TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SPP00000038_1.0 # Protein # Eukaryotic elongation factor (eEFSec) # Homo sapiens # Complete (596 letters) Database: F.cylindrus/genome.fa 271 sequences; 80,540,407 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value scaffold_30 181 4e-45 scaffold_70 84 1e-15 scaffold_7 84 1e-15 scaffold_52 64 6e-10 scaffold_11 59 3e-08 scaffold_9 59 3e-08 scaffold_31 54 8e-07 scaffold_130 50 1e-05 scaffold_2 50 1e-05 scaffold_76 42 0.003 scaffold_23 42 0.003 scaffold_71 42 0.004 scaffold_1 42 0.004 scaffold_17 35 0.41 scaffold_3 35 0.41 scaffold_5 34 0.70 scaffold_196 33 2.0 >scaffold_30 Length = 728828 Score = 181 bits (459), Expect = 4e-45 Identities = 143/476 (30%), Positives = 213/476 (44%), Gaps = 105/476 (22%) Frame = +3 Query: 224 FLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPAL-KVVKKVKSMQMFHMPITSAMQ 282 F ++DHCF IKG GTV+TGT L+GSI++ D +E P+L + +KVKS+QMF Q Sbjct: 296769 FYFAIDHCFPIKGMGTVLTGTCLNGSINVNDIIEFPSLGNLQRKVKSIQMFKRRCLKIQQ 296948 Query: 283 GDRLGICVTQFDPKLLERGLVCAPESLHTVHAALISVEK-IPYFRGP-LQTKAKFHITVG 340 GDR GICV+ FD LERG+ P S+ V + V K IP+++GP L+ K+K+H++VG Sbjct: 296949 GDRAGICVSNFDSTSLERGVCSTPGSVKYVKGGIALVRKIIPHYKGPYLKNKSKYHVSVG 297128 Query: 341 HETVMGRLMFFSPAPDNF--------DQEPI----------------LDSFNFSQEYL-- 374 H TVM + F+ D+E D+ + YL Sbjct: 297129 HSTVMATVSFWGAKELELKLKNEVLQDKERASANGGGDGGGTASCLGSDADHAGLPYLKF 297308 Query: 375 -FQEQYLSKD-LTPAVTDNDEADKKAG----QATEGHCPRQQ------------------ 410 ++E +L +D L ++T ++E D G T G Q Sbjct: 297309 DWKEDFLLQDGLVDSLTKDNEHDASLGGVSSTKTNGSNGNDQDNNGTIKNNKQKQPESLL 297488 Query: 411 -WALVEFEKPVTCPRLCLVIGSRLDADIHTN----------------------------- 440 WA+++F+ PV CP L+IGSRLDA + N Sbjct: 297489 HWAILDFQTPVYCPLQSLIIGSRLDAPVEGNNHKQQSKSNKKNNSNNNNNSGDDDNMDED 297668 Query: 441 ----------TCRLAFHGILLHGLEDRNYADSFLPRLKVYKLKHKHGLVERAMDD----- 485 +CRLAF G L+ L D + +++ Y K K G+V R D Sbjct: 297669 SPGHKNNKASSCRLAFCGRLIERLTD---PSKDIHKIRWYTPKEKRGIVSRLGDPHKRQD 297839 Query: 486 ------YSVIGRSLFKKETNIQLFVGLK-VHLSTGELGIIDSAFGQSGKFKIHIPGGLSP 538 Y + G LFKKET ++ F+G+K + + ++G + SAFG SGKF++ P G + Sbjct: 297840 DSKTVRYELYGSDLFKKETLLKPFLGMKLITYPSNDIGELKSAFGTSGKFRVVFPSGTTA 298019 Query: 539 ESKKILTPALKKRARAGRGEATRQEESAERSEPSQHVVLSLTFKRYVFDTHKRMVQ 594 + ++ +L L FKR+++DT K+M Q Sbjct: 298020 K---------------------------------ENDILRLPFKRFLYDTEKKMRQ 298088 Score = 121 bits (304), Expect = 3e-27 Identities = 64/155 (41%), Positives = 93/155 (60%), Gaps = 16/155 (10%) Frame = +3 Query: 46 GITLDLGFSCFSVPLPARLR---------------SSXXXXXXXXXXXXXXXXXXXQVTL 90 G+TLDLGFSCF + LP RL+ ++ Q+TL Sbjct: 295938 GMTLDLGFSCFFMDLPERLKLQLQASSNNKSSKDNNNTNNNNNVVSKSKSNKLKYLQMTL 296117 Query: 91 VDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNKIDL 150 VDCPGHASLIRTIIGGAQIID+++LV+D KG Q Q+ ECLV+ ++ L++ LNKID+ Sbjct: 296118 VDCPGHASLIRTIIGGAQIIDIVLLVVDAYKGWQAQTTECLVLAELTSSTLIIALNKIDM 296297 Query: 151 LPEGKRQAAIDKMTKKMQKTL-ENTKFRGAPIIPV 184 P +R+ + + T+K+++ L ++TKF +P+ Sbjct: 296298 FPIAEREQRLQEATQKVRERLKQSTKFNDPSQVPI 296402 >scaffold_70 Length = 275172 Score = 83.6 bits (205), Expect = 1e-15 Identities = 61/222 (27%), Positives = 109/222 (49%), Gaps = 6/222 (2%) Frame = +1 Query: 94 PGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIG-QIACQKLVVVLNKIDLLP 152 PGHA ++ +I GA +D +LV+ T G Q+ E +++ Q+ LVV +NK DL+ Sbjct: 141148 PGHADYVKNMITGAAQMDGGILVVAATDGPMPQTREHILLAKQVGIPNLVVFMNKCDLVD 141327 Query: 153 EGKRQAAIDKMTKKMQKTLENTKFRG--APIIPVXXXXXXXXXXXXXXXXXIPELIELLT 210 + + ++ + ++++ L + G II I +L++ + Sbjct: 141328 D---EELLELVEMEIRELLCQYDYDGDEITIIRGSALCAAEGTNHEMGRDAILQLMDAVD 141498 Query: 211 SQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALKVVKKV--K 268 I P RD FLMSV+ FSI G+GTV+TG + G +++GD +E+ + +K Sbjct: 141499 EHIPEPERDLDKDFLMSVEDTFSIAGRGTVVTGRVEQGIVNVGDDLEVVGFEQDQKTTCT 141678 Query: 269 SMQMFHMPITSAMQGDRLGICVTQFDPKLLERG-LVCAPESL 309 ++MF + GD +G + + + RG ++C P S+ Sbjct: 141679 GVEMFRKLLDRGQAGDNIGALLRGLKREDVRRGQVLCKPGSV 141804 >scaffold_7 Length = 2770240 Score = 83.6 bits (205), Expect = 1e-15 Identities = 61/222 (27%), Positives = 109/222 (49%), Gaps = 6/222 (2%) Frame = -1 Query: 94 PGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIG-QIACQKLVVVLNKIDLLP 152 PGHA ++ +I GA +D +LV+ T G Q+ E +++ Q+ LVV +NK DL+ Sbjct: 2201182 PGHADYVKNMITGAAQMDGGILVVAATDGPMPQTREHILLAKQVGIPNLVVFMNKCDLVD 2201003 Query: 153 EGKRQAAIDKMTKKMQKTLENTKFRG--APIIPVXXXXXXXXXXXXXXXXXIPELIELLT 210 + + ++ + ++++ L + G II I +L++ + Sbjct: 2201002 D---EELLELVEMEIRELLCQYDYDGDEITIIRGSALCAAEGTNHEMGRDAILQLMDAVD 2200832 Query: 211 SQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALKVVKKV--K 268 I P RD FLMSV+ FSI G+GTV+TG + G +++GD +E+ + +K Sbjct: 2200831 EHIPEPERDLDKDFLMSVEDTFSIAGRGTVVTGRVEQGIVNVGDDLEVVGFEQDQKTTCT 2200652 Query: 269 SMQMFHMPITSAMQGDRLGICVTQFDPKLLERG-LVCAPESL 309 ++MF + GD +G + + + RG ++C P S+ Sbjct: 2200651 GVEMFRKLLDRGQAGDNIGALLRGLKREDVRRGQVLCKPGSV 2200526 Score = 64.3 bits (155), Expect = 6e-10 Identities = 63/237 (26%), Positives = 109/237 (45%), Gaps = 27/237 (11%) Frame = +2 Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGM-QTQSAECLVIGQIACQKLVVVL- 145 V+ VDCPGH L+ T++ GA ++D L++ + Q Q++E L +I K +++L Sbjct: 2007422 VSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNETCPQPQTSEHLAAVEIMRLKEILILQ 2007601 Query: 146 NKIDLLPEGKRQAAIDKMTKKMQKTLENTKFRGAPIIPVXXXXXXXXXXXXXXXXXIPEL 205 NK+DL+ K AA+ + ++++K + T APIIP+ I + Sbjct: 2007602 NKVDLV---KPDAALAQQ-EQIRKFVAGTVADSAPIIPI----------SAVLKYNIDVV 2007739 Query: 206 IELLTSQISIPTRDPSGPFLMSVDHCFSIKG--------QGTVMTGTILSGSISLGDSVE 257 E + +I +P RD + + V F + QG V G+IL G + +GD VE Sbjct: 2007740 CEYIVRKIPLPIRDFTSVPQLIVIRSFDVNRPGQDVSDLQGGVAGGSILKGVLKVGDEVE 2007919 Query: 258 I-PAL----------------KVVKKVKSMQMFHMPITSAMQGDRLGICVTQFDPKL 297 + P + + K+ S+ + + A+ G +G+ T+ DP L Sbjct: 2007920 VRPGIVTKQEGEDGNTTMVCSPIYSKISSLATENNELQYAVPGGLIGV-GTRIDPTL 2008087 >scaffold_52 Length = 408677 Score = 64.3 bits (155), Expect = 6e-10 Identities = 63/237 (26%), Positives = 109/237 (45%), Gaps = 27/237 (11%) Frame = +1 Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGM-QTQSAECLVIGQIACQKLVVVL- 145 V+ VDCPGH L+ T++ GA ++D L++ + Q Q++E L +I K +++L Sbjct: 406240 VSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNETCPQPQTSEHLAAVEIMRLKEILILQ 406419 Query: 146 NKIDLLPEGKRQAAIDKMTKKMQKTLENTKFRGAPIIPVXXXXXXXXXXXXXXXXXIPEL 205 NK+DL+ K AA+ + ++++K + T APIIP+ I + Sbjct: 406420 NKVDLV---KPDAALAQQ-EQIRKFVAGTVADSAPIIPI----------SAVLKYNIDVV 406557 Query: 206 IELLTSQISIPTRDPSGPFLMSVDHCFSIKG--------QGTVMTGTILSGSISLGDSVE 257 E + +I +P RD + + V F + QG V G+IL G + +GD VE Sbjct: 406558 CEYIVRKIPLPIRDFTSVPQLIVIRSFDVNRPGQDVSDLQGGVAGGSILKGVLKVGDEVE 406737 Query: 258 I-PAL----------------KVVKKVKSMQMFHMPITSAMQGDRLGICVTQFDPKL 297 + P + + K+ S+ + + A+ G +G+ T+ DP L Sbjct: 406738 VRPGIVTKQEGEDGNTTMVCSPIYSKISSLATENNELQYAVPGGLIGV-GTRIDPTL 406905 >scaffold_11 Length = 1700871 Score = 58.5 bits (140), Expect = 3e-08 Identities = 55/238 (23%), Positives = 100/238 (42%), Gaps = 36/238 (15%) Frame = +1 Query: 89 TLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKG------------------MQTQSAEC 130 T+VD PGH I+ +I G+ D+ ML++ KG Q A Sbjct: 264805 TIVDAPGHKDYIKNMITGSATADVGMLLVPAEKGGFEAAIAKADAKLGVDEGQTRQHARL 264984 Query: 131 LVIGQIACQKLVVVLNKIDLL--PEGKRQAAIDKMTKKMQKT---------LENTKFRGA 179 L + + ++++V +NK+D E + D+ K +Q + + F G Sbjct: 264985 LYL--LGVEQILVGINKMDACNWSEERFLEIKDEFVKMLQMIGFKPKKVPFIPYSGFHGD 265158 Query: 180 ----PIIPVXXXXXXXXXXXXXXXXXIP--ELIELLTSQISIPTRDPSGPFLMSVDHCFS 233 P+ P I ++E L + I+ P R+P + V + ++ Sbjct: 265159 NLVDPVDPAKAPWYKGWSANQTPKKQITGFTIVEALNNYITPPKREPDAALRLPVSNIYN 265338 Query: 234 IKGQGTVMTGTILSGSISLGDSVE-IPALKVVKKVKSMQMFHMPITSAMQGDRLGICV 290 IKG G ++ GT+ G++ GD V +P+ KK+ S++ + SA G+ +G+ + Sbjct: 265339 IKGVGQIICGTVEQGTLRPGDQVGFVPSNLKGKKIFSIEQHKKVLDSAGPGNSVGLSI 265512 >scaffold_9 Length = 2734635 Score = 58.5 bits (140), Expect = 3e-08 Identities = 55/238 (23%), Positives = 100/238 (42%), Gaps = 36/238 (15%) Frame = +2 Query: 89 TLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKG------------------MQTQSAEC 130 T+VD PGH I+ +I G+ D+ ML++ KG Q A Sbjct: 1821803 TIVDAPGHKDYIKNMITGSATADVGMLLVPAEKGGFEAAIAKADAKLGVDEGQTRQHARL 1821982 Query: 131 LVIGQIACQKLVVVLNKIDLL--PEGKRQAAIDKMTKKMQKT---------LENTKFRGA 179 L + + ++++V +NK+D E + D+ K +Q + + F G Sbjct: 1821983 LYL--LGVEQILVGINKMDACNWSEERFLEIKDEFVKMLQMIGFKPKKVPFIPYSGFHGD 1822156 Query: 180 ----PIIPVXXXXXXXXXXXXXXXXXIP--ELIELLTSQISIPTRDPSGPFLMSVDHCFS 233 P+ P I ++E L + I+ P R+P + V + ++ Sbjct: 1822157 NLVDPVDPAKAPWYKGWSANQTPKKQITGFTIVEALNNYITPPKREPDAALRLPVSNIYN 1822336 Query: 234 IKGQGTVMTGTILSGSISLGDSVE-IPALKVVKKVKSMQMFHMPITSAMQGDRLGICV 290 IKG G ++ GT+ G++ GD V +P+ KK+ S++ + SA G+ +G+ + Sbjct: 1822337 IKGVGQIICGTVEQGTLRPGDQVGFVPSNLKGKKIFSIEQHKKVLDSAGPGNSVGLSI 1822510 >scaffold_31 Length = 773263 Score = 53.9 bits (128), Expect = 8e-07 Identities = 50/236 (21%), Positives = 96/236 (40%), Gaps = 19/236 (8%) Frame = -3 Query: 87 QVTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTK-GMQTQSA-----------ECLVIG 134 Q T++D PGH + I +I G D+ +L+ID ++ G A + L+ Sbjct: 82445 QFTIIDTPGHRNYIENMITGISQADVAILIIDSSQYGRYDDEAGGGGICSSGNEDALLAY 82266 Query: 135 QIACQKLVVVLNKIDLLPEGKRQAAIDKMTKKMQKTLENTKFR--GAPIIPVXXXXXXXX 192 ++++VV+NK+D + + + L+ ++ P IP+ Sbjct: 82265 TFGVKQMIVVINKMDDDTVDFSEERYKSIRYDVSSLLKQVGYKPMKIPFIPISGLLGDNL 82086 Query: 193 XXXXXXXXXI--PELIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSI 250 P L+E L ++ P R P + + + I T+ TG + +G + Sbjct: 82085 ISKSIHMLWYNGPSLLEAL-DNVNPPKRRSDKPLRIPIQDVYKINDIQTIATGRVETGVL 81909 Query: 251 SLGDSVEIPALKVVKKVKSMQMFHMPITSAMQGDRLGICVTQF---DPKLLERGLV 303 G VE ++ ++++++ + ++ A GD +G V LL RG V Sbjct: 81908 KPGMKVEFSPSGIINTIETIEINNKTVSQATPGDIVGFTVNNAMNDTDLLLRRGYV 81741 >scaffold_130 Length = 20502 Score = 50.1 bits (118), Expect = 1e-05 Identities = 25/63 (39%), Positives = 39/63 (61%) Frame = +3 Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNK 147 +T +D PGHA+ GA I D+++LV+ G++ Q+A+ +V + A LVV +NK Sbjct: 852 ITFIDTPGHAAFTDMRERGANITDIVILVVAADDGVKQQTADSIVCARQAGVPLVVAINK 1031 Query: 148 IDL 150 IDL Sbjct: 1032IDL 1040 >scaffold_2 Length = 3822992 Score = 50.1 bits (118), Expect = 1e-05 Identities = 25/63 (39%), Positives = 39/63 (61%) Frame = +1 Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNK 147 +T +D PGHA+ GA I D+++LV+ G++ Q+A+ +V + A LVV +NK Sbjct: 748924 ITFIDTPGHAAFTDMRERGANITDIVILVVAADDGVKQQTADSIVCARQAGVPLVVAINK 749103 Query: 148 IDL 150 IDL Sbjct: 749104 IDL 749112 >scaffold_76 Length = 244932 Score = 42.4 bits (98), Expect = 0.003 Identities = 53/242 (21%), Positives = 95/242 (39%), Gaps = 27/242 (11%) Frame = -1 Query: 89 TLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGM---------QTQSAECLVIGQIACQ 139 T++D PGH + + +I GA D+ +LVI KG QT+ ++ + Sbjct: 6084 TILDAPGHKNYVPNMIMGASQADVGVLVISARKGEFETGFDRGGQTRE-HAMLAKTLGVS 5908 Query: 140 KLVVVLNKIDLLPEGKRQAAIDKMTKKMQKTLENTKF---RGAPIIPV------------ 184 LVVV+NK+D + D+ KK++ L+ + IPV Sbjct: 5907 YLVVVVNKMDDPTVNWSKERFDECVKKLRPFLKGCGYTIKTEVKFIPVSGLVGSNVKDEV 5728 Query: 185 ---XXXXXXXXXXXXXXXXXIPELIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVM 241 P L+ L S + I R+ + P + + ++ +GT+ Sbjct: 5727 DSSICSWWKNSWESGENNTSAPTLLSLFDS-LEISGRNATAPLRIPILDRYT--DRGTIA 5557 Query: 242 TGTILSGSISLGDSVEIPALKVVKKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERG 301 G + SG I G V + + KV ++ P+ +A G+ + I + + + +G Sbjct: 5556 MGKVESGVIRPGMKVTLMPTRAEYKVDAVWANEDPVAAARPGENVLIKLAGAGTEDVRKG 5377 Query: 302 LV 303 V Sbjct: 5376 FV 5371 >scaffold_23 Length = 885465 Score = 42.4 bits (98), Expect = 0.003 Identities = 53/242 (21%), Positives = 95/242 (39%), Gaps = 27/242 (11%) Frame = +1 Query: 89 TLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGM---------QTQSAECLVIGQIACQ 139 T++D PGH + + +I GA D+ +LVI KG QT+ ++ + Sbjct: 350500 TILDAPGHKNYVPNMIMGASQADVGVLVISARKGEFETGFDRGGQTRE-HAMLAKTLGVS 350676 Query: 140 KLVVVLNKIDLLPEGKRQAAIDKMTKKMQKTLENTKF---RGAPIIPV------------ 184 LVVV+NK+D + D+ KK++ L+ + IPV Sbjct: 350677 YLVVVVNKMDDPTVNWSKERFDECVKKLRPFLKGCGYTIKTEVKFIPVSGLVGSNVKDEV 350856 Query: 185 ---XXXXXXXXXXXXXXXXXIPELIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVM 241 P L+ L S + I R+ + P + + ++ +GT+ Sbjct: 350857 DSSICSWWKNSWESGENNTSAPTLLSLFDS-LEISGRNATAPLRIPILDRYT--DRGTIA 351027 Query: 242 TGTILSGSISLGDSVEIPALKVVKKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERG 301 G + SG I G V + + KV ++ P+ +A G+ + I + + + +G Sbjct: 351028 MGKVESGVIRPGMKVTLMPTRAEYKVDAVWANEDPVAAARPGENVLIKLAGAGTEDVRKG 351207 Query: 302 LV 303 V Sbjct: 351208 FV 351213 >scaffold_71 Length = 263701 Score = 41.6 bits (96), Expect = 0.004 Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 6/95 (6%) Frame = -2 Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNK 147 + LVD PGHA + ++D + LV+D +G Q+ L A +VVVLNK Sbjct: 243927 INLVDTPGHADFCGEVDRILSLVDGVCLVVDAGEGPMAQTKYVLSRALQARLPIVVVLNK 243748 Query: 148 I------DLLPEGKRQAAIDKMTKKMQKTLENTKF 176 + D + EG + +++++ +++ + E +F Sbjct: 243747 VDRRISYDRVIEGDTEISLEELMEQLGASEEQIRF 243643 >scaffold_1 Length = 5926375 Score = 41.6 bits (96), Expect = 0.004 Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 6/95 (6%) Frame = -2 Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNK 147 + LVD PGHA + ++D + LV+D +G Q+ L A +VVVLNK Sbjct: 4009713 INLVDTPGHADFCGEVDRILSLVDGVCLVVDAGEGPMAQTKYVLSRALQARLPIVVVLNK 4009534 Query: 148 I------DLLPEGKRQAAIDKMTKKMQKTLENTKF 176 + D + EG + +++++ +++ + E +F Sbjct: 4009533 VDRRISYDRVIEGDTEISLEELMEQLGASEEQIRF 4009429 Score = 41.6 bits (96), Expect = 0.004 Identities = 22/60 (36%), Positives = 34/60 (56%) Frame = +1 Query: 90 LVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNKID 149 ++D PGH S G+ + D+ +LVID+ G++ Q+ E L + + VV LNKID Sbjct: 3034237 VIDTPGHESFANLRSRGSSLCDVAILVIDMMHGLEPQTIESLNMLREKKVPFVVALNKID 3034416 >scaffold_17 Length = 1246618 Score = 35.0 bits (79), Expect = 0.41 Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 1/65 (1%) Frame = +1 Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIA-CQKLVVVLN 146 VT++DCPGH + + +D ++L +DV +G+ + E L+ IA L +V+ Sbjct: 734893 VTIMDCPGHVQFHDESVAACKAMDGVILCVDVIEGIMIHT-EMLIKQTIADGLPLCLVIT 735069 Query: 147 KIDLL 151 K+D L Sbjct: 735070 KLDRL 735084 >scaffold_3 Length = 3437899 Score = 35.0 bits (79), Expect = 0.41 Identities = 29/169 (17%), Positives = 67/169 (39%) Frame = -2 Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNK 147 + L+D PGH + + +LV+D ++G++ Q+ + + +++ VLNK Sbjct: 1795389 LNLIDTPGHVDFSYEVSRSLAGCEGALLVVDASQGIEAQTLANVYLALENNLEIIPVLNK 1795210 Query: 148 IDLLPEGKRQAAIDKMTKKMQKTLENTKFRGAPIIPVXXXXXXXXXXXXXXXXXIPELIE 207 IDL A D++ +++++T + I +++E Sbjct: 1795209 IDL-----PAADPDRVAQEIEET-------------IGLDCTDIVHASGKSGIGIEDILE 1795084 Query: 208 LLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSV 256 + I P + P + + +G ++ ++ G + GD + Sbjct: 1795083 SIVKTIPPPPANADKPLRALIFDSYYDSYRGIIVFFRVVDGQVKKGDKI 1794937 Score = 32.0 bits (71), Expect = 3.5 Identities = 27/121 (22%), Positives = 53/121 (43%), Gaps = 16/121 (13%) Frame = -1 Query: 223 PFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALKVVKKVKSMQMFHMP------ 276 P V FS +G+G V G ++ G + +GD + + + + +V ++ P Sbjct: 707122 PLRFIVTDVFS-EGKGIVTRGRVIQGFVEVGDQLVVLPVGDIVRVSKLEHLQAPSDDIDD 706946 Query: 277 ---ITSAMQGDRLGICVTQFDPKLLERG-LVCAPES----LHTVHAALISVEK--IPYFR 326 + +A+ GD + + + D L G ++C P + A +I ++K +P R Sbjct: 706945 PRRLDTAIAGDTVQLVINDIDIMRLSIGNILCFPNARPPLTKKATARIIVMDKLAVPIIR 706766 Query: 327 G 327 G Sbjct: 706765 G 706763 >scaffold_5 Length = 3184085 Score = 34.3 bits (77), Expect = 0.70 Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 2/66 (3%) Frame = -3 Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLV--VVL 145 V L+D PGH + Q D +LV+D +GM ++ + V+ + +LV +++ Sbjct: 484488 VHLLDSPGHTDFSTEVSSSLQCCDGCLLVVDAVEGMCARTHQ--VVREAHSHQLVPILII 484315 Query: 146 NKIDLL 151 NK+D L Sbjct: 484314 NKVDRL 484297 Score = 33.9 bits (76), Expect = 0.91 Identities = 16/62 (25%), Positives = 30/62 (48%) Frame = +2 Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNK 147 + L+D PGH + ++ D ++V+D G+ Q+ L K V+++NK Sbjct: 244550 INLIDSPGHVDFSSEVTAALRVTDGALVVVDTIDGVCVQTETVLRQALAERVKPVLMVNK 244729 Query: 148 ID 149 +D Sbjct: 244730 VD 244735 >scaffold_196 Length = 5117 Score = 32.7 bits (73), Expect = 2.0 Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 1/65 (1%) Frame = +3 Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIA-CQKLVVVLN 146 VT++DCPGH + + +D ++L +D +G+ + E L+ IA L +V+ Sbjct: 3216 VTIMDCPGHVQFHDESVAALRAMDGVILCVDCIEGIMIHT-EMLIKQTIADGLPLCLVIT 3392 Query: 147 KIDLL 151 K+D L Sbjct: 3393 KLDRL 3407 Database: F.cylindrus/genome.fa Posted date: Nov 21, 2011 7:46 PM Number of letters in database: 80,540,407 Number of sequences in database: 271 Lambda K H 0.321 0.137 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,409,360 Number of Sequences: 271 Number of extensions: 579283 Number of successful extensions: 2194 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 26 Number of HSP's successfully gapped in prelim test: 9 Number of HSP's that attempted gapping in prelim test: 1883 Number of HSP's gapped (non-prelim): 750 length of query: 596 length of database: 26,846,802 effective HSP length: 112 effective length of query: 484 effective length of database: 26,816,450 effective search space: 12979161800 effective search space used: 12979161800 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 67 (30.4 bits)