TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SPP00000038_1.0 # Protein # Eukaryotic elongation factor (eEFSec) # Homo sapiens # Complete (596 letters) Database: I.multifiliis_strain_G5/genome.fa 2017 sequences; 48,799,969 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|340502432|gb|GL984181.1| Ichthyophthirius multifiliis unplace... 118 8e-50 gi|340502060|gb|GL984210.1| Ichthyophthirius multifiliis unplace... 76 1e-13 gi|340506248|gb|GL983673.1| Ichthyophthirius multifiliis unplace... 59 1e-08 gi|340508484|gb|GL983184.1| Ichthyophthirius multifiliis unplace... 46 1e-04 gi|340506843|gb|GL983551.1| Ichthyophthirius multifiliis unplace... 39 0.017 gi|340502006|gb|GL984212.1| Ichthyophthirius multifiliis unplace... 38 0.038 gi|340503223|gb|GL984102.1| Ichthyophthirius multifiliis unplace... 36 0.14 gi|340505879|gb|GL983770.1| Ichthyophthirius multifiliis unplace... 31 4.6 >gi|340502432|gb|GL984181.1| Ichthyophthirius multifiliis unplaced genomic scaffold scaff_1120509251220, whole genome shotgun sequence Length = 143409 Score = 118 bits (295), Expect(2) = 8e-50 Identities = 74/169 (43%), Positives = 93/169 (55%), Gaps = 2/169 (1%) Frame = -3 Query: 140 KLVVVLNKIDLL-PEGKRQAAIDKMTKKMQKTLENTKFR-GAPIIPVXXXXXXXXXXXXX 197 KL+VVLNKID + P KR+ I K + +QK TKF PIIPV Sbjct: 33154 KLIVVLNKIDTI*PIEKREEIIIKKKE*LQKVF*KTKFG*NVPIIPVSAVENENKNM*L- 32978 Query: 198 XXXXIPELIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVE 257 LI+ L I IP R+ GPF +DHCF IKG+G+V+TGT++ GS + G VE Sbjct: 32977 -------LIDCLLD*IEIPKRNKDGPFYFLIDHCFPIKGKGSVITGTVI*GSHTSG*EVE 32819 Query: 258 IPALKVVKKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERGLVCAP 306 P +K KK KSMQMF P+ + GDR I T D L+ERG+ C P Sbjct: 32818 FPLIK*TKKSKSMQMFKKPVN*II*GDRAAILFT*LDHNLIERGIACTP 32672 Score = 105 bits (262), Expect = 1e-22 Identities = 67/139 (48%), Positives = 77/139 (55%), Gaps = 1/139 (0%) Frame = -1 Query: 13 LGHIDSGKXXXXXXXXXXXXXXXFDKQPQSRERGITLDLGFSCFSVPLPARLRSSXXXXX 72 LGHIDSGK DK P S ERGITLDLGFS F P + R Sbjct: 33546 LGHIDSGKTSLSKALSKITSTASLDKNP*S*ERGITLDLGFSAFFTRNPEKFRE*LKAEY 33367 Query: 73 XXXXXXXXXXXXXXQVTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLV 132 TLVDCPGHASLI+TI+GGA IID+M LVID+ KG+ T +AECLV Sbjct: 33366 L*F-------------TLVDCPGHASLIKTILGGASIIDIMFLVIDINKGI*T*TAECLV 33226 Query: 133 IGQIACQKLVVV-LNKIDL 150 IG +K+V + L KI L Sbjct: 33225 IGNFFIKKIVFL*L*KIQL 33169 Score = 99.4 bits (246), Expect(2) = 8e-50 Identities = 73/236 (30%), Positives = 115/236 (48%), Gaps = 18/236 (7%) Frame = -1 Query: 319 VEKIPYFRGPLQTKAKFHITVGHETVMGRLMFFSPAPD--------------NFDQEPIL 364 V K+ YF+ P+++K K+HIT H T MG + F + NFD+ Sbjct: 32595 VNKVNYFKYPIKSKGKYHITTCHFTCMGSIKLFKHEINIEE*KELESIKVNINFDEGGKK 32416 Query: 365 DS---FNFSQEYLFQEQYLSKDLTPAVTDNDEADKKAGQATEGHCPRQQWALVEFEKPVT 421 F+F++ Y + E Y D KKA + +AL+EFEK + Sbjct: 32415 KGGYIFDFNK*YEYVECY----------DEYI**KKADE*L--------FALIEFEKEMY 32290 Query: 422 CPRLCLVIGSRLDADIHTNTCRLAFHGILLHGLEDRNYADSFLPRLKVYKLKHKHGLVER 481 L I S+ D D+ +N CRL F+G L L ++ +LK+++ K + G VE+ Sbjct: 32289 ASAGTLFICSKFDTDVSSNLCRLGFYGNALVALVQGDFNKD--KKLKIFREKTREGTVEK 32116 Query: 482 AMDDYSVIGRSLFKKETNIQLFVGLKVHLST-GELGIIDSAFGQSGKFKIHIPGGL 536 D +++I + +FKKET I+LF+ +++ G +G I AFG+SGK K G+ Sbjct: 32115 VCDGFTIIIKDMFKKETKIELFLNKSIYIENFGNVGKI*CAFGKSGKIKALFSNGI 31948 >gi|340502060|gb|GL984210.1| Ichthyophthirius multifiliis unplaced genomic scaffold scaff_1120509251249, whole genome shotgun sequence Length = 34306 Score = 75.9 bits (185), Expect = 1e-13 Identities = 53/216 (24%), Positives = 107/216 (49%), Gaps = 4/216 (1%) Frame = -1 Query: 91 VDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQ-IACQKLVVVLNKID 149 VDCPGH ++ +I GA +D +LV T G+ + E +++ + + ++V +NK D Sbjct: 11683 VDCPGHIDYVKNMITGAAKMDAGILVCSATDGVMP*TREHILLCR*VGVNTIIVFVNKCD 11504 Query: 150 LLPEGKRQAAIDKMTKKMQKTLENTKFRGAPIIPVXXXXXXXXXXXXXXXXXIPELIELL 209 + + + Q ++ +++ E + +P+I + L++++ Sbjct: 11503 VAKDSEIQELVEMEVRELLAKYEYDGEK-SPVIFGSALCALNGTEKELGEDKVV*LLKIM 11327 Query: 210 TSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIP--ALKVVK-K 266 I IP R PFLMS++ + I G+GTV+TGT+ +G + +G+ V++ A K+ + Sbjct: 11326 DE*IPIP*RLTDKPFLMSIEGTY*IAGRGTVVTGTVDAGKVKVGEDVDVAGYAPKINRTT 11147 Query: 267 VKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERGL 302 + ++ F + A GD +G+ + + RG+ Sbjct: 11146 ITGIETFRK*LDYAEAGDNVGLLLRGATRDDVRRGI 11039 >gi|340506248|gb|GL983673.1| Ichthyophthirius multifiliis unplaced genomic scaffold scaff_1120509250587, whole genome shotgun sequence Length = 90329 Score = 59.3 bits (142), Expect = 1e-08 Identities = 61/281 (21%), Positives = 108/281 (38%), Gaps = 12/281 (4%) Frame = +1 Query: 37 DKQPQSRERGITLDLGFSCFSVPLPARLRSSXXXXXXXXXXXXXXXXXXXQVTLVDCPGH 96 DK RERGIT+D+ F T++D PGH Sbjct: 38479 DKLKAERERGITIDISLWKFETA-------------------------KYHFTIIDAPGH 38583 Query: 97 ASLIRTIIGGAQIIDLMMLVI-----DVTKGMQTQS---AECLVIGQIACQKLVVVLNKI 148 I+ +I G D+ +L+I + G+ L+ + + +VV +NK+ Sbjct: 38584 RDFIKNMITGTS*ADVAILMIASP*GEFEAGISKDG*TREHALLAFTLGVK*MVVCMNKM 38763 Query: 149 DLLPEGKRQAAIDKMTKKMQKTLENTKFR--GAPIIPVXXXXXXXXXXXXXXXXXI--PE 204 D + ++ K++ L+ ++ P IP+ P Sbjct: 38764 DEKTVNYSEERY*EIKKELSDYLKKVGYKPDTIPFIPISGFNGDNMLERSSNMPWYKGPI 38943 Query: 205 LIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALKVV 264 ++E L + + P R P + + + I G GTV G + +G I G + K+ Sbjct: 38944 MVEALDA-LEAPKRPLDKPLRLPL*DVYKIGGIGTVPVGRVETGIIKPGMLIRFAPGKIE 39120 Query: 265 KKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERGLVCA 305 + KS++M H + A+ GD +G + K ++RG V + Sbjct: 39121 AECKSVEMHHE*LPEAIPGDNVGFNIKGVSVKDIKRGNVAS 39243 >gi|340508484|gb|GL983184.1| Ichthyophthirius multifiliis unplaced genomic scaffold scaff_1120509249660, whole genome shotgun sequence Length = 19720 Score = 45.8 bits (107), Expect = 1e-04 Identities = 46/181 (25%), Positives = 82/181 (45%), Gaps = 10/181 (5%) Frame = +1 Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQ-TQSAECLVIGQIACQK-LVVVL 145 V+ VDCPGH L+ T++ GA ++D +L+I +AE L I K ++++ Sbjct: 6367 VSFVDCPGHDILMSTMLTGAAVMDAALLIIAGNMSCP*P*TAEHLAAVDIMKLK*ILII* 6546 Query: 146 NKIDLLPEGKRQAAIDKMTKKMQKTLENTKFRGAPIIPVXXXXXXXXXXXXXXXXXIPEL 205 NK+D++ K A K+++ + T +PIIP + + Sbjct: 6547 NKVDVI--FKDP*AA*NNYKEIKNFILGTNAENSPIIP----------CSA*LKYNVDAV 6690 Query: 206 IELLTSQISIPTRDPSGPFLMSVDHCFSI--------KGQGTVMTGTILSGSISLGDSVE 257 + S ++P R+ P + + F + K +G V+ G+IL G + +GD +E Sbjct: 6691 C*YICSYFAVPLREL*VPPKLIIIRSFDVNKPGATVNKLKGGVVGGSIL*GVLKIGDEIE 6870 Query: 258 I 258 I Sbjct: 6871 I 6873 >gi|340506843|gb|GL983551.1| Ichthyophthirius multifiliis unplaced genomic scaffold scaff_1120509250345, whole genome shotgun sequence Length = 63840 Score = 38.9 bits (89), Expect = 0.017 Identities = 20/60 (33%), Positives = 33/60 (55%) Frame = +1 Query: 90 LVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNKID 149 ++D PGH S G+ + D +LVID+ G++ + E L + ++ V+ LNKID Sbjct: 46372 VIDTPGHESFSNLRNRGSSLCDFAILVIDLMHGLEP*TIESLNLLRMRKTPFVIALNKID 46551 >gi|340502006|gb|GL984212.1| Ichthyophthirius multifiliis unplaced genomic scaffold scaff_1120509251251, whole genome shotgun sequence Length = 255633 Score = 37.7 bits (86), Expect = 0.038 Identities = 18/60 (30%), Positives = 34/60 (56%) Frame = +3 Query: 90 LVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNKID 149 ++D PGH G+++ DL +LV+D+ G++ + EC+ + + ++ LNKID Sbjct: 128121 IIDTPGHECFENLRKRGSKMCDLAILVVDLMHGLEA*TIECINLFKK*KIPYIIALNKID 128300 >gi|340503223|gb|GL984102.1| Ichthyophthirius multifiliis unplaced genomic scaffold scaff_1120509251140, whole genome shotgun sequence Length = 107760 Score = 35.8 bits (81), Expect = 0.14 Identities = 17/62 (27%), Positives = 32/62 (51%) Frame = -1 Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNK 147 + L+D PGH + ++ D ++++DV +G+ + + L K ++VLNK Sbjct: 44688 INLIDSPGHVEFSSEVSSALRLTDGSLILVDVIEGVSS*TYTVLKQSYTEKVKSILVLNK 44509 Query: 148 ID 149 ID Sbjct: 44508 ID 44503 >gi|340505879|gb|GL983770.1| Ichthyophthirius multifiliis unplaced genomic scaffold scaff_1120509250761, whole genome shotgun sequence Length = 47688 Score = 30.8 bits (68), Expect = 4.6 Identities = 16/62 (25%), Positives = 30/62 (48%) Frame = +3 Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNK 147 + L+D PGH + ++ D ++V+D +G+ + L K V+++NK Sbjct: 9852 INLIDSPGHVDFSSEVTAALRVTDGALVVVDCIEGVCV*TETVLR*AM*EKIKPVLIVNK 10031 Query: 148 ID 149 ID Sbjct: 10032ID 10037 Database: I.multifiliis_strain_G5/genome.fa Posted date: Nov 21, 2011 7:46 PM Number of letters in database: 48,799,969 Number of sequences in database: 2017 Lambda K H 0.321 0.137 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 20,927,159 Number of Sequences: 2017 Number of extensions: 234670 Number of successful extensions: 431 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 29 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 390 Number of HSP's gapped (non-prelim): 50 length of query: 596 length of database: 16,266,656 effective HSP length: 109 effective length of query: 487 effective length of database: 16,046,803 effective search space: 7814793061 effective search space used: 7814793061 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 65 (29.6 bits)