TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|224465209|ref|NP_699167.2| L-seryl-tRNA(Sec) kinase [Homo sapiens] (348 letters) Database: L.tarentolae/genome.fa 7267 sequences; 31,598,840 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Lt_contig6279 | | 1 to 14002 35 0.076 Lt_contig4811 | | 1 to 2158 33 0.22 Lt_contig495 | | 1 to 25921 32 0.64 Lt_contig1541 | | 1 to 10501 32 0.84 Lt_contig5262 | | 1 to 11693 30 1.9 Lt_contig4824 | | 1 to 14951 30 1.9 Lt_contig1537 | | 1 to 17657 30 2.5 Lt_contig4506 | | 1 to 17484 30 2.5 Lt_contig6429 | | 1 to 14642 30 3.2 Lt_contig5603 | | 1 to 6823 29 5.5 Lt_contig6470 | | 1 to 7534 28 7.1 Lt_contig6060 | | 1 to 13823 28 7.1 Lt_contig331 | | 1 to 7609 28 7.1 Lt_contig1331 | | 1 to 6330 28 9.3 Lt_contig989 | | 1 to 13477 28 9.3 >Lt_contig6279 | | 1 to 14002 Length = 14002 Score = 35.0 bits (79), Expect = 0.076 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 1/93 (1%) Frame = -2 Query: 23 LCGLPAAGKSTFARALAHRLQQEQGWAIGVVAYDDVMPDAFLAGARARPAPSQWKLLRQE 82 LCG P GK++F +ALA L++ ++ VV+ D+ + E Sbjct: 9834 LCGAPGTGKTSFVKALARHLRR----SLVVVSMSDI-------------------ITVNE 9724 Query: 83 LLKYLEYFLMAVI-NGCQMSVPPNRTEAMWEDF 114 L + L+ F M + G +SV PN++ ++EDF Sbjct: 9723 LRQILQPFEMDIEGGGVPLSVLPNQSVYVFEDF 9625 >Lt_contig4811 | | 1 to 2158 Length = 2158 Score = 33.5 bits (75), Expect = 0.22 Identities = 18/54 (33%), Positives = 29/54 (53%) Frame = -3 Query: 65 AGARARPAPSQWKLLRQELLKYLEYFLMAVINGCQMSVPPNRTEAMWEDFITCL 118 AG A A + ++ RQELL+YLE+F ++V+ Q + A W + C+ Sbjct: 1397 AGRNAEEASRRVEMFRQELLRYLEHFFLSVM---QHLAGSSANAAEWSRDLRCI 1245 >Lt_contig495 | | 1 to 25921 Length = 25921 Score = 32.0 bits (71), Expect = 0.64 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%) Frame = +3 Query: 194 PQALPPETIHLMGRKLEKPNPEKNAW--EHNSLTIPSPAC 231 P A PP H M R+ P PEK W +S + +PAC Sbjct: 14277 PSACPPSRCHPMWRRQ*APLPEKTCWATPRSSPAMSAPAC 14396 >Lt_contig1541 | | 1 to 10501 Length = 10501 Score = 31.6 bits (70), Expect = 0.84 Identities = 19/69 (27%), Positives = 35/69 (50%) Frame = -1 Query: 188 QRNGQRPQALPPETIHLMGRKLEKPNPEKNAWEHNSLTIPSPACASEASLEVTDLLLTAL 247 +R+ + PQALP T +G+K P P A H+S+ +P+ + S E + + A Sbjct: 6511 ERHHRPPQALPLHTAVHLGKK---PRPSTRAQTHHSVG*KTPSETASHSPERASVAVRAA 6341 Query: 248 ENPVKYAED 256 P++ ++ Sbjct: 6340 AQPLRIEQE 6314 >Lt_contig5262 | | 1 to 11693 Length = 11693 Score = 30.4 bits (67), Expect = 1.9 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = -3 Query: 22 VLCGLPAAGKSTFARALAHRL 42 VLCGLP AGKST + AL+ L Sbjct: 10032 VLCGLPGAGKSTLSVALSRLL 9970 >Lt_contig4824 | | 1 to 14951 Length = 14951 Score = 30.4 bits (67), Expect = 1.9 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = -3 Query: 22 VLCGLPAAGKSTFARALAHRL 42 VLCGLP AGKST + AL+ L Sbjct: 13290 VLCGLPGAGKSTLSVALSRLL 13228 >Lt_contig1537 | | 1 to 17657 Length = 17657 Score = 30.0 bits (66), Expect = 2.5 Identities = 17/57 (29%), Positives = 26/57 (45%) Frame = +2 Query: 188 QRNGQRPQALPPETIHLMGRKLEKPNPEKNAWEHNSLTIPSPACASEASLEVTDLLL 244 +R GQ PP+ +H G+K + A H S +P +C ++ T LLL Sbjct: 10355 KRGGQSADEPPPKGLHTTGKK-KTGKTNGRAHTHRSYMLPGTSCVTQLFTWTTLLLL 10522 >Lt_contig4506 | | 1 to 17484 Length = 17484 Score = 30.0 bits (66), Expect = 2.5 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = +1 Query: 162 EVYQLARKYSLGFCQLFLDCPLETCLQRNGQRPQALPP 199 E+YQ +++ F + L C TCLQ G+RP + PP Sbjct: 1018 EIYQRTTQFA*TFEEKLLACASLTCLQ--GRRPSSTPP 1125 >Lt_contig6429 | | 1 to 14642 Length = 14642 Score = 29.6 bits (65), Expect = 3.2 Identities = 14/28 (50%), Positives = 17/28 (60%) Frame = -3 Query: 58 VMPDAFLAGARARPAPSQWKLLRQELLK 85 V+PDA A R AP WK+LR LL+ Sbjct: 5811 VLPDAPCATTRRLAAPQSWKVLRCRLLR 5728 >Lt_contig5603 | | 1 to 6823 Length = 6823 Score = 28.9 bits (63), Expect = 5.5 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = +1 Query: 193 RPQALPPETIHLMGRKLEKPNPEKNAWEHN 222 RP+ PP L+G +L K NPE+ W+H+ Sbjct: 853 RPETPPPRA-GLIGERLRK-NPERQGWQHH 936 >Lt_contig6470 | | 1 to 7534 Length = 7534 Score = 28.5 bits (62), Expect = 7.1 Identities = 17/65 (26%), Positives = 28/65 (43%) Frame = -2 Query: 54 AYDDVMPDAFLAGARARPAPSQWKLLRQELLKYLEYFLMAVINGCQMSVPPNRTEAMWED 113 +Y+ V D A R AP +LLR + L + A +NG + + R ++ D Sbjct: 5790 SYNGVHVDLLFASVNMRTAPDTNELLRDDFLSLVSLPCRATVNGIRTILEIRRRLSLPLD 5611 Query: 114 FITCL 118 C+ Sbjct: 5610 AYACV 5596 >Lt_contig6060 | | 1 to 13823 Length = 13823 Score = 28.5 bits (62), Expect = 7.1 Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 1/49 (2%) Frame = -3 Query: 293 GNQEAFS-EMTFKQRWVRANHAAIWRIILGNEHIKCRSAKVGWLQCCRI 340 G QE F F QRW + + N H C S + GWL CR+ Sbjct: 1158 GYQEVFDCNERFSQRWAISQRGTL------NNHCPCHSNRRGWL--CRV 1036 >Lt_contig331 | | 1 to 7609 Length = 7609 Score = 28.5 bits (62), Expect = 7.1 Identities = 26/78 (33%), Positives = 34/78 (43%), Gaps = 22/78 (28%) Frame = -1 Query: 138 TKTAVSRPLFLVLDDNFYYQSMRYEVYQ----LARKYSL---------------GFCQLF 178 T+ AV +F+ +DN +Y+SMR Y+ L R+Y L F LF Sbjct: 6916 TENAVVPMVFV--EDNMHYRSMRERYYRMCRTLEREYFLPSPHSDPTAAAQLQQNFIVLF 6743 Query: 179 ---LDCPLETCLQRNGQR 193 PL CL RN QR Sbjct: 6742 ELRFATPLAVCLARNAQR 6689 >Lt_contig1331 | | 1 to 6330 Length = 6330 Score = 28.1 bits (61), Expect = 9.3 Identities = 10/19 (52%), Positives = 14/19 (73%) Frame = +2 Query: 213 NPEKNAWEHNSLTIPSPAC 231 NP+ + H+SL+IPSP C Sbjct: 3971 NPDSSLVRHHSLSIPSPCC 4027 >Lt_contig989 | | 1 to 13477 Length = 13477 Score = 28.1 bits (61), Expect = 9.3 Identities = 11/29 (37%), Positives = 18/29 (62%) Frame = +3 Query: 155 YYQSMRYEVYQLARKYSLGFCQLFLDCPL 183 ++ S++YE Y + + G C LF +CPL Sbjct: 4803 FFFSIQYENYSVRLVLTRGQCALFFNCPL 4889 Database: L.tarentolae/genome.fa Posted date: Nov 21, 2011 7:46 PM Number of letters in database: 31,598,840 Number of sequences in database: 7267 Lambda K H 0.321 0.134 0.417 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 17,945,523 Number of Sequences: 7267 Number of extensions: 330981 Number of successful extensions: 2177 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 1548 Number of HSP's successfully gapped in prelim test: 85 Number of HSP's that attempted gapping in prelim test: 503 Number of HSP's gapped (non-prelim): 1824 length of query: 348 length of database: 10,532,946 effective HSP length: 101 effective length of query: 247 effective length of database: 9,798,979 effective search space: 2420347813 effective search space used: 2420347813 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 61 (28.1 bits)