TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SPP00000092_1.0 # Protein # Eukaryotic elongation factor (eEFSec) # Drosophila melanogaster # Complete (511 letters) Database: P.capsici/genome.fa 917 sequences; 64,023,748 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PHYCAscaffold_13 292 7e-79 PHYCAscaffold_87 122 1e-27 PHYCAscaffold_70 83 1e-15 PHYCAscaffold_41 80 7e-15 PHYCAscaffold_7 53 1e-13 PHYCAscaffold_21 69 2e-11 PHYCAscaffold_3 61 5e-09 PHYCAscaffold_102 60 6e-09 PHYCAscaffold_79 58 4e-08 PHYCAscaffold_27 55 3e-07 PHYCAscaffold_12 53 1e-06 PHYCAscaffold_54 52 3e-06 PHYCAscaffold_60 51 4e-06 PHYCAscaffold_11 42 0.002 PHYCAscaffold_105 37 0.071 PHYCAscaffold_55 32 2.3 PHYCAscaffold_122 30 6.6 >PHYCAscaffold_13 Length = 1060349 Score = 292 bits (748), Expect = 7e-79 Identities = 173/425 (40%), Positives = 249/425 (58%), Gaps = 13/425 (3%) Frame = -2 Query: 3 INFNIGLLGHVDSGKTTLAKALSSISSTAAFDKNPQSVERGITLDLGFSGLLVDAPAHLP 62 +N N+G+LGHVDSGKT+L +ALS+ STAA DK+PQS +RGITLDLGFS L+ A + Sbjct: 812257 LNVNVGVLGHVDSGKTSLVRALSTQLSTAALDKHPQSQQRGITLDLGFSSFLLKPSAQVK 812078 Query: 63 QGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGELLQKKL 122 LQ T VDCPGHASL RTI+GG IID +LLV+D +KG Q QT E L++ L+ K+ Sbjct: 812077 PC--LQVTLVDCPGHASLFRTILGGVAIIDTVLLVIDCRKGLQAQTIESLLLATLIAKRS 811904 Query: 123 IVV-INKIDVYPENQRASKLEKLRLRLAKTLEATTFGGQ-------VPICAVSALQGTHI 174 +VV + K D+ P +R + + K + ++ AT F VP+ S I Sbjct: 811903 VVVALTKTDLVPSAERDNVIGKCSHEV-RSFMATNFNFHDTSSIPVVPVAVGSNQDPQGI 811727 Query: 175 AELREVLREAYFQPQRNLADPLFMYVDHCFGIKGQGTVCTGTLLQGKVQVNNVIELPALG 234 +L E L P+R+ + + VDHCF + G GT+ TGT+L G ++ + +EL LG Sbjct: 811726 PQLLEALNANLQVPERDHSGSFCLAVDHCFSVPGNGTILTGTVLSGALERGDELELLPLG 811547 Query: 235 EQRKVKSIQMFRKNVTSASMGDRIGLCVTQFNAKLLERGI-ITQPGYLKPIYAVCLQFKP 293 + KVK++Q+F+K+V S GDR+GL V + L+ER + ++ PG L P+ V + Sbjct: 811546 AKVKVKTLQVFKKDVAKCSQGDRVGLRVNGLDPALVERALAVSPPGSLTPVTQVVIPVTK 811367 Query: 294 IRYYKEV-IKSMRKMHISVGHNTVMANVTLFR---DTDGTTSTFQLDKEYEYMEDVQPAE 349 + ++ E+ KS K H++VGH T++A T F G + F YEY+E++ + Sbjct: 811366 VPFFHEISCKSGGKCHVTVGHTTIIAMATFFTCLGGDKGDETGFNPSALYEYVEELSDEK 811187 Query: 350 VQHNDVIYALLQFESPVLSPPHSTLIASKLDMDVHSTSCRLAFWGRIAWQTHSSKYFQEE 409 +I+ALLQFE V PP + ++ S++D+D CRLAF+G I SS EE Sbjct: 811186 EAEEGMIFALLQFEQAVFCPPKTLVVCSRMDLDAKRFPCRLAFYGVIQGVVGSS---DEE 811016 Query: 410 LPKLR 414 L LR Sbjct: 811015 LRALR 811001 >PHYCAscaffold_87 Length = 182599 Score = 122 bits (306), Expect = 1e-27 Identities = 92/305 (30%), Positives = 149/305 (48%), Gaps = 25/305 (8%) Frame = -3 Query: 4 NFNIGLLGHVDSGKTTLAKALSSI---------SSTAAFDKNPQSVERGITLDLGFSGLL 54 + N+G +GHVD GKTTL A++ + +S A DK P+ RGIT+ Sbjct: 97790 HLNVGTIGHVDHGKTTLTAAITKVLSETGGAEFTSYADIDKAPEERARGITI-------- 97635 Query: 55 VDAPAHLP-QGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLI 113 + AH+ + + + VDCPGHA ++ +I GA +D +LVV A G QT E ++ Sbjct: 97634 --STAHVEYETSKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAGDGPMPQTREHIL 97461 Query: 114 IG-ELLQKKLIVVINKIDVYPENQRASKLEKLRLRLAKTLEATTF-GGQVPICAVSALQG 171 + ++ L+V +NK+D + + LE + + + + LEA F +P+ SAL Sbjct: 97460 LARQVGVPALVVFMNKVDQVDDEE---LLELVEMEIRELLEAYDFPADDIPVVQGSALAA 97290 Query: 172 T----HIAELREVLR-----EAYF-QPQRNLADPLFMYVDHCFGIKGQGTVCTGTLLQGK 221 H VL+ +AY P R+ P M V+ F I G+GTV +G + QG Sbjct: 97289 VEDRDHNIGRDAVLKLMDEVDAYIPDPVRDFEKPFLMPVEDVFSISGRGTVVSGRVEQGV 97110 Query: 222 VQVNNVIELPALGEQRKV--KSIQMFRKNVTSASMGDRIGLCVTQFNAKLLERG-IITQP 278 + + +EL L K ++MF+K++ GD +GL + + RG ++ +P Sbjct: 97109 INTGDEVELVGLKPSSKTTCTGVEMFKKSLDRGQAGDNVGLLLRGLKRDEVLRGQVLCKP 96930 Query: 279 GYLKP 283 G + P Sbjct: 96929 GTINP 96915 >PHYCAscaffold_70 Length = 280435 Score = 82.8 bits (203), Expect = 1e-15 Identities = 78/318 (24%), Positives = 138/318 (43%), Gaps = 45/318 (14%) Frame = +1 Query: 3 INFNIGLLGHVDSGKTTLA-------------------KALSSISSTA-----AFDKNPQ 38 ++ ++ ++GHVD+GK+T K + + T+ D Sbjct: 109288 VHISLVVIGHVDAGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKTSFKYAWVLDNLKA 109467 Query: 39 SVERGITLDLGFSGLLVDAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVV 98 ERGIT+D+ ++P + FT +D PGH I+ +I G D +LVV Sbjct: 109468 ERERGITIDIALWKF--ESPKYF-------FTVIDAPGHRDFIKNMITGTSQADCAILVV 109620 Query: 99 DAQKG-------KQTQTAE-CLIIGELLQKKLIVVINKIDVYPENQRASKLEKLRLRLAK 150 + G K+ QT E L+ L K++IV INK+D ++ E+++ + Sbjct: 109621 ASGVGEFEAGISKEGQTREHALLAFTLGVKQMIVAINKMDDSSVMYGQARYEEIKNEVTT 109800 Query: 151 TLEATTFG-GQVPICAVSALQGTHIAE------------LREVLREAYFQPQRNLADPLF 197 L+ + ++P +S +G ++ + L E L + P+R + PL Sbjct: 109801 YLKKVGYKPAKIPFVPISGWEGDNMIDRSTNMPWYKGPYLLEAL-DNLNAPKRPVDKPLR 109977 Query: 198 MYVDHCFGIKGQGTVCTGTLLQGKVQVNNVIELPALGEQRKVKSIQMFRKNVTSASMGDR 257 + + + I G GTV G + G ++ V +G +VKS++M +++ A GD Sbjct: 109978 LPLQDVYKIGGIGTVPVGRVETGVIKPGMVATFGPVGLSTEVKSVEMHHESLPEAVPGDN 110157 Query: 258 IGLCVTQFNAKLLERGII 275 +G V + K L RG + Sbjct: 110158 VGFNVKNVSVKELRRGFV 110211 >PHYCAscaffold_41 Length = 565801 Score = 80.1 bits (196), Expect = 7e-15 Identities = 71/284 (25%), Positives = 131/284 (46%), Gaps = 39/284 (13%) Frame = -1 Query: 6 NIGLLGHVDSGKTTLAKALSSISSTAAFDKNPQSVERGITLDLGFSGLLV---------- 55 NIG +GHV GK+T+ KA+S + + + +ER IT+ LG++ + Sbjct: 339676 NIGTIGHVAHGKSTVVKAISGVQTV----RFKNELERNITIKLGYANAKIYRAENGTGIG 339509 Query: 56 -------DAPAHLPQGE--------QLQFTFVDCPGHASLIRTIIGGAQIID-LMLLVVD 99 P Q +FVDCPGH L+ T++ GA ++D +LLV Sbjct: 339508 CYRAFGSSKPDRFVDENDEKTTWVLQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAG 339329 Query: 100 AQKGKQTQTAECLIIGELLQ-KKLIVVINKIDVYPENQRASKLEKLRLRLAKTLEATTFG 158 + Q QT+E L E+++ + +I++ NK+D+ E+ ++ E++ K A T Sbjct: 339328 NEVCPQPQTSEHLAAIEIMRLQNIIILQNKVDLIKEDAAVAQHEQI-----KKFVAGTVA 339164 Query: 159 GQVPICAVSALQGTHIAELREVLREAYFQPQRNLADPLFMYVDHCFGIKG--------QG 210 PI +SA+ ++ + E + P+R+ + V F + +G Sbjct: 339163 HDAPIIPISAVLKYNVDVVCEYICRNIPIPKRDFTSKPKLIVIRSFDVNKPGEDVENLKG 338984 Query: 211 TVCTGTLLQGKVQVNNVIE----LPALGEQRKVKSIQMFRKNVT 250 V G++L+G ++V + IE + + E+ K+ + +F + V+ Sbjct: 338983 GVAGGSILEGVLRVGDEIEVRPGIVSKDEEGKMTCVPIFSRIVS 338852 >PHYCAscaffold_7 Length = 1368812 Score = 52.8 bits (125), Expect(2) = 1e-13 Identities = 49/207 (23%), Positives = 90/207 (43%), Gaps = 33/207 (15%) Frame = +1 Query: 3 INFNIGLLGHVDSGKTTLA-------------------KALSSISSTA-----AFDKNPQ 38 ++ ++ ++GHVD+GK+T K + + T+ D Sbjct: 1124962 VHISLVVIGHVDAGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKTSFKYAWVLDNLKA 1125141 Query: 39 SVERGITLDLGFSGLLVDAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVV 98 ERGIT+D+ ++P + FT +D PGH I+ +I G D +LVV Sbjct: 1125142 ERERGITIDIALWKF--ESPKYF-------FTVIDAPGHRDFIKNMITGTSQADCAILVV 1125294 Query: 99 -------DAQKGKQTQTAE-CLIIGELLQKKLIVVINKIDVYPENQRASKLEKLRLRLAK 150 +A K+ QT E L+ L K++IV INK+D ++ E+++ + Sbjct: 1125295 ASGVGEFEAGISKEGQTREHALLAFTLGVKQMIVAINKMDDSSVMYGQARYEEIKNEVTT 1125474 Query: 151 TLEATTF-GGQVPICAVSALQGTHIAE 176 L+ + ++P +S +G ++ + Sbjct: 1125475 YLKKVGYKPAKIPFVPISGWEGDNMID 1125555 Score = 43.5 bits (101), Expect(2) = 1e-13 Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 3/92 (3%) Frame = +3 Query: 187 QPQRNLAD---PLFMYVDHCFGIKGQGTVCTGTLLQGKVQVNNVIELPALGEQRKVKSIQ 243 QP+R A PL + + + I G GTV G + G ++ V +G +VKS++ Sbjct: 1125609 QPERP*ASGDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVATFGPVGLSTEVKSVE 1125788 Query: 244 MFRKNVTSASMGDRIGLCVTQFNAKLLERGII 275 M +++ A GD +G V + K L RG + Sbjct: 1125789 MHHESLPEAVPGDNVGFNVKNVSVKELRRGFV 1125884 >PHYCAscaffold_21 Length = 930814 Score = 68.6 bits (166), Expect = 2e-11 Identities = 53/165 (32%), Positives = 80/165 (48%), Gaps = 1/165 (0%) Frame = -3 Query: 7 IGLLGHVDSGKTTLAKALSSISSTAAFDKNPQSVERGITLDLGFSGLLVDAPAHLPQGEQ 66 + ++GHVD GKTTL AL S AA + GIT +G VD G Sbjct: 121679 VSVMGHVDHGKTTLLDALRK-SKVAASEAG------GITQRIG--AFSVDMGKKF--GSH 121533 Query: 67 LQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGELLQKKLIVVI 126 + TF+D PGHA+ G+++ DL++LVV A G + QT E + LIV + Sbjct: 121532 AKVTFIDTPGHAAFSNMRSRGSELTDLLVLVVAADDGVRPQTVEVARLALKNNVPLIVAV 121353 Query: 127 NKIDVYPENQRASKLEKLRLRLAKT-LEATTFGGQVPICAVSALQ 170 K+D++ E+ + +L L + + + GG+ P+ VS Q Sbjct: 121352 TKMDMH-EHDKVEVTNRLGSELLEQGIVVESMGGETPMVCVSGKQ 121221 Score = 36.2 bits (82), Expect = 0.12 Identities = 44/192 (22%), Positives = 74/192 (38%), Gaps = 48/192 (25%) Frame = +2 Query: 7 IGLLGHVDSGKTTLAKAL-------SSISSTAAFDKNPQSVERGITLDLGFSGLLVDAP- 58 + +G+VDSGK++L L SS A ++ +E G T + + L D Sbjct: 172196 LAFVGNVDSGKSSLIGTLIKGDLDDGRGSSRQAIFRHKHEIESGRTSSVATAYLGFDETG 172375 Query: 59 --------------AHLPQGEQLQFTFVDCPGHASLIRTIIGGAQII--DLMLLVVDAQK 102 A L + + +D GH ++T + G + D++++VV A Sbjct: 172376 EQILSKRAGKLIPWAELAKMAHKRIQLIDLAGHEKYLKTTVFGLTGMQPDVVVVVVGANM 172555 Query: 103 GKQTQTAECLII----GEL--------------------LQKKLIVVINKIDVYPENQRA 138 G + T E L I GE L+ ++V + KID+ P+N Sbjct: 172556 GVKRMTKEHLAIAVAVGEFVGHCEKMDVDIDVCWCDSLQLEIPIVVALTKIDIAPKNVAK 172735 Query: 139 SKLEKLRLRLAK 150 L +R L + Sbjct: 172736 ETLATVRQALRR 172771 >PHYCAscaffold_3 Length = 1611504 Score = 60.8 bits (146), Expect = 5e-09 Identities = 63/233 (27%), Positives = 105/233 (45%), Gaps = 16/233 (6%) Frame = +1 Query: 7 IGLLGHVDSGKTTLAKAL-----SSISSTAAFDKNPQSVERGITLDLGFSGLLVDAPAHL 61 I ++GHVD GKTTL L + + A ++K+ GIT + V A Sbjct: 484075 IAVMGHVDHGKTTLMDTLRKQMKAGLKQIAPYEKH------GITQKIN-----VCEAALT 484221 Query: 62 PQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGELLQKK 121 P ++ TF+D PGH R AQ+ D +LL+V A +G QT E + E Sbjct: 484222 PD---VKTTFLDTPGHFHFFRMRTSAAQVADAVLLIVAADEGVLLQTEESIGAIEEAGLP 484392 Query: 122 LIVVINKIDVYPENQRASKLEKL--RLRLAKTLEATTFGGQVPICAVSALQGTHIAELRE 179 ++ INK+D+ E+ +++K+ LR L+ + P+ +S G + +L++ Sbjct: 484393 AVICINKVDLLGEDD-DGQVDKIVDELRSFVALQDS------PVLTISGKTGAGLDDLKQ 484551 Query: 180 VLREAY--FQPQRNLADPLFMYVDHCFG-------IKGQGTVCTGTLLQGKVQ 223 + E +R L D + H G +KG+GTV + G+++ Sbjct: 484552 TVWELVMGLDDERRL-DAVVGSETHAEGLVLESVALKGRGTVLRVLIKNGELE 484707 >PHYCAscaffold_102 Length = 120866 Score = 60.5 bits (145), Expect = 6e-09 Identities = 48/150 (32%), Positives = 73/150 (48%), Gaps = 23/150 (15%) Frame = -1 Query: 4 NFNIGLLGHVDSGKTTLAKALSSISSTA-----------AFDKNPQSVERGITLDLG--- 49 + N+ L+GHVD+GK+TL+ L + A +N S +D G Sbjct: 19991 HLNVVLIGHVDAGKSTLSGNLLYLMDQVDKRTIERYEREAKQRNRDSWFLAYIMDTGDEE 19812 Query: 50 -FSGLLVDAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKG----- 103 G+ V+ + E +FT +D PGH + + +I GA D+ LLV+ A+KG Sbjct: 19811 RAKGITVEVGRAHFETETRRFTILDAPGHKNYVPNMIQGASQADIGLLVISARKGEFETG 19632 Query: 104 --KQTQTAECLIIGELLQ-KKLIVVINKID 130 + QT E ++ + L KLIVVINK+D Sbjct: 19631 FERGGQTREHAMLAKTLGINKLIVVINKMD 19542 >PHYCAscaffold_79 Length = 222129 Score = 57.8 bits (138), Expect = 4e-08 Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 9/131 (6%) Frame = -3 Query: 9 LLGHVDSGKTTLAKALSSISSTAAFDKNPQSVERGITLDLGFSGLLVDA----PAHLPQG 64 ++GHVD+GKT K L +I T D GIT +G + VDA A L + Sbjct: 60238 IMGHVDTGKT---KLLDNIRKTKVQDAEAG----GITQQIGATFFPVDAIKQKTARLAET 60080 Query: 65 EQLQFTF-----VDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGELLQ 119 +L++ +D PGH S G+ + D+ +LVVD G + QT E L + + Sbjct: 60079 MKLEYRLPGLLVIDTPGHESFTNLRNRGSSLCDIAILVVDIMHGLEPQTLESLRLLRQKK 59900 Query: 120 KKLIVVINKID 130 +V +NKID Sbjct: 59899 APFVVALNKID 59867 >PHYCAscaffold_27 Length = 705730 Score = 54.7 bits (130), Expect = 3e-07 Identities = 62/237 (26%), Positives = 96/237 (40%), Gaps = 18/237 (7%) Frame = -1 Query: 6 NIGLLGHVDSGKTTLAKAL-----SSISSTAAFDKNPQSVERGITLDLGFSGLLVDAPAH 60 N+ ++ HVD GKTTL L + +S D ERGIT+ + V+ H Sbjct: 491317 NVAIVAHVDHGKTTLVDQLLKHGGTQLSEERVMDSIDLERERGITIMSKCTR--VEYNGH 491144 Query: 61 LPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGELLQK 120 + VD PGHA + ++D ++LVVDA +G +QT L Sbjct: 491143 V-------LNIVDTPGHADFGGEVERILSMVDGVVLVVDATEGPMSQTKFVLTKALHRGL 490985 Query: 121 KLIVVINKIDVYPENQRASKLEKLRLRLAKTLEATTFGGQVPICAVSALQG--THIAELR 178 K +VV+NK+D ++ +E + L+A + P+ SA QG H + Sbjct: 490984 KPLVVVNKVD-RDTSRLDGSVENELFDMFVALDADDDQLEFPVLYASAKQGWAVHDLDNA 490808 Query: 179 EVLREAYF-----------QPQRNLADPLFMYVDHCFGIKGQGTVCTGTLLQGKVQV 224 + R++ P+ N P M V G + TG + G V+V Sbjct: 490807 DETRDSMLPLLDEITRYVPSPEANADKPFAMAVTMIGHDPYVGRLATGRVHAGTVKV 490637 >PHYCAscaffold_12 Length = 1145657 Score = 53.1 bits (126), Expect = 1e-06 Identities = 89/397 (22%), Positives = 152/397 (38%), Gaps = 68/397 (17%) Frame = +2 Query: 4 NFNIGLLGHVDSGKTTLAKAL----------------------------SSISS---TAA 32 N + ++G +SGK+TL L SS+S A Sbjct: 419060 NLRVSMIGDFESGKSTLVGVLTRGCLDDGAGLARMQVCRHRHELENGCTSSVSEHTIAVA 419239 Query: 33 FDKNPQSVERGITLDLGFSGLLVDAPAHLPQGEQLQFTFVDCPGHASLIRTIIGG--AQI 90 D + + + T D G S + H P+ ++ T D GH +++ G Q Sbjct: 419240 ADGHFRCTDELATCDFGDSD--EEEERHKPKRQESFITLSDLAGHRKYLKSTASGLAGQF 419413 Query: 91 IDLMLLVVDAQKGKQTQTAECLIIGELLQKKLIVVINKIDVYPENQRASKLEKL------ 144 D +LVVDA +G + T E + I L + VVI K D+ +++ L ++ Sbjct: 419414 PDYAMLVVDAVRGVRDMTREHIKIATALGVAVFVVITKTDLATDDRMQRTLAEVTDLLQV 419593 Query: 145 ----RLRLAKTLEATTF--------GGQVPICAVSALQGTHIAELREVLREAYFQPQRNL 192 + + A TF VP+ VS++ G + L+ L A +P+R Sbjct: 419594 FCPCQQVVLSPQGAETFMDEHEDLSASMVPVFRVSSVSGDGLDVLQAYL--AVLEPKRVW 419767 Query: 193 A----DPLFMYVDHCFGIKGQGTVCTGTLLQGKVQVNNVIELPALGEQR----KVKSIQM 244 A P+ V + I+ GTV G + G V + L + V+SI++ Sbjct: 419768 AAKAKTPVEFQVSQAYDIQDTGTVVIGLVQAGTFCVGERLLLGPGADGHFCAVAVESIEV 419947 Query: 245 FRKNVTSASMGDRIGLCVTQFNAKLL----ERGIITQPGYLKPI----YAVCLQFKP-IR 295 K S S G+ + ++ A L +G + ++P + LQF P R Sbjct: 419948 QHKAAQSLSAGETGAVLISFLTATQLPHRIRKGTMLVHPSVRPTATRQFDAELQFLPDAR 420127 Query: 296 YYKEVIKSMRKMHISVGHNTVMANVTLFRDTDGTTST 332 ++E +++ I G MA + + D ++T Sbjct: 420128 TFRENFQAV----IHTGQVRQMAKIVRLGNADTVSTT 420226 Score = 28.5 bits (62), Expect(2) = 0.020 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = +1 Query: 6 NIGLLGHVDSGKTTLAKALSS 26 NI +L HVD GKTTL+ +L S Sbjct: 454477 NICILAHVDHGKTTLSDSLVS 454539 Score = 28.5 bits (62), Expect(2) = 0.020 Identities = 29/122 (23%), Positives = 50/122 (40%), Gaps = 2/122 (1%) Frame = +3 Query: 34 DKNPQSVERGITLDLGFSGLLVDAPAHLPQGEQLQF--TFVDCPGHASLIRTIIGGAQII 91 D + RGIT+ L+ + + + VD PGH + ++ Sbjct: 454650 DNTEEEQVRGITMKSSAISLVYQPEPVADKEPEAPYLINLVDSPGHVDFSFDVSTAVRLC 454829 Query: 92 DLMLLVVDAQKGKQTQTAECLIIGELLQKKLIVVINKIDVYPENQRASKLEKLRLRLAKT 151 D L+++DA +G QT + + +VINK+D + S +E + RL + Sbjct: 454830 DGALVLIDAVEGVCAQTHAVIRQAWKEGIRPCLVINKMDRLIFELQFSPMEAYQ-RLNRI 455006 Query: 152 LE 153 LE Sbjct: 455007 LE 455012 >PHYCAscaffold_54 Length = 427428 Score = 51.6 bits (122), Expect = 3e-06 Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 32/155 (20%) Frame = -1 Query: 9 LLGHVDSGKTTLAKAL------------------------SSISSTAAFDKNPQSVERGI 44 ++GHVD+GK+T+ L SS + D + + RG+ Sbjct: 133269 VIGHVDAGKSTITGHLLYKLGYVSKRLMHKYEKESREAGKSSFAYAWVMDADEEERSRGV 133090 Query: 45 TLDLGFSGLLVDAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGK 104 T+D+G S D T +D PGH I +I GA D+ +LVV A G+ Sbjct: 133089 TMDVGTSHFETDTK---------HVTLLDAPGHRDFIPKMIAGAAQADVAVLVVPAVTGE 132937 Query: 105 -------QTQTAE-CLIIGELLQKKLIVVINKIDV 131 QT E L++ L +++V +NK+D+ Sbjct: 132936 FEAAFENSGQTKEHTLLVRSLGVSQMVVAVNKMDM 132832 >PHYCAscaffold_60 Length = 366873 Score = 51.2 bits (121), Expect = 4e-06 Identities = 38/136 (27%), Positives = 55/136 (40%), Gaps = 11/136 (8%) Frame = +3 Query: 6 NIGLLGHVDSGKTTLAKALSSISST-----------AAFDKNPQSVERGITLDLGFSGLL 54 NIG+L H+D+GKTT + + S A D PQ ERGIT+ Sbjct: 121944 NIGILAHIDAGKTTTTERMLFYSGAIRRMGEVHDGDATMDFMPQERERGITIGA------ 122105 Query: 55 VDAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLII 114 A P E +D PGH + +++D + V+D G + QT Sbjct: 122106 --AAISFPWREH-HINLIDTPGHVDFTIEVERAVRVLDGAVAVLDGVAGVEAQTETVWEQ 122276 Query: 115 GELLQKKLIVVINKID 130 + IV +NK+D Sbjct: 122277 ADRYNVPRIVFVNKLD 122324 >PHYCAscaffold_11 Length = 1076090 Score = 42.0 bits (97), Expect = 0.002 Identities = 44/183 (24%), Positives = 76/183 (41%), Gaps = 17/183 (9%) Frame = +2 Query: 6 NIGLLGHVDSGKTTLAKALSSISST--------------AAFDKNPQSVERGITLDLGFS 51 NIG+ H+DSGKTTL + + + A D E+GIT Sbjct: 83159 NIGISAHIDSGKTTLTERILFYTGRINAIHDVRGKDGVGAKMDSMELEREKGIT------ 83320 Query: 52 GLLVDAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAEC 111 + + A ++ +D PGH + +++D +LV+ G Q+Q+ Sbjct: 83321 ---IQSAATYCSWKESNINIIDTPGHVDFTIEVERALRVLDGGVLVLCGVSGVQSQS--- 83482 Query: 112 LIIGELLQK---KLIVVINKIDVYPENQRASKLEKLRLRLAKTLEATTFGGQVPICAVSA 168 L + + +++ I INK+D + + K+ L L+ + QVPI A + Sbjct: 83483 LTVDKQMKRYGVPRIAFINKLD-----RMGANPWKVIGDLRNQLKLNAWALQVPIGAEND 83647 Query: 169 LQG 171 L+G Sbjct: 83648 LEG 83656 >PHYCAscaffold_105 Length = 102149 Score = 37.0 bits (84), Expect = 0.071 Identities = 41/160 (25%), Positives = 67/160 (41%), Gaps = 35/160 (21%) Frame = -2 Query: 6 NIGLLGHVDSGKTTLAKALSS----ISSTAA-----FDKNPQSVERGITL---------- 46 N+ ++ HVD GK+TL +L S IS+ A D ER IT+ Sbjct: 16003 NMSVIAHVDHGKSTLTDSLVSKAGIISAKHAGEARFTDTRADEQERCITIKSTGISMFFE 15824 Query: 47 ---DLG----FSGLLVDAPAHLPQGEQLQFT-------FVDCPGHASLIRTIIGGAQIID 92 D G + + + G+++ +D PGH + ++ D Sbjct: 15823 YDMDAGEAATAAAIAHETAEEAAAGQEVVINKNSYLINLIDSPGHVDFSSEVTAALRVTD 15644 Query: 93 LMLLVVDAQKG--KQTQTAECLIIGELLQKKLIVVINKID 130 L+VVD +G QT+T IGE + K ++++NK+D Sbjct: 15643 GALVVVDCIEGVCVQTETVLRQSIGE--RVKPVLMVNKVD 15530 >PHYCAscaffold_55 Length = 463907 Score = 32.0 bits (71), Expect = 2.3 Identities = 15/50 (30%), Positives = 23/50 (46%) Frame = -3 Query: 63 QGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECL 112 +G+ +DCPGH + Q+ D +LVVDA +G E + Sbjct: 354195 RGKHYLLNVLDCPGHVNFSDETTAALQVADGAVLVVDAIEGVMMNVREII 354046 >PHYCAscaffold_122 Length = 61064 Score = 30.4 bits (67), Expect = 6.6 Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 2/68 (2%) Frame = +2 Query: 47 DLGFSGLLV-DAPAHLPQGEQLQFTFVDC-PGHASLIRTIIGGAQIIDLMLLVVDAQKGK 104 DLG G++V A LP L F + C G A IRT +G +++D+ AQ+ + Sbjct: 9548 DLGLFGVIVVTAERPLPLSNGLGFVRISCCGGGAEFIRTAVGTVELLDV------AQQCR 9709 Query: 105 QTQTAECL 112 + CL Sbjct: 9710 KFVNGNCL 9733 Database: P.capsici/genome.fa Posted date: Nov 21, 2011 7:46 PM Number of letters in database: 64,023,748 Number of sequences in database: 917 Lambda K H 0.320 0.136 0.388 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 32,065,044 Number of Sequences: 917 Number of extensions: 465111 Number of successful extensions: 2058 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 67 Number of HSP's successfully gapped in prelim test: 38 Number of HSP's that attempted gapping in prelim test: 1588 Number of HSP's gapped (non-prelim): 907 length of query: 511 length of database: 21,341,249 effective HSP length: 109 effective length of query: 402 effective length of database: 21,241,296 effective search space: 8539000992 effective search space used: 8539000992 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 66 (30.0 bits)