TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SPP00000038_1.0 # Protein # Eukaryotic elongation factor (eEFSec) # Homo sapiens # Complete (596 letters) Database: D.discoideum_AX4/genome.fa 6 sequences; 33,943,072 total letters Searching......done Score E Sequences producing significant alignments: (bits) Value gi|93569114|gb|CM000150.2| Dictyostelium discoideum AX4 chromoso... 389 e-121 gi|93569069|gb|CM000154.2| Dictyostelium discoideum AX4 chromoso... 92 2e-18 gi|93569092|gb|CM000152.2| Dictyostelium discoideum AX4 chromoso... 61 3e-09 gi|93569080|gb|CM000153.2| Dictyostelium discoideum AX4 chromoso... 60 5e-09 gi|93569058|gb|CM000155.2| Dictyostelium discoideum AX4 chromoso... 47 4e-05 >gi|93569114|gb|CM000150.2| Dictyostelium discoideum AX4 chromosome 1, whole genome shotgun sequence Length = 4923596 Score = 389 bits (999), Expect(2) = e-121 Identities = 204/474 (43%), Positives = 291/474 (61%), Gaps = 5/474 (1%) Frame = +3 Query: 13 LGHIDSGKXXXXXXXXXXXXXXXFDKQPQSRERGITLDLGFSCFSVPLPARLRSSXXXXX 72 +GH+DSGK DK P S+ERGITLDLGFS F + ++ Sbjct: 4735722 MGHVDSGKTSLAKALSTNLSTASLDKSPASQERGITLDLGFSSFQIKKDKLAENNNNNND 4735901 Query: 73 XXXXXXXXXXXXXXQVTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLV 132 Q+TLVDCPGHASLI+TIIGG+QIID+M LVID+ KG+QTQ+AEC+V Sbjct: 4735902 NNNNI---------QITLVDCPGHASLIKTIIGGSQIIDMMFLVIDIVKGIQTQTAECIV 4736054 Query: 133 IGQIACQKLVVVLNKIDLLPEGKRQAAIDKMTKKMQKTLENTKFRGAPIIPVXXXXXXXX 192 IG+I C+K +++LNKID +P R+ I++++ K++K LE T F+ + IIP Sbjct: 4736055 IGEITCKKGIIILNKIDQIPVESRKEKIEQVSSKLRKALEKTCFKDSLIIPFSATGGSSS 4736234 Query: 193 XXXXXXXXXIPELIELLTSQ----ISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSG 248 P I+LLT + I+IP R+ G L DHCF IKGQGT++TGT+L G Sbjct: 4736235 GGGSNSNKIEPIGIDLLTKELLNFINIPKREAKGDLLFEFDHCFQIKGQGTILTGTVLRG 4736414 Query: 249 SISLGDSVEIPALKVVKKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERGLVCAPES 308 SI + ++IP L + KKVKSMQMFH PI A+QGDR+G+C+TQ D LLERGLVC+ S Sbjct: 4736415 SIEVNQIIQIPQLNIEKKVKSMQMFHKPIKKAIQGDRVGVCITQLDSSLLERGLVCSNNS 4736594 Query: 309 LHTVHAALISVEKIPYFRGPLQTKAKFHITVGHETVMGRLMFFSPAPDNFDQEPILDSFN 368 + + +ALIS+EK+ +++ + +K +FHIT+GH TV+G + FS I++ FN Sbjct: 4736595 IPLLSSALISIEKVRFYKQQVNSKQQFHITIGHSTVIGTITLFS--------SNIIEPFN 4736750 Query: 369 FSQEYLFQEQYLSKDLTPAVTDNDEADKKAGQATEGHCP-RQQWALVEFEKPVTCPRLCL 427 +EY++++ + + + DN+ + + E P Q+AL++F+ P+ CP + Sbjct: 4736751 SIKEYIYEDTLHATTINTSSNDNNTINSNNVENKESFYPVGSQFALIKFDHPILCPLNSV 4736930 Query: 428 VIGSRLDADIHTNTCRLAFHGILLHGLEDRNYADSFLPRLKVYKLKHKHGLVER 481 VIGS+LD ++ + CR+AFHG LL G++D N S +LK+YK K K G VER Sbjct: 4736931 VIGSKLDVNLDSTGCRIAFHGNLLEGIDDTN-KQSLFSKLKIYKNKSKQGQVER 4737089 Score = 73.9 bits (180), Expect = 3e-13 Identities = 66/280 (23%), Positives = 110/280 (39%), Gaps = 13/280 (4%) Frame = -2 Query: 37 DKQPQSRERGITLDLGFSCFSVPLPARLRSSXXXXXXXXXXXXXXXXXXXQVTLVDCPGH 96 DK RERGIT+D+ F T++D PGH Sbjct: 2796925 DKLKAERERGITIDIALWKFETS-------------------------KYYFTIIDAPGH 2796821 Query: 97 ASLIRTIIGGAQIIDLMMLVI---------DVTKGMQTQSAECLVIGQIACQKLVVVLNK 147 I+ +I G D +LVI + K QT+ L+ + ++++V +NK Sbjct: 2796820 RDFIKNMITGTSQADCAVLVIASPTGEFEAGIAKNGQTRE-HALLAYTLGVKQMIVAINK 2796644 Query: 148 IDLLPEGKRQAAIDKMTKKMQKTLENTKFRGAPI--IPVXXXXXXXXXXXXXXXXXI--P 203 +D QA D++ K++ ++ + + +P+ P Sbjct: 2796643 MDEKSTNYSQARYDEIVKEVSSFIKKIGYNPEKVAFVPISGWNGDNMLERSDKMEWYKGP 2796464 Query: 204 ELIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALKV 263 L+E L + + P R P + + + I G GTV G + +G I G V + Sbjct: 2796463 TLLEALDAIVE-PKRPHDKPLRIPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPAGL 2796287 Query: 264 VKKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERGLV 303 +VKS++M H + A GD +G V K ++RG+V Sbjct: 2796286 STEVKSVEMHHEQLPEARPGDNVGFNVKNVSVKEIKRGMV 2796167 Score = 73.9 bits (180), Expect = 3e-13 Identities = 66/280 (23%), Positives = 110/280 (39%), Gaps = 13/280 (4%) Frame = -3 Query: 37 DKQPQSRERGITLDLGFSCFSVPLPARLRSSXXXXXXXXXXXXXXXXXXXQVTLVDCPGH 96 DK RERGIT+D+ F T++D PGH Sbjct: 2432946 DKLKAERERGITIDIALWKFETS-------------------------KYYFTIIDAPGH 2432842 Query: 97 ASLIRTIIGGAQIIDLMMLVI---------DVTKGMQTQSAECLVIGQIACQKLVVVLNK 147 I+ +I G D +LVI + K QT+ L+ + ++++V +NK Sbjct: 2432841 RDFIKNMITGTSQADCAVLVIASPTGEFEAGIAKNGQTRE-HALLAYTLGVKQMIVAINK 2432665 Query: 148 IDLLPEGKRQAAIDKMTKKMQKTLENTKFRGAPI--IPVXXXXXXXXXXXXXXXXXI--P 203 +D QA D++ K++ ++ + + +P+ P Sbjct: 2432664 MDEKSTNYSQARYDEIVKEVSSFIKKIGYNPEKVAFVPISGWNGDNMLERSDKMEWYKGP 2432485 Query: 204 ELIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALKV 263 L+E L + + P R P + + + I G GTV G + +G I G V + Sbjct: 2432484 TLLEALDAIVE-PKRPHDKPLRIPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPAGL 2432308 Query: 264 VKKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERGLV 303 +VKS++M H + A GD +G V K ++RG+V Sbjct: 2432307 STEVKSVEMHHEQLPEARPGDNVGFNVKNVSVKEIKRGMV 2432188 Score = 65.9 bits (159), Expect(2) = e-121 Identities = 38/111 (34%), Positives = 63/111 (56%) Frame = +2 Query: 484 DDYSVIGRSLFKKETNIQLFVGLKVHLSTGELGIIDSAFGQSGKFKIHIPGGLSPESKKI 543 ++ ++IG++LFKK+++I F+G+KV TGE+GI+DS+FG++GK KI I G + ES K+ Sbjct: 4737191 NENTIIGKNLFKKDSDISSFIGMKVLFETGEIGILDSSFGKTGKVKIQIQTG-NTESIKL 4737367 Query: 544 LTPALKKRARAGRGEATRQEESAERSEPSQHVVLSLTFKRYVFDTHKRMVQ 594 T + +LTFKR+++D +K+ Q Sbjct: 4737368 GT------------------------------IFTLTFKRFMYDQNKKNKQ 4737430 Score = 32.0 bits (71), Expect = 1.5 Identities = 21/85 (24%), Positives = 37/85 (43%) Frame = -2 Query: 87 QVTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLN 146 ++ +VD PGH + ++ID + + D G+Q QS + + +N Sbjct: 808789 RINIVDTPGHVDFTVEVERSVRVIDGGVAIFDGVAGVQAQSITVWNQAERYKVPRIAFIN 808610 Query: 147 KIDLLPEGKRQAAIDKMTKKMQKTL 171 K+D + ++IDK K M L Sbjct: 808609 KMD-----REGSSIDKTLKMMTDRL 808550 >gi|93569069|gb|CM000154.2| Dictyostelium discoideum AX4 chromosome 5, whole genome shotgun sequence Length = 5125352 Score = 91.7 bits (226), Expect = 2e-18 Identities = 66/221 (29%), Positives = 107/221 (48%), Gaps = 8/221 (3%) Frame = -1 Query: 91 VDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIG-QIACQKLVVVLNKID 149 +DCPGH I+ +I GA +D +LV+ G Q Q+ E +++ ++ LVV LNK+D Sbjct: 2978480 IDCPGHQHYIKNMITGAAQMDGAILVVSAPDGPQEQTREHIILSREVGIPALVVFLNKMD 2978301 Query: 150 LLPEGKRQAAIDKMTKKMQKTLENTKFRG--APIIP---VXXXXXXXXXXXXXXXXXIPE 204 ++ + ++++ L F G P + I E Sbjct: 2978300 ----NADPDLVEIVEMEVRELLSQYGFNGDETPFVKGAAAVALAETNETATQYGRKAIDE 2978133 Query: 205 LIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALKVV 264 L+E+L ++I +P R PFLM V+ FSI G+GTV TG I G++ +G+ V I +K V Sbjct: 2978132 LVEVLDTKIPLPHRAVDKPFLMPVEEVFSISGRGTVATGRIEQGTLKVGEEVAIVGIKPV 2977953 Query: 265 KK--VKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERGLV 303 K V ++MF + A G+ +G + + + RG V Sbjct: 2977952 PKVAVTGIEMFGKLLDFAQAGENVGCLLRGLKREEVLRGEV 2977830 Score = 34.7 bits (78), Expect = 0.23 Identities = 17/62 (27%), Positives = 30/62 (48%) Frame = -1 Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNK 147 + L+D PGH + ++ D ++VID +G+ Q+ L K V+ +NK Sbjct: 692177 INLIDSPGHVDFSSEVTAALRVTDGALVVIDCVEGVCVQTETVLRQAMAERIKPVLFVNK 691998 Query: 148 ID 149 +D Sbjct: 691997 VD 691992 Score = 33.9 bits (76), Expect = 0.39 Identities = 17/62 (27%), Positives = 30/62 (48%) Frame = +1 Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNK 147 + L+D PGH + ++ D ++VID +G+ Q+ L K V+ +NK Sbjct: 1470910 INLIDSPGHVDFSSEVTAALRVTDGALVVIDCVEGVCVQTETVLRQAVAERIKPVLFVNK 1471089 Query: 148 ID 149 +D Sbjct: 1471090 VD 1471095 Score = 32.3 bits (72), Expect = 1.1 Identities = 35/135 (25%), Positives = 57/135 (42%), Gaps = 15/135 (11%) Frame = -1 Query: 213 ISIPTRDPSGPFLMSVDHCFSIKGQGTVMT-GTILSGSISLGDSVEI------PALKVVK 265 ++I DP+GP +M V +G G + SG+I G V I P K Sbjct: 691331 LAIANCDPNGPLMMYVSKMIPTSDKGRFYAFGRVFSGTIRTGQKVRIMGPDYVPGKKDDL 691152 Query: 266 KVKSMQMFHMPITSAMQ-------GDRLGIC-VTQFDPKLLERGLVCAPESLHTVHAALI 317 +KS+Q + + ++ G+ +G+ V QF L++ G + E+ H + Sbjct: 691151 YLKSIQRTVLMMGRKIELLDDCPCGNIIGLVGVDQF---LVKSGTISTEETAHNIRVMKF 690981 Query: 318 SVEKIPYFRGPLQTK 332 SV P R +Q K Sbjct: 690980 SVS--PVVRVAVQPK 690942 >gi|93569092|gb|CM000152.2| Dictyostelium discoideum AX4 chromosome 3, whole genome shotgun sequence Length = 6357299 Score = 60.8 bits (146), Expect = 3e-09 Identities = 68/251 (27%), Positives = 109/251 (43%), Gaps = 22/251 (8%) Frame = -2 Query: 95 GHASLIRTIIGGAQIIDLMMLVIDVTKGM-QTQSAECLVIGQIACQKLVVVL-NKIDLLP 152 GH L+ T++ GA ++D +L+I + Q Q++E + +I K +++L NKIDL+ Sbjct: 1530337 GHDVLMATMLNGAAVMDAALLLIAGNESCPQPQTSEHIAAIEIMNLKNIIILQNKIDLVK 1530158 Query: 153 EGKRQAAIDKMTKKMQKTLENTKFRGAPIIPVXXXXXXXXXXXXXXXXXIPELIELLTSQ 212 E Q ++ K +Q T+ APIIP+ I + E + + Sbjct: 1530157 EAAAQEQYGQILKFIQGTIAEN----APIIPI----------SAQMKYNIDVICEYIVKK 1530020 Query: 213 ISIPTRDPSGPFLMSVDHCFSIKGQGT--------VMTGTILSGSISLGDSVEIPALKVV 264 I IP RD + M V F + G+ V G+IL G + +GD +E+ + Sbjct: 1530019 IPIPVRDFTSDPRMIVIRSFDVNKPGSRVDEIKGGVAGGSILKGVLKIGDEIEVRPGVIS 1529840 Query: 265 K----KVKSMQMFHMPITSAMQGDRLGICV--------TQFDPKLLERGLVCAPESLHTV 312 K K+K +F I+ + + L V T+ DP L C + L V Sbjct: 1529839 KELDGKIKCSPIFCRIISLFAEENELQYAVPGGLIGVGTKIDPTL------CRADRL--V 1529684 Query: 313 HAALISVEKIP 323 L SV K+P Sbjct: 1529683 GQVLGSVGKLP 1529651 Score = 46.2 bits (108), Expect = 8e-05 Identities = 23/66 (34%), Positives = 38/66 (57%) Frame = -2 Query: 90 LVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNKID 149 L+D PGH S G+ + DL +LVID+ G+Q Q+ E + + ++ +V LNK+D Sbjct: 1233556 LIDTPGHESFNNLRSRGSGLCDLAILVIDIMHGLQAQTLESINLLRMRKTPFIVALNKVD 1233377 Query: 150 LLPEGK 155 + + K Sbjct: 1233376 RIYDWK 1233359 Score = 37.0 bits (84), Expect = 0.046 Identities = 53/227 (23%), Positives = 87/227 (38%), Gaps = 25/227 (11%) Frame = -1 Query: 89 TLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAE-------CLVIGQIACQKL 141 T++D PGH + +I GA D+ +LVI KG E + I + L Sbjct: 856340 TILDAPGHRLYVPNMIIGAAQADVGILVISSKKGEFEAGVEGGQTIEHARLAKMIGIKYL 856161 Query: 142 VVVLNKIDLLPEGKRQAAIDKMTKKMQKTLENTKFRG------------------APIIP 183 VV +NK+D +A D++T K+ L+ + AP+ P Sbjct: 856160 VVFVNKMDEPTVKWSKARYDEITDKLTVHLKKCGWNPKKDFHFVPGSGYGTLNVLAPLAP 855981 Query: 184 VXXXXXXXXXXXXXXXXXIPELIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTG 243 P LI L +S R+ G + + + +G V+ G Sbjct: 855980 GVCDWYSG-----------PSLIGTL-DNLSGMERNEGGALRIPITTSYKDRGIVNVI-G 855840 Query: 244 TILSGSISLGDSVEIPALKVVKKVKSMQMFHMPITSAMQGDRLGICV 290 + SG+IS+G S+ I K +V S+ +A G+ + I + Sbjct: 855839 KVESGTISVGQSIHIMPGKTKVEVISLTGDICSFKTARPGENITIAL 855699 Score = 34.3 bits (77), Expect = 0.30 Identities = 19/64 (29%), Positives = 31/64 (48%) Frame = -1 Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNK 147 + L+D PGH + +I D ++++D +G+ Q+ L K +VLNK Sbjct: 2449331 INLIDSPGHVDFSSEVSTAVRITDGALVLVDAVEGVCIQTHAVLKQAYQEKVKPCLVLNK 2449152 Query: 148 IDLL 151 ID L Sbjct: 2449151 IDRL 2449140 >gi|93569080|gb|CM000153.2| Dictyostelium discoideum AX4 chromosome 4, whole genome shotgun sequence Length = 5450249 Score = 60.1 bits (144), Expect = 5e-09 Identities = 63/282 (22%), Positives = 117/282 (41%), Gaps = 15/282 (5%) Frame = +2 Query: 37 DKQPQSRERGITLDLGFSCFSVPLPARLRSSXXXXXXXXXXXXXXXXXXXQVTLVDCPGH 96 D+Q + RERG+T+D+ F ++TL+D PGH Sbjct: 1140518 DEQEEERERGVTMDVCVRYFETE-------------------------HRRITLLDAPGH 1140622 Query: 97 ASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAE------CLVIGQIACQKLVVVLNKIDL 150 I +I G D+ +L+I+ ++ SAE L+ + +L+V +NK+D Sbjct: 1140623 RDFIPNMISGTTQADVAILLINASEFEAGFSAEGQTKEHALLAKSLGIMELIVAVNKMDS 1140802 Query: 151 LPEGKRQAAIDKMTKKMQKTLENTKF--RGAPIIPV------XXXXXXXXXXXXXXXXXI 202 + Q+ D + + ++ L + KF + IP+ Sbjct: 1140803 IEWD--QSRYDYIVETIKTFLVHAKFNEKNIRFIPISGFTGENLIDRQESKLLKWYDSKQ 1140976 Query: 203 PELIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTV-MTGTILSGSISLGDSVEIPAL 261 P LIE + S S+ R + PF M++ + +G V + G I +G + GD + I Sbjct: 1140977 PTLIECIDS-FSVGERLLNKPFRMNISDVYKSSSKGYVAVGGKIEAGLLGNGDKILISPG 1141153 Query: 262 KVVKKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERGLV 303 + +KS++ ++ A+ GD + + + +P +L G + Sbjct: 1141154 NDICTIKSIRRNNLESEWAVGGDNVDLSLVVENPSILRVGCI 1141279 Score = 36.6 bits (83), Expect = 0.060 Identities = 15/64 (23%), Positives = 33/64 (51%) Frame = -3 Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNK 147 + ++D PGH + + + + D+ +++ID +G+ Q+ + + VV+NK Sbjct: 571509 INILDTPGHPNFLDEVTASIALSDIAVIIIDALEGVMMQTERLIKHAVAEGLSICVVINK 571330 Query: 148 IDLL 151 +D L Sbjct: 571329 MDRL 571318 Score = 31.6 bits (70), Expect = 1.9 Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%) Frame = -3 Query: 219 DPSGPFLMSVDHCFSIK-GQGTVMTGTILSGSISLGDSVEI 258 DP GP L+ + S G+G G I+SGSIS G S+ + Sbjct: 570651 DPKGPLLIYITKLLSKPDGKGFDCLGRIMSGSISKGQSIRV 570529 Score = 29.3 bits (64), Expect = 9.6 Identities = 14/44 (31%), Positives = 28/44 (63%), Gaps = 2/44 (4%) Frame = -3 Query: 111 DLMMLVIDVTK--GMQTQSAECLVIGQIACQKLVVVLNKIDLLP 152 D+++ V+D G + E +++ + +K+V++LNKIDL+P Sbjct: 5381379 DVILQVLDARDPMGCRCLEIEKMILERYTNKKIVLILNKIDLVP 5381248 >gi|93569058|gb|CM000155.2| Dictyostelium discoideum AX4 chromosome 6, whole genome shotgun sequence Length = 3602379 Score = 47.0 bits (110), Expect = 4e-05 Identities = 50/238 (21%), Positives = 96/238 (40%), Gaps = 22/238 (9%) Frame = +3 Query: 88 VTLVDCPGHASLIRTIIGG--AQIIDLMMLVIDV-TKGMQTQSAECLVIGQIACQKLVVV 144 +T VD GH ++T + G + D M+ + T G E L I + +V Sbjct: 1636836 ITFVDLAGHEKYLKTTLFGMTSSSPDYCMIAVGANTMGATGMCKEHLGIALSLHIPVYIV 1637015 Query: 145 LNKIDLLPEGKRQAAIDKMTKKMQKTLENTKFRGAPIIPVXXXXXXXXXXXXXXXXXIP- 203 + KID PE A + + +K L R P++ +P Sbjct: 1637016 ITKIDRAPENVLAATMTDI----KKILRGPGARKLPVVIKNQDDVVVAARNFVSDRVVPI 1637183 Query: 204 --------ELIELLTSQISI-PTRDP-----SGPFLMSVDHCFSIKGQGTVMTGTILSGS 249 E ++LL +++ P R P + +D +++ G GTV++GT++ G Sbjct: 1637184 FTVSNVTGENLDLLRMFLNLLPARKEWESLALKPAQLDIDSTWNVSGVGTVVSGTVMKGV 1637363 Query: 250 ISLGDSVEI----PALKVVKKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERGLV 303 I+ G+++ I + +VKS+ +P+ G + + + + + +G+V Sbjct: 1637364 ITAGETLLIGPDDSGNFIQTQVKSIHTKRLPVKHVKAGQTASLALKRIKKEQIRKGMV 1637537 Score = 36.2 bits (82), Expect = 0.078 Identities = 35/187 (18%), Positives = 75/187 (40%) Frame = +3 Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNK 147 + L+D PGH + +LV+D +G+Q Q+ + + +++ V+NK Sbjct: 641844 LNLIDTPGHVDFSYEVSRSLMACQGALLVVDAVQGVQAQTMANYYLALDSGLEVIPVINK 642023 Query: 148 IDLLPEGKRQAAIDKMTKKMQKTLENTKFRGAPIIPVXXXXXXXXXXXXXXXXXIPELIE 207 IDL A ++++ ++++ F + V +P +I+ Sbjct: 642024 IDL-----PTADVERVKQELKDAF---GFHPDDAVLV------SAKTGVGITDILPAVID 642161 Query: 208 LLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALKVVKKV 267 + PT+ P PF + + + +G + ++ G + GDS+ K +V Sbjct: 642162 RIPPP-QEPTKSPKVPFKALLFDSWFDRFRGVICLIKVVDGKVKKGDSIVSAGNKQTYEV 642338 Query: 268 KSMQMFH 274 + + H Sbjct: 642339 FDVGIMH 642359 Database: D.discoideum_AX4/genome.fa Posted date: Nov 21, 2011 7:46 PM Number of letters in database: 33,943,072 Number of sequences in database: 6 Lambda K H 0.321 0.137 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 15,793,316 Number of Sequences: 6 Number of extensions: 197734 Number of successful extensions: 558 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 374 Number of HSP's gapped (non-prelim): 328 length of query: 596 length of database: 11,314,357 effective HSP length: 106 effective length of query: 490 effective length of database: 11,313,721 effective search space: 5543723290 effective search space used: 5543723290 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 64 (29.3 bits)