TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SPP00000092_1.0 # Protein # Eukaryotic elongation factor (eEFSec) # Drosophila melanogaster # Complete (511 letters) Database: T.congolense/genome.fa 11 sequences; 22,287,946 total letters Searching...........done Score E Sequences producing significant alignments: (bits) Value T.congo.pschr4 302 3e-82 TcIL3000_10_v2.embl 102 5e-22 T.congo.pschr.11 91 1e-18 T.congo.pschr.7 65 7e-11 T.congo.pschr.8 56 5e-08 T.congo.pschr2 48 1e-05 T.congo.pschr.9 40 0.002 T.congo.pschr.3. 40 0.002 >T.congo.pschr4 Length = 1343510 Score = 302 bits (773), Expect = 3e-82 Identities = 205/540 (37%), Positives = 289/540 (53%), Gaps = 81/540 (15%) Frame = -3 Query: 2 PINFNIGLLGHVDSGKTTLAKALSSISSTAAFDKNPQSVERGITLDLGFSGLLVD----A 57 P+N NIG+LGHVDSGKT+LAKALS +STAAFDK+P+S RGITLDLGFS V A Sbjct: 360072 PVNINIGILGHVDSGKTSLAKALSLTASTAAFDKSPESQRRGITLDLGFSATCVSTESAA 359893 Query: 58 PAHLPQG-EQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGE 116 PA G + +Q TFVDCPGHASLIRT++GGAQIID+++LV+DA KG QTQTAEC++IGE Sbjct: 359892 PALFALGLKHVQCTFVDCPGHASLIRTVLGGAQIIDVIILVIDACKGVQTQTAECIVIGE 359713 Query: 117 LLQKKLIVVINKIDV---YPENQRASKLEKLRLRLAKTLEATTF-------------GGQ 160 +L K L+VVINKID + ++ + L+KLR RL KT E T + GG Sbjct: 359712 VLNKPLVVVINKIDAVQGLTQAEQRANLDKLRRRLRKTFERTRWPHVSMVEVSAAPRGGS 359533 Query: 161 VP-------ICAVSALQGTHIAELREVLREAYFQPQ--RNLADPLFMYVDHCFGIKGQGT 211 C + G A LR V EA + + ++ + L M VDHCF +KGQGT Sbjct: 359532 AEGDAAVGGHCVPINVDGVLPAALRLVDVEAMKRQRDAQHRPEDLVMMVDHCFALKGQGT 359353 Query: 212 VCTGTLLQGKVQVNNVIELPALGEQRKVKSIQMFRKNVTSASMGDRIGLCVTQFNAKLLE 271 V TGT+L+GKV V + I +P +KVK +Q+FRK V A GDR+GL V QF+A +E Sbjct: 359352 VFTGTILRGKVSVGDSILIPESQVVKKVKGLQVFRKPVQCAGQGDRVGLSVVQFDADGME 359173 Query: 272 RGII-------------TQPG----YLKPIYAVCLQFKPIRYYKEVIKSMRKMHISVGHN 314 RG++ +Q G + + + + +R+++ K HI++GH+ Sbjct: 359172 RGLLCSAVQQHHQRHRSSQQGATSSAFESVSTLIAEVSRVRFHQLACTIHTKFHITIGHS 358993 Query: 315 TVMANVTLF-RDT------------DGTTSTFQLDKEYEYMEDV---------------- 345 TVM ++ F R T F L +E EY+E + Sbjct: 358992 TVMGSMRFFSRPTVTEAGHAGEVADPAAAQPFDLTQESEYVESLGEEAYLTFEAPVEELK 358813 Query: 346 ----QPAEVQHNDVIY-ALLQFESPVLSPPHSTLIASKLDMDVHSTSCRLAFWGRIAWQT 400 P V++ + Y A++ E PV++ + LIA++LD++ CR+A G + Sbjct: 358812 REAGAPVAVKYGPLTYFAIVLLEKPVMAAVGTPLIATRLDVE-QDNMCRIAIAGSVRALL 358636 Query: 401 HSSKYFQEELPKLRIFKRKQKVGSIQRVVNSSEVIVQNLFKDAKRDLYVGKNVELSTGEK 460 H K L I + K + ++RVV+ I + K + G + ST ++ Sbjct: 358635 HDEKADGASWRSLPIIRYKTRTLVVERVVSDRSCIASGVVTVEKHEGGTGGDTSSSTKKR 358456 >TcIL3000_10_v2.embl Length = 3612457 Score = 102 bits (254), Expect = 5e-22 Identities = 89/308 (28%), Positives = 142/308 (46%), Gaps = 32/308 (10%) Frame = -1 Query: 7 IGLLGHVDSGKTTLAKALSSISSTA---------AFDKNPQSVERGITLDLGFSGLLVDA 57 IG +GHVD GKTTL A++++ + A A DK+P+ R IT++ Sbjct: 2929444 IGTIGHVDHGKTTLTSAITTVLAKAGKAQALDYFAIDKSPEEKSRKITINA--------- 2929292 Query: 58 PAHLP-QGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLII-G 115 H+ + E+ + +DCPGH ++ +I GA +D +LVV A G QT E L+I Sbjct: 2929291 -THVEYESEKRHYGHIDCPGHMDFVKNMITGAAQMDGGILVVAANDGCMPQTREHLLICS 2929115 Query: 116 ELLQKKLIVVINKIDVYPENQRASKLEKLRLRLAKTLEATTFGGQ----VPICAVSALQG 171 ++ L+ INK D+ + +E + + L + LE F + V AV AL+G Sbjct: 2929114 QIGLPALVGFINKCDMMQGQE--DMIELVEMELRELLEKYKFPAEETPLVRGSAVKALEG 2928941 Query: 172 -----THIAELREVLREAYFQPQRNLADPLFMYVDHCF--GIKGQGTVCTGTLLQGKVQV 224 I EL E P R P M ++H + G + + TG + QG +++ Sbjct: 2928940 DADSEAKIMELIAKCDEWIPDPPRATEKPFLMPIEHVYEIGKDKKSVIVTGRVDQGLMKI 2928761 Query: 225 NNVIELPALGEQR---KVKSIQMFRKNVTSASMGDRIGLCV------TQFNAKLLERG-I 274 N EL ++ KV I+M+ K + GD +G + T + +ERG + Sbjct: 2928760 NADAELSGFSAKKLSVKVTGIEMYHKTLDECMPGDSVGASIVGTGDTTSLSKDNVERGMV 2928581 Query: 275 ITQPGYLK 282 ++ PG K Sbjct: 2928580 LSAPGATK 2928557 Score = 77.4 bits (189), Expect = 2e-14 Identities = 74/315 (23%), Positives = 130/315 (41%), Gaps = 44/315 (13%) Frame = +1 Query: 3 INFNIGLLGHVDSGKTTLAKAL------------------------SSISSTAAFDKNPQ 38 ++ N+ ++GHVD+GK+T L +S DK Sbjct: 464140 VHMNLVVVGHVDAGKSTATGHLIYKCGGIDKRTIEKFEKEAADIGKASFKYAWVLDKLKA 464319 Query: 39 SVERGITLDLGFSGLLVDAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVV 98 ERGIT+D+ + + FT +D PGH I+ +I G D +L++ Sbjct: 464320 ERERGITIDIALWKF---------ESPKSVFTIIDAPGHRDFIKNMITGTSQADAAILII 464472 Query: 99 DAQKG-------KQTQTAE-CLIIGELLQKKLIVVINKIDVYPENQRASKLEKLRLRLAK 150 + +G K QT E L+ L K+++V NK+D N + +++ ++ Sbjct: 464473 ASAQGEFEAGISKDGQTREHALLAFTLGVKQMVVCCNKMDDKTVNYGQERYDEIVKEVSA 464652 Query: 151 TLEATTFGGQ-VPICAVSALQGTHIAELRE--------VLREAYFQ---PQRNLADPLFM 198 ++ + + V +S QG ++ + + L EA P R PL + Sbjct: 464653 YIKKVGYNVEKVRFVPISGWQGDNMIDKSDKMPWYKGPTLLEALDMLEPPVRPSDKPLRL 464832 Query: 199 YVDHCFGIKGQGTVCTGTLLQGKVQVNNVIELPALGEQRKVKSIQMFRKNVTSASMGDRI 258 + + I G GTV G + G ++ +V+ +VKSI+M + + A+ GD + Sbjct: 464833 PLQDVYKIGGIGTVPVGRVETGVMKPGDVVTFAPANVTTEVKSIEMHHEQLAEATPGDNV 465012 Query: 259 GLCVTQFNAKLLERG 273 G V + K + RG Sbjct: 465013 GFNVKNVSVKDIRRG 465057 Score = 67.0 bits (162), Expect = 2e-11 Identities = 57/228 (25%), Positives = 101/228 (44%), Gaps = 20/228 (8%) Frame = +2 Query: 66 QLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKG-------KQTQTAE-CLIIGEL 117 Q FT +D PGH I+ +I G D +L++ + +G K QT E L+ L Sbjct: 461984 QSVFTIIDAPGHRDFIKNMITGTSQADAAILIIASAQGEFEAGISKDGQTREHALLAFTL 462163 Query: 118 LQKKLIVVINKIDVYPENQRASKLEKLRLRLAKTLEATTFGGQ-VPICAVSALQGTHIAE 176 K+++V NK+D N + +++ ++ ++ + + V +S QG ++ + Sbjct: 462164 GVKQMVVCCNKMDDKTVNYGQERYDEIVKEVSAYIKKVGYNVEKVRFVPISGWQGDNMID 462343 Query: 177 LRE--------VLREAYFQ---PQRNLADPLFMYVDHCFGIKGQGTVCTGTLLQGKVQVN 225 + L EA P R PL + + + I G GTV G + G ++ Sbjct: 462344 KSDKMPWYKGPTLLEALDMLEPPVRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVMKPG 462523 Query: 226 NVIELPALGEQRKVKSIQMFRKNVTSASMGDRIGLCVTQFNAKLLERG 273 +V+ +VKSI+M + + A+ GD +G V + K + RG Sbjct: 462524 DVVTFAPANVTTEVKSIEMHHEQLAEATPGDNVGFNVKNVSVKDIRRG 462667 Score = 46.2 bits (108), Expect = 4e-05 Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 14/139 (10%) Frame = -3 Query: 6 NIGLLGHVDSGKTTLAKAL---------SSISSTAAFDKNPQSVERGITLDLGFSGLLVD 56 N+ ++ HVD GK+TL+ +L D + RGIT+ + Sbjct: 1011248 NMSVIAHVDHGKSTLSDSLVGAAGIIKMEDAGDKRIMDTRADEIARGITIKSTAISMHYH 1011069 Query: 57 AP----AHLPQGEQ-LQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAEC 111 P + LP + +D PGH + ++ D L+VVD +G QT Sbjct: 1011068 VPPEIISDLPDDRRDFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVEGVCVQTETV 1010889 Query: 112 LIIGELLQKKLIVVINKID 130 L + + +V INK+D Sbjct: 1010888 LRQALTERIRPVVFINKVD 1010832 Score = 46.2 bits (108), Expect = 4e-05 Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 14/139 (10%) Frame = -2 Query: 6 NIGLLGHVDSGKTTLAKAL---------SSISSTAAFDKNPQSVERGITLDLGFSGLLVD 56 N+ ++ HVD GK+TL+ +L D + RGIT+ + Sbjct: 1009101 NMSVIAHVDHGKSTLSDSLVGAAGIIKMEDAGDKRIMDTRADEIARGITIKSTAISMHYH 1008922 Query: 57 AP----AHLPQGEQ-LQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAEC 111 P + LP + +D PGH + ++ D L+VVD +G QT Sbjct: 1008921 VPPEIISDLPDDRRDFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVEGVCVQTETV 1008742 Query: 112 LIIGELLQKKLIVVINKID 130 L + + +V INK+D Sbjct: 1008741 LRQALTERIRPVVFINKVD 1008685 Score = 41.6 bits (96), Expect = 0.001 Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 18/159 (11%) Frame = +1 Query: 6 NIGLLGHVDSGKTTLAKAL--------------SSISSTAAFDKNPQSVERGITLDLGFS 51 N+G+ H+DSGKTT+ + + A D ERGIT+ Sbjct: 1080697 NVGISAHIDSGKTTVTERILFYTGRIDKIHEVKGGTEVGATMDSMELEKERGITIR---- 1080864 Query: 52 GLLVDAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAEC 111 A GE L +D PGH + +++D ++++ G Q+QT Sbjct: 1080865 ----SAATQCKWGEHL-INIIDTPGHVDFTIEVERALRVLDGAIMLMCGVGGVQSQT--- 1081020 Query: 112 LIIGELLQK---KLIVVINKIDVYPEN-QRASKLEKLRL 146 L + +++ + INK+D N +RA K+ + RL Sbjct: 1081021 LTVDRQMRRYGVPRVCFINKLDRDNANPRRALKMARERL 1081137 Score = 30.0 bits (66), Expect = 3.1 Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 16/91 (17%) Frame = +1 Query: 285 YAVCLQFKPIRYYKEVIKSMRKMHISVGHNT----------VMANVTLFRDTDGTTSTF- 333 Y+ L KP R + +++R++ +++ +N +M + FRDTD T T+ Sbjct: 647371 YSFVLVMKP-RQKRFTSQALREIGVAIFNNGGLIRSMRNEGIMRPYSRFRDTDNTPLTYA 647547 Query: 334 -----QLDKEYEYMEDVQPAEVQHNDVIYAL 359 QLD E M V +H DV+ L Sbjct: 647548 RYVTLQLDMGEEEMRKVDKIIREHQDVLMTL 647640 Score = 28.5 bits (62), Expect = 9.0 Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 8/59 (13%) Frame = -3 Query: 366 VLSPPHSTL--------IASKLDMDVHSTSCRLAFWGRIAWQTHSSKYFQEELPKLRIF 416 VLS PH+++ + L M V C+ FW W + S K F P +RIF Sbjct: 2901602 VLSLPHNSMRVWTTIWQMMGMLMMKVKK*KCQNRFWRGSVWIS*SWKVFVSPPPMIRIF 2901426 >T.congo.pschr.11 Length = 4797796 Score = 90.9 bits (224), Expect = 1e-18 Identities = 80/260 (30%), Positives = 120/260 (46%), Gaps = 35/260 (13%) Frame = -1 Query: 6 NIGLLGHVDSGKTTLAKALSSISSTAAFDKNPQSVERGITLDLGFSGLLV---------D 56 NIG +GHV GK+T+ KALS + + K + IT+ LG++ V D Sbjct: 3748699 NIGTIGHVAHGKSTVVKALSGVKT----QKYHREAVMNITIHLGYANAKVFLCGSCPLPD 3748532 Query: 57 APAHLPQGE---------------QLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQ 101 A P + + F+FVDCPGH L+ T++ GA I+D LL++ A Sbjct: 3748531 AYHAFPSSQPDNTNCPTCRAPLTLKRHFSFVDCPGHDVLMATMLNGAAIMDAALLLIAAN 3748352 Query: 102 KG-KQTQTAECLIIGELLQ-KKLIVVINKIDVYPENQRASKLEKLRLRLAKTLEATTFGG 159 + Q QT E L E+++ + LI++ NKID+ E + K+R + T+ G Sbjct: 3748351 EPFPQPQTLEHLKAVEIMKLRNLIILQNKIDLVGEVHAQDQYHKIRNYIDSTI-----GL 3748187 Query: 160 QVPICAVSALQGTHIAELREVLREAYFQPQRNLADPLFMYVDHCFGIKG---------QG 210 PI +SA ++ L E L P R L P M V F I +G Sbjct: 3748186 SAPIIPISAQLKRNVDYLLEYLCRMPL-PTRQLKCPARMTVVRSFDINKPGEVDIENLRG 3748010 Query: 211 TVCTGTLLQGKVQVNNVIEL 230 V GT+ QG ++VN ++E+ Sbjct: 3748009 GVAGGTVTQGVLRVNQIVEI 3747950 Score = 60.5 bits (145), Expect = 2e-09 Identities = 42/131 (32%), Positives = 63/131 (48%), Gaps = 6/131 (4%) Frame = -1 Query: 6 NIGLLGHVDSGKTTLAKALSSISSTAA------FDKNPQSVERGITLDLGFSGLLVDAPA 59 NI ++ HVD GKTTL + S T D Q ERGIT+ + +L+ Sbjct: 12520 NIAVIAHVDHGKTTLVDEMLKQSETLVEARNRVMDSKDQEKERGITILAKNTAVLLPTQE 12341 Query: 60 HLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGELLQ 119 G Q + VD PGH + Q+++ ++L+VDA++G + T L ++ Sbjct: 12340 G---GPQRRINIVDTPGHLDFSGEVERALQMVEGIILLVDAKEGVRPGTRYVLRKSLAMR 12170 Query: 120 KKLIVVINKID 130 K IV +NKID Sbjct: 12169 LKPIVCLNKID 12137 Score = 59.7 bits (143), Expect = 4e-09 Identities = 82/406 (20%), Positives = 160/406 (39%), Gaps = 38/406 (9%) Frame = -1 Query: 4 NFNIGLLGHVDSGKTTLAKAL---SSISSTAAFDKNPQSVE------------RGITLDL 48 +FNI GHVD+GK+T++ L + DK + E ++ D Sbjct: 1805674 HFNIVFCGHVDAGKSTISGHLLMEKGLVDQREMDKLRREAEIHHREGWEYAYVMDVSEDE 1805495 Query: 49 GFSGLLVDAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKG----- 103 G+ + A + ++ + T +D PGH + + ++IGGA D+ +LV+ ++ G Sbjct: 1805494 RMKGITRETGAAYVETDKRRITVLDAPGHKAFVPSMIGGATQADVCVLVISSRTGEFETG 1805315 Query: 104 --KQTQTAE-CLIIGELLQKKLIVVINKIDV--YPENQRASKLEKLRLRLAKTLEATTFG 158 K QT E +++ K++I VINK+D + +++ + L +L+ L + Sbjct: 1805314 FEKGGQTREHAMLVRTCGVKQMICVINKMDEVGWSKDRYDTILGRLKPFLRQNGYDEEKA 1805135 Query: 159 GQVPICAVSALQGTHIAELREVLREAYFQP-QRNLADPL----------FMYVDHCFGIK 207 + ++ L G ++ E + Y P + D L + + K Sbjct: 1805134 KNLIFIPIAGLTGDNLIRKAEAVCPWYTGPTMMDFIDDLVLPETKSETDILCIPLVGAYK 1804955 Query: 208 GQGTVCT-GTLLQGKVQVNNVIELPALGEQRKVKSIQMFRKNVTSASMGDRIGLCVTQFN 266 +G V G + G V I++ ++ V+ I + GD + L V + Sbjct: 1804954 DEGRVFVYGKVESGSAAVGEKIQILPTKQEAIVEGISIEATEFEKCYPGDNVHLRVRGVD 1804775 Query: 267 AKLLERGIITQPGYLKPIYAVCLQFKPIRYYK-EVIKSMRKMHISVGHNTVMANVTLFRD 325 + G + +V + + Y++ V+ K I G +M + Sbjct: 1804774 ESDVHSGYVAT--------SVPTSLRAVEYFQARVVILDVKNIICAGSRVMMHAHAAQEE 1804619 Query: 326 TDGTTSTFQLDKEYEYMEDVQPAEVQHNDVIYALLQFESPVLSPPH 371 ++DK+ + P V+ DV+ A ++ E ++ PH Sbjct: 1804618 VSFHKLLAKVDKKTGEVVQKDPTHVKAGDVVIARMELERSLVLEPH 1804481 Score = 55.1 bits (131), Expect = 9e-08 Identities = 53/170 (31%), Positives = 81/170 (47%), Gaps = 6/170 (3%) Frame = -1 Query: 9 LLGHVDSGKTTLAKALSSISSTAAFDKNPQSVERGITLDLGFSGLLVDAPAHLPQGEQLQ 68 ++GH+ GKT+L LS + A+ + +ERGI+L +V A AH Q L Sbjct: 3873304 VVGHLHHGKTSL---LSLLLGGRAYRQREDEIERGISLKSSVVTEVV-AGAHYHQTSHL- 3873140 Query: 69 FTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGELLQKK--LIVVI 126 TFVD PGH +++D L VDA + A L+ +LQ+ +++VI Sbjct: 3873139 VTFVDTPGHPDFAAETAAALRLVDAALFCVDAAESLTANGAR-LLRQVVLQESIPIVLVI 3872963 Query: 127 NKIDVYPENQRASKLE---KLRLRL-AKTLEATTFGGQVPICAVSALQGT 172 KID + + L+ K+R+ + A E ++FG VS L GT Sbjct: 3872962 TKIDRLIMDLKLPPLDAYRKIRMTVDAVNNEISSFGSVCSPFLVSPLNGT 3872813 Score = 53.5 bits (127), Expect = 3e-07 Identities = 47/189 (24%), Positives = 82/189 (43%), Gaps = 21/189 (11%) Frame = +2 Query: 6 NIGLLGHVDSGKTT-------LAKALSSI----SSTAAFDKNPQSVERGITLDLGFSGLL 54 NIG++ H+D+GKTT A A+ + S T D + V+RGIT Sbjct: 2562893 NIGIVAHIDAGKTTTTERMLYYAGAVGRVGDVDSGTTTTDFMKEEVDRGIT--------- 2563045 Query: 55 VDAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLII 114 + + A + + +D PGH + +++D ++ + DA G Q Q+ L Sbjct: 2563046 IQSAAVSFKWREHNIHLIDTPGHVDFTVELERAMRVVDGVVALFDASAGVQAQSYTVLQQ 2563225 Query: 115 GELLQKKLIVVINKIDVYPENQRAS--------KLEKLRLRLAKTLEATTFGGQVPICAV 166 + +I +NK+D Y N + S +E L L+L + E +F G + + + Sbjct: 2563226 SKKFDVPVIGFLNKMDKYNANFKRSVDSIRTKLNMEPLLLQLPLSSEDGSFEGVIDVVEL 2563405 Query: 167 SALQ--GTH 173 + G+H Sbjct: 2563406 KVCRFGGSH 2563432 Score = 32.3 bits (72), Expect = 0.62 Identities = 43/186 (23%), Positives = 83/186 (44%), Gaps = 11/186 (5%) Frame = -1 Query: 7 IGLLGHVDSGKTTLAKALSSISSTAAFDKN--PQSVERGITLDLGFSGLLVDAP-AHLPQ 63 + ++G +SGKT+L ALS A +++ + +G+T +L+D P + Sbjct: 81337 VSIVGPQNSGKTSLLNALSLSHVGAVSNRSGVTRDWTKGVTTVHNTQLVLLDTPGVVICN 81158 Query: 64 GEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKG-----KQTQTAECLIIGELL 118 GE+ D HA+ + + DL+LL + A G ++T E + L Sbjct: 81157 GEK------DRRRHATPVARTWDAFTVTDLVLLTLPAGLGFVEPEQKTVAREVVRRASLR 80996 Query: 119 QKKLIVVINKIDVYPENQRASKLEKLRLRLAKTLEATTFGGQVPICAVSALQ---GTHIA 175 + +++V+ +D + + +L + LE+ ++PI VS GT + Sbjct: 80995 RMPVVLVVTMMD----KVQTPRHRELYFAMRTDLESM----RLPIACVSETSVKGGTGLV 80840 Query: 176 ELREVL 181 EL+++L Sbjct: 80839 ELKDLL 80822 >T.congo.pschr.7 Length = 2148087 Score = 65.5 bits (158), Expect = 7e-11 Identities = 54/176 (30%), Positives = 78/176 (44%), Gaps = 1/176 (0%) Frame = -1 Query: 7 IGLLGHVDSGKTTLAKALSSISSTAAFDKNPQSVERGITLDLGFSGLLVDAPAHLPQGEQ 66 + ++GHVD GKTTL L + + S GIT ++G + V + Sbjct: 830790 VSIMGHVDHGKTTLLDHLRKTNVAS-------SEAGGITQNVGAFQVKVPGDKFI----- 830647 Query: 67 LQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGELLQKKLIVVI 126 TF+D PGHA+ GA DL++LVV A G Q QT E + + L +V Sbjct: 830646 ---TFIDTPGHAAFTTMREAGAAANDLIILVVSAVDGVQLQTKEVIGLAHKLGIPFVVAC 830476 Query: 127 NKIDVYPENQRASKLEKLRLRLAK-TLEATTFGGQVPICAVSALQGTHIAELREVL 181 KID R S +E ++ +L +E GG V V A G + EL + + Sbjct: 830475 TKID------RQSNVEDVKRQLRNCNVELEEDGGDVQFVPVCARDGRGVPELLDAV 830326 Score = 28.9 bits (63), Expect = 6.9 Identities = 18/53 (33%), Positives = 29/53 (54%) Frame = -2 Query: 367 LSPPHSTLIASKLDMDVHSTSCRLAFWGRIAWQTHSSKYFQEELPKLRIFKRK 419 L P TL+ASK+ + H+ S R W +W T ++ Q+ + +LRI R+ Sbjct: 154475 LVPFTVTLLASKITIR-HACSIR-PLWSNSSWNTK*RRWKQKRMAQLRIVPRR 154323 >T.congo.pschr.8 Length = 2451971 Score = 55.8 bits (133), Expect = 5e-08 Identities = 38/133 (28%), Positives = 58/133 (43%) Frame = -1 Query: 7 IGLLGHVDSGKTTLAKALSSISSTAAFDKNPQSVERGITLDLGFSGLLVDAPAHLPQGEQ 66 I +LGH GKTTL AL + A R T+ P H + Sbjct: 1919267 IAVLGHTQHGKTTLLDALQKTNIRAEESHGVTQCLRAFTI-----------PPHSDFHKA 1919121 Query: 67 LQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGELLQKKLIVVI 126 + TF+D PG I D +++V A G ++QT E + + + K ++VVI Sbjct: 1919120 I--TFIDTPGERLFTEARFHALNIADFAVVIVSAIDGVRSQTYEAIKVALNVDKPIVVVI 1918947 Query: 127 NKIDVYPENQRAS 139 NK+D++ +AS Sbjct: 1918946 NKMDLFSSTYKAS 1918908 >T.congo.pschr2 Length = 799489 Score = 48.1 bits (113), Expect = 1e-05 Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 10/132 (7%) Frame = -1 Query: 9 LLGHVDSGKTTLAKALSSISSTAAFDKNPQSVERG-ITLDLGFSGL----LVDAPAHLPQ 63 +LGHVD+GKT+L L I +T N Q E G IT +G + L +A L + Sbjct: 353200 VLGHVDTGKTSL---LDRIRAT-----NVQGGEAGGITQQIGATFFPRESLFEATQELNK 353045 Query: 64 GEQLQFTF-----VDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGELL 118 + + +D PGH S G+ + D+ +LV+D G + QT E + + Sbjct: 353044 KYKHELNVPGLLVIDTPGHESFTNLRSRGSSLCDIAILVIDIMHGLEPQTRESIRLLRER 352865 Query: 119 QKKLIVVINKID 130 + I+ +NK+D Sbjct: 352864 RCPFIIALNKVD 352829 Score = 28.5 bits (62), Expect = 9.0 Identities = 25/92 (27%), Positives = 40/92 (43%) Frame = -1 Query: 9 LLGHVDSGKTTLAKALSSISSTAAFDKNPQSVERGITLDLGFSGLLVDAPAHLPQGEQLQ 68 L+G SGKTTL L + A + RG D+ SG +A + Sbjct: 404800 LVGMAGSGKTTLFAQLVAGKRVAV--RTSMEANRG---DVKASGSTDNADS---SQVSTG 404645 Query: 69 FTFVDCPGHASLIRTIIGGAQIIDLMLLVVDA 100 T +D PGH L +++ + + ++ VVD+ Sbjct: 404644 VTLIDFPGHRRLRESLLEAVEEVKKVIFVVDS 404549 >T.congo.pschr.9 Length = 2092392 Score = 40.4 bits (93), Expect = 0.002 Identities = 38/155 (24%), Positives = 63/155 (40%), Gaps = 6/155 (3%) Frame = -3 Query: 55 VDAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDA-----QKGKQTQTA 109 +D+ ++ + E +D PGH + + A D LLVV A + G T Sbjct: 1346137 IDSGSYWFETEHRAHYVLDAPGHRDYVLNMTSSATQADAALLVVTAAFSEFEVGLAHGTK 1345958 Query: 110 ECLIIGELLQ-KKLIVVINKIDVYPENQRASKLEKLRLRLAKTLEATTFGGQVPICAVSA 168 + L++ ++L L+V +NK+D +Q L+L V C VS Sbjct: 1345957 DHLVVLKILGIGHLVVAVNKMDTVGYSQERYDTVVRELKLLLKQFRFKDDAVVGFCPVSG 1345778 Query: 169 LQGTHIAELREVLREAYFQPQRNLADPLFMYVDHC 203 ++GT+I++ Y P PL +D C Sbjct: 1345777 MKGTNISKTDSASTPWYTGP------PLLELLDRC 1345691 >T.congo.pschr.3. Length = 1451265 Score = 40.4 bits (93), Expect = 0.002 Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 11/164 (6%) Frame = -3 Query: 6 NIGLLGHVDSGKTTLAKALSSISSTAA---------FDKNPQSVERGITLDLGFSGLLVD 56 N ++ HVD GKTTL+ L + + + D P ER IT+ L Sbjct: 432607 NFCVVAHVDHGKTTLSDYLVASNGILSPQLAGEVRLLDSRPDEQERRITMKASSVVL--- 432437 Query: 57 APAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGE 116 H+ + VD PGH + ++ D +++VD G Q+ L Sbjct: 432436 --RHVHEDVVHLLNLVDSPGHIDFSCEVSTAMRLCDGAVVIVDVVDGVTQQSGGILRHAY 432263 Query: 117 LLQKKLIVVINKIDVYPENQRASKLEK-LRLR-LAKTLEATTFG 158 + +V+NK+D+ Q+ + E R+R + +T AT G Sbjct: 432262 REGLSMCLVLNKVDLLITVQQLTPEEAYYRMRSIIETCNATLAG 432131 Database: T.congolense/genome.fa Posted date: Nov 21, 2011 7:47 PM Number of letters in database: 22,287,946 Number of sequences in database: 11 Lambda K H 0.320 0.136 0.388 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 11,460,748 Number of Sequences: 11 Number of extensions: 170134 Number of successful extensions: 728 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 492 Number of HSP's gapped (non-prelim): 513 length of query: 511 length of database: 7,429,315 effective HSP length: 102 effective length of query: 409 effective length of database: 7,428,193 effective search space: 3038130937 effective search space used: 3038130937 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 62 (28.5 bits)