TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|8923460|ref|NP_060316.1| tRNA selenocysteine 1-associated protein 1 [Homo sapiens] (287 letters) Database: F.cylindrus/genome.fa 271 sequences; 80,540,407 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value scaffold_11 60 6e-09 scaffold_182 59 1e-08 scaffold_3 58 2e-08 scaffold_80 54 3e-07 scaffold_5 54 3e-07 scaffold_215 42 0.001 scaffold_9 42 0.001 scaffold_42 37 0.053 scaffold_2 36 0.069 scaffold_15 35 0.12 scaffold_6 35 0.12 scaffold_10 35 0.15 scaffold_4 35 0.15 scaffold_84 33 0.45 scaffold_93 33 0.76 scaffold_1 33 0.76 scaffold_41 31 2.9 scaffold_23 30 4.9 scaffold_69 30 6.5 scaffold_60 30 6.5 scaffold_26 30 6.5 scaffold_86 29 8.4 scaffold_13 29 8.4 >scaffold_11 Length = 1700871 Score = 59.7 bits (143), Expect = 6e-09 Identities = 44/159 (27%), Positives = 80/159 (50%), Gaps = 1/159 (0%) Frame = +3 Query: 2 AASLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKC 61 +ASL++GDL +E + F +G V S+++ R+ +T GY +V + L+ AE+ Sbjct: 1494138 SASLYVGDLATDANEALLFEIFNAVGP-VASIRVCRDAVTRRSLGYAYVNYHQLSDAERA 1494314 Query: 62 LHKINGKPLPGATPAKRFKLNYATYGKQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYP 121 L +N + +K ++ ++ S ++FV +L +D+ LY+ F ++ Sbjct: 1494315 LDTMNFSMIK----SKPCRIMWSQRDPSLRRSGAGNIFVKNLHESIDNKQLYDTF-SLFG 1494479 Query: 122 SCRGGKVVLD-QTGVSKGYGFVKFTDELEQKRALTECQG 159 + KVV D +TG SKGYG+V + A+ + G Sbjct: 1494480 NILSCKVVTDRETGGSKGYGYVHYETVEAANAAIEKLDG 1494596 >scaffold_182 Length = 7967 Score = 58.9 bits (141), Expect = 1e-08 Identities = 49/182 (26%), Positives = 88/182 (48%), Gaps = 8/182 (4%) Frame = -2 Query: 3 ASLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCL 62 A++++ +L+ + + FA +G+ V S+ + +++TG GY FVEF D+ A+ + Sbjct: 3901 ATVYVANLDYACTQTVLLELFAQVGK-VKSIYMPTDKITGSHNGYGFVEFTDVLDADYAI 3725 Query: 63 HKIN-----GKPLPGATPAKRFKLNYATYGKQPDNSPEYSLFVGDLTP-DVDDGMLYEFF 116 +N +PL + R ++ + +LF+G+L P DVD+ +LY+ F Sbjct: 3724 QILNMIKFYDRPLKLGKSSLR-----SSKAELWSKDVGANLFIGNLDPIDVDEHLLYDTF 3560 Query: 117 VKVYPSCRGGKVVLD--QTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAI 174 + K++ + T SKG+GFV F D E EC + L S+ + + A Sbjct: 3559 SSFGTLLKQPKIMREDNDTNDSKGFGFVSF-DNFESSDTAIECMNSQFLCSRQIIVQYAF 3383 Query: 175 PK 176 K Sbjct: 3382 KK 3377 >scaffold_3 Length = 3437899 Score = 57.8 bits (138), Expect = 2e-08 Identities = 45/159 (28%), Positives = 80/159 (50%), Gaps = 1/159 (0%) Frame = -1 Query: 2 AASLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKC 61 +ASL++GDL +E + F +G V S+++ R+ +T GY +V + L+ AE+ Sbjct: 3382552 SASLYVGDLATDANEALLFEIFNAVGP-VASIRVCRDAVTRRSLGYAYVNYHQLSDAERA 3382376 Query: 62 LHKINGKPLPGATPAKRFKLNYATYGKQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYP 121 L +N + + P + G++ S ++FV +L +D+ LY+ F ++ Sbjct: 3382375 LDTMNFSMIK-SKPCRGVWSQRDPSGRR---SGAGNIFVKNLHESIDNKQLYDTF-SLFG 3382211 Query: 122 SCRGGKVVLD-QTGVSKGYGFVKFTDELEQKRALTECQG 159 + KVV D +TG SKGYG+V + A+ + G Sbjct: 3382210 NILSCKVVTDRETGGSKGYGYVHYETVEAANAAIEKLDG 3382094 Score = 31.6 bits (70), Expect = 1.7 Identities = 18/51 (35%), Positives = 30/51 (58%) Frame = +3 Query: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFAD 54 SL + ++ P + N + +AF +GE V V I R+ + P G+ F+E+AD Sbjct: 1324929 SLLVRNIGPSISNNDLIQAFGRIGE-VRDVYIPRDYHSQQPKGFAFIEYAD 1325078 >scaffold_80 Length = 209277 Score = 53.9 bits (128), Expect = 3e-07 Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 2/89 (2%) Frame = -3 Query: 84 ATYGKQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLD--QTGVSKGYGF 141 +T + P N ++ LFVG+L DV D L++ F Y S K++ D + SKG+GF Sbjct: 62689 STLSEWPAN--DFRLFVGNLGADVSDEALFDHFSSKYASVAMSKIIRDAKKNKESKGFGF 62516 Query: 142 VKFTDELEQKRALTECQGAVGLGSKPVRL 170 V F L+ +A+ E Q LGS+P+R+ Sbjct: 62515 VSFLQPLDCAKAMRE-QDQTWLGSRPIRV 62432 >scaffold_5 Length = 3184085 Score = 53.9 bits (128), Expect = 3e-07 Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 2/89 (2%) Frame = -2 Query: 84 ATYGKQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLD--QTGVSKGYGF 141 +T + P N ++ LFVG+L DV D L++ F Y S K++ D + SKG+GF Sbjct: 2695423 STLSEWPAN--DFRLFVGNLGADVSDEALFDHFSSKYASVAMSKIIRDAKKNKESKGFGF 2695250 Query: 142 VKFTDELEQKRALTECQGAVGLGSKPVRL 170 V F L+ +A+ E Q LGS+P+R+ Sbjct: 2695249 VSFLQPLDCAKAMRE-QDQTWLGSRPIRV 2695166 >scaffold_215 Length = 4189 Score = 42.0 bits (97), Expect = 0.001 Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 5/86 (5%) Frame = +3 Query: 98 LFVGDLTPDVDDGMLYEFFVKVYPSCR----GGKVVLD-QTGVSKGYGFVKFTDELEQKR 152 +F+G+L + DD L F + R KV+ + +TG SKGYGFV+FTD + Sbjct: 2472 VFIGNLAFETDDTQLGNFILDTMGQSRMVLHSFKVIREWKTGKSKGYGFVEFTDPIYATV 2651 Query: 153 ALTECQGAVGLGSKPVRLSVAIPKAS 178 + C G L + VRL K S Sbjct: 2652 CMDVCNGK-KLNGRQVRLDQGKKKDS 2726 Score = 41.6 bits (96), Expect = 0.002 Identities = 32/79 (40%), Positives = 43/79 (54%), Gaps = 3/79 (3%) Frame = +3 Query: 25 TMGETVM---SVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKL 81 TMG++ M S K+IR TG GY FVEF D A C+ NGK L G ++ +L Sbjct: 2535 TMGQSRMVLHSFKVIREWKTGKSKGYGFVEFTDPIYATVCMDVCNGKKLNG----RQVRL 2702 Query: 82 NYATYGKQPDNSPEYSLFV 100 + GK+ D S E+ LF+ Sbjct: 2703 D---QGKKKD-SEEHQLFL 2747 >scaffold_9 Length = 2734635 Score = 42.0 bits (97), Expect = 0.001 Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 5/86 (5%) Frame = +3 Query: 98 LFVGDLTPDVDDGMLYEFFVKVYPSCR----GGKVVLD-QTGVSKGYGFVKFTDELEQKR 152 +F+G+L + DD L F + R KV+ + +TG SKGYGFV+FTD + Sbjct: 551544 VFIGNLAFETDDTQLGNFILDTMGQSRMVLHSFKVIREWKTGKSKGYGFVEFTDPIYATV 551723 Query: 153 ALTECQGAVGLGSKPVRLSVAIPKAS 178 + C G L + VRL K S Sbjct: 551724 CMDVCNGK-KLNGRQVRLDQGKKKDS 551798 Score = 41.6 bits (96), Expect = 0.002 Identities = 32/79 (40%), Positives = 43/79 (54%), Gaps = 3/79 (3%) Frame = +3 Query: 25 TMGETVM---SVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKL 81 TMG++ M S K+IR TG GY FVEF D A C+ NGK L G ++ +L Sbjct: 551607 TMGQSRMVLHSFKVIREWKTGKSKGYGFVEFTDPIYATVCMDVCNGKKLNG----RQVRL 551774 Query: 82 NYATYGKQPDNSPEYSLFV 100 + GK+ D S E+ LF+ Sbjct: 551775 D---QGKKKD-SEEHQLFL 551819 >scaffold_42 Length = 477099 Score = 36.6 bits (83), Expect = 0.053 Identities = 23/83 (27%), Positives = 43/83 (51%) Frame = -1 Query: 77 KRFKLNYATYGKQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQTGVS 136 +R +LN GK P + +Y ++VG+++ + L+ F ++ P +VLD G Sbjct: 188676 ERIQLNIKE-GKHPKHFGDYKMYVGNISFQCTEEDLFNKFSEIGP-VGDVSMVLDNDGRI 188503 Query: 137 KGYGFVKFTDELEQKRALTECQG 159 +G+GF+ + + +RAL G Sbjct: 188502 RGFGFITMRNAEDGERALELLDG 188434 >scaffold_2 Length = 3822992 Score = 36.2 bits (82), Expect = 0.069 Identities = 51/194 (26%), Positives = 87/194 (44%), Gaps = 28/194 (14%) Frame = -2 Query: 5 LWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCL-- 62 L++G+L +DE+ + F GE V +K I ++ TG G F+E + +A + Sbjct: 1161634 LFLGNLPFSVDESSLGAFFP--GE-VTHIKWITDKETGKFYGSAFIEMDNSTSAADAVAM 1161464 Query: 63 --HKINGKPLPGA----------TPAKRFKLNYATYGKQ------------PDNSPEYSL 98 K+ G+PL P K+ +T G Q PD+ L Sbjct: 1161463 AGSKLIGRPLKINFAEAREGDVWPPPKKVISGGSTTGGQAGGTGTKAMSAKPDDC--LKL 1161290 Query: 99 FVGDLTPDVDDGMLYEFFVKVYPSCRGGK-VVLDQTGVSKGYGFVKF-TDELEQKRALTE 156 F+G+L+ D+DD + +FF V + + + ++G KG GFV+F E +K A Sbjct: 1161289 FIGNLSYDIDDEGIIKFFGTVDAEVKAVRWLHHKESGDFKGCGFVEFWKTEACEKGATLN 1161110 Query: 157 CQGAVGLGSKPVRL 170 + +G +P+R+ Sbjct: 1161109 GKNLLG---RPIRI 1161077 >scaffold_15 Length = 1348792 Score = 35.4 bits (80), Expect = 0.12 Identities = 20/68 (29%), Positives = 32/68 (47%) Frame = -2 Query: 16 ENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATP 75 E I AF G + S+ + +R TG+ GY VE+ + A+ ++ ++GK L G Sbjct: 758328 EEDIREAFCDYGR-IKSIVLNADRKTGLAKGYALVEYMERNEAQDAINALHGKSLMGKKI 758152 Query: 76 AKRFKLNY 83 F Y Sbjct: 758151 GVSFAFGY 758128 >scaffold_6 Length = 2967614 Score = 35.4 bits (80), Expect = 0.12 Identities = 20/68 (29%), Positives = 32/68 (47%) Frame = +3 Query: 16 ENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATP 75 E I AF G + S+ + +R TG+ GY VE+ + A+ ++ ++GK L G Sbjct: 409926 EEDIREAFCDYGR-IKSIVLNADRKTGLAKGYALVEYMERNEAQDAINALHGKSLMGKKI 410102 Query: 76 AKRFKLNY 83 F Y Sbjct: 410103 GVSFAFGY 410126 Score = 29.3 bits (64), Expect = 8.4 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 1/75 (1%) Frame = -3 Query: 97 SLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALT 155 +LFV L D+ D L F + + KV +D+ T SKG+GFV + + + A+ Sbjct: 2391810 NLFVYHLPHDLTDADLATAF-NPFGNVISAKVYVDRYTDESKGFGFVSYDSVISAESAIE 2391634 Query: 156 ECQGAVGLGSKPVRL 170 + G +G+K +++ Sbjct: 2391633 QMNG-FQIGNKRLKV 2391592 >scaffold_10 Length = 1906272 Score = 35.0 bits (79), Expect = 0.15 Identities = 39/142 (27%), Positives = 62/142 (43%), Gaps = 7/142 (4%) Frame = -2 Query: 42 GIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYAT-----YGKQPDNSPE- 95 G +G +EF D A A ++NG G + + Y+T + P + E Sbjct: 215528 GRSSGTAVLEFGD-ADAAAAAMELNGADFDG----RWLSIKYSTPKPIGSARAPSDKQEG 215364 Query: 96 -YSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRAL 154 ++FVG+L+ D+D+ L E F + +TG KGYG V+F +E E A Sbjct: 215363 CVTIFVGNLSWDIDEDSLREAFKGCGTITQVRFSTDRETGDFKGYGHVEF-EETEATDAA 215187 Query: 155 TECQGAVGLGSKPVRLSVAIPK 176 + G + + VR+ A K Sbjct: 215186 VQMAG-TDICGRAVRVDYANDK 215124 >scaffold_4 Length = 3206981 Score = 35.0 bits (79), Expect = 0.15 Identities = 39/142 (27%), Positives = 62/142 (43%), Gaps = 7/142 (4%) Frame = -1 Query: 42 GIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYAT-----YGKQPDNSPE- 95 G +G +EF D A A ++NG G + + Y+T + P + E Sbjct: 1145744 GRSSGTAVLEFGD-ADAAAAAMELNGADFDG----RWLSIKYSTPKPIGSARAPSDKQEG 1145580 Query: 96 -YSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRAL 154 ++FVG+L+ D+D+ L E F + +TG KGYG V+F +E E A Sbjct: 1145579 CVTIFVGNLSWDIDEDSLREAFKGCGTITQVRFSTDRETGDFKGYGHVEF-EETEATDAA 1145403 Query: 155 TECQGAVGLGSKPVRLSVAIPK 176 + G + + VR+ A K Sbjct: 1145402 VQMAG-TDICGRAVRVDYANDK 1145340 >scaffold_84 Length = 177237 Score = 33.5 bits (75), Expect = 0.45 Identities = 34/133 (25%), Positives = 54/133 (40%) Frame = -2 Query: 14 MDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGA 73 + E+ F GE + + ++ TG+P G+ FV + D A + K+ K Sbjct: 9863 ISESEFREFFGQFGE-LQDAMVKFDQNTGLPRGFGFVTYVDPEIAT-FVTKLGDKREGYG 9690 Query: 74 TPAKRFKLNYATYGKQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQT 133 R K K N LFVG L D+ + L +FF + +V + Sbjct: 9689 RLVMRGKTCEIKAHKDNRNK----LFVGGLPMDISNHELRDFFQQFGTVVDSIVMVHKEN 9522 Query: 134 GVSKGYGFVKFTD 146 V +G+GFV F + Sbjct: 9521 NVPRGFGFVTFAE 9483 >scaffold_93 Length = 155441 Score = 32.7 bits (73), Expect = 0.76 Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 3/53 (5%) Frame = -2 Query: 98 LFVGDLTPDVDDGMLYEF---FVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDE 147 L+VG L D ++ L F F KVY +CR + + +TG +KG+ FV+F D+ Sbjct: 146020 LYVGHLPKDFEEIDLRRFLSQFGKVY-NCRVARKI--ETGKTKGFAFVRFGDD 145871 Score = 32.7 bits (73), Expect = 0.76 Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 3/53 (5%) Frame = -3 Query: 98 LFVGDLTPDVDDGMLYEF---FVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDE 147 L+VG L D ++ L F F KVY +CR + + +TG +KG+ FV+F D+ Sbjct: 142044 LYVGHLPKDFEEIDLRRFLSQFGKVY-NCRVARKI--ETGKTKGFAFVRFGDD 141895 >scaffold_1 Length = 5926375 Score = 32.7 bits (73), Expect = 0.76 Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 3/53 (5%) Frame = +3 Query: 98 LFVGDLTPDVDDGMLYEF---FVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDE 147 L+VG L D ++ L F F KVY +CR + + +TG +KG+ FV+F D+ Sbjct: 1349931 LYVGHLPKDFEEIDLRRFLSQFGKVY-NCRVARKI--ETGKTKGFAFVRFGDD 1350080 >scaffold_41 Length = 550327 Score = 30.8 bits (68), Expect = 2.9 Identities = 22/72 (30%), Positives = 33/72 (45%) Frame = +1 Query: 88 KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDE 147 + P +S SL+VG+L+ D L + F K Y +V G S G+G V F+D Sbjct: 493339 RNPSSSSSSSLYVGNLSYDCTWQDLKDAF-KRYGHVSHAEVCETAGGKSTGFGIVLFSDG 493515 Query: 148 LEQKRALTECQG 159 +A+ G Sbjct: 493516 KSATKAMDSMDG 493551 >scaffold_23 Length = 885465 Score = 30.0 bits (66), Expect = 4.9 Identities = 21/69 (30%), Positives = 30/69 (43%) Frame = -3 Query: 93 SPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKR 152 +PE LFV L P +D L F + + V +TG S Y FV+FT + Sbjct: 842335 APENVLFVCKLNPVTEDDDLDLIFSRFDEKVKADIVRDSKTGASLQYAFVEFTTKERATE 842156 Query: 153 ALTECQGAV 161 A + A+ Sbjct: 842155 AYFKMNNAL 842129 Score = 29.6 bits (65), Expect = 6.5 Identities = 18/62 (29%), Positives = 30/62 (48%) Frame = -3 Query: 5 LWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHK 64 L++ L P +++ + F+ E V + I+R+ TG Y FVEF A + K Sbjct: 842320 LFVCKLNPVTEDDDLDLIFSRFDEKVKA-DIVRDSKTGASLQYAFVEFTTKERATEAYFK 842144 Query: 65 IN 66 +N Sbjct: 842143 MN 842138 >scaffold_69 Length = 326134 Score = 29.6 bits (65), Expect = 6.5 Identities = 15/59 (25%), Positives = 30/59 (50%) Frame = +2 Query: 88 KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTD 146 +Q ++ +FVG+L + + L+ F ++ + V +TG +G+ FV+F D Sbjct: 100970 QQSQQQQKHDIFVGNLAFNTTEEQLHTTFSEIGRVIKVRMVTDVETGKPRGFAFVEFED 101146 >scaffold_60 Length = 345724 Score = 29.6 bits (65), Expect = 6.5 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = +3 Query: 89 QPDNSPEYSLFVGDLTPDVDDGMLYEF 115 Q D PE LFVG++ D+DD L F Sbjct: 5544 QTDVPPERELFVGNIPSDIDDKFLLHF 5624 >scaffold_26 Length = 868567 Score = 29.6 bits (65), Expect = 6.5 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = +3 Query: 89 QPDNSPEYSLFVGDLTPDVDDGMLYEF 115 Q D PE LFVG++ D+DD L F Sbjct: 613071 QTDVPPERELFVGNIPSDIDDKFLLHF 613151 >scaffold_86 Length = 153064 Score = 29.3 bits (64), Expect = 8.4 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 1/75 (1%) Frame = -3 Query: 97 SLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALT 155 +LFV L D+ D L F + + KV +D+ T SKG+GFV + + + A+ Sbjct: 105935 NLFVYHLPHDLTDADLATAF-NPFGNVISAKVYVDRYTDESKGFGFVSYDSVISAESAIE 105759 Query: 156 ECQGAVGLGSKPVRL 170 + G +G+K +++ Sbjct: 105758 QMNG-FQIGNKRLKV 105717 >scaffold_13 Length = 1481013 Score = 29.3 bits (64), Expect = 8.4 Identities = 15/59 (25%), Positives = 30/59 (50%) Frame = +3 Query: 88 KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTD 146 +Q ++ +FVG+L + + L+ F ++ + V +TG +G+ FV+F D Sbjct: 1428000 QQSQQQQKHDIFVGNLAFNTTEEQLHTNFSEIGRVIKVRMVTDVETGKPRGFAFVEFED 1428176 Database: F.cylindrus/genome.fa Posted date: Nov 21, 2011 7:46 PM Number of letters in database: 80,540,407 Number of sequences in database: 271 Lambda K H 0.317 0.135 0.406 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 18,783,594 Number of Sequences: 271 Number of extensions: 206965 Number of successful extensions: 791 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 20 Number of HSP's successfully gapped in prelim test: 20 Number of HSP's that attempted gapping in prelim test: 656 Number of HSP's gapped (non-prelim): 293 length of query: 287 length of database: 26,846,802 effective HSP length: 105 effective length of query: 182 effective length of database: 26,818,347 effective search space: 4880939154 effective search space used: 4880939154 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 63 (28.9 bits)