379 effective HSP length: 99 effective length of query: 188 effective length of database: 10,535,595 effective search space: 1980691860 effective search space used: 1980691860 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 60 (27.7 bits)