TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SPP00000092_1.0 # Protein # Eukaryotic elongation factor (eEFSec) # Drosophila melanogaster # Complete (511 letters) Database: L.donovani_BPK282A1/genome.fa 36 sequences; 32,444,998 total letters Searching....................................done Score E Sequences producing significant alignments: (bits) Value contig_34 277 2e-74 contig_18 101 1e-21 contig_17 80 3e-15 contig_09 76 5e-14 contig_22 67 3e-11 contig_25 61 2e-09 contig_24 59 9e-09 contig_11 57 3e-08 contig_33 54 4e-07 contig_28 51 2e-06 contig_36 45 1e-04 contig_32 45 1e-04 contig_35 42 0.001 contig_27 29 9.9 >contig_34 Length = 1750858 Score = 277 bits (708), Expect = 2e-74 Identities = 184/465 (39%), Positives = 249/465 (53%), Gaps = 71/465 (15%) Frame = +1 Query: 3 INFNIGLLGHVDSGKTTLAKALSSISSTAAFDKNPQSVERGITLDLGFSGLLV------- 55 +N NIGLLGHVDSGKT LAKALSS +STAAFDK+PQS RGITLDLGFS V Sbjct: 1179466 LNVNIGLLGHVDSGKTALAKALSSTASTAAFDKSPQSQSRGITLDLGFSACEVSVEDGNA 1179645 Query: 56 DAPAHLPQGE--QLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLI 113 DA L + + ++Q T VDCPGHASLIRT++GGAQIID M+LV+DA KG Q QTAECLI Sbjct: 1179646 DATRVLREADLTKVQCTLVDCPGHASLIRTVVGGAQIIDAMVLVIDATKGMQVQTAECLI 1179825 Query: 114 IGELLQKKLIVVINKIDVYPENQRASK---LEKLRLRLAKTLEATTFGGQVPICAVSA-- 168 +GE+L K L+VV+NK+D A+K L L+ +L + T + V I V+A Sbjct: 1179826 LGEVLAKPLVVVLNKMDAIQGASPAAKEAALAALKRKLQQVFRRTRW-PTVAIVEVAAAP 1180002 Query: 169 --------------------LQGTHIAELREVLREAYFQPQRNLADPLFMYVDHCFGIKG 208 L+ +A L+ +P + +M VDHCF ++G Sbjct: 1180003 REVAGGIGHPLNTEAVLPQVLRAVDLAALKSAKESEAERPAQ-----FYMLVDHCFAVRG 1180167 Query: 209 QGTVCTGTLLQGKVQVNNVIELPALGEQRKVKSIQMFRKNVTSASMGDRIGLCVTQFNAK 268 QGTV TGT++ G V+V + + +P L RKVK +Q+F K V A GDR+GLCV QF+ Sbjct: 1180168 QGTVFTGTVVAGVVRVGDTVLVPELQTTRKVKGLQVFHKPVEMAQSGDRVGLCVAQFDPT 1180347 Query: 269 LLERGIITQPG----YLKPIYAVCLQFKPIRYYKEVIKSMRKMHISVGHNTVMANVTLFR 324 +ERG++ L + + +RY+ + K HI++GH TVM + F Sbjct: 1180348 WMERGVLCSAASSGRALVSSSQLIARVHRVRYHPLPCDTHTKFHITIGHATVMGTMRYFA 1180527 Query: 325 ---------DTDGTTSTFQLDKEYEYMED------------------------VQPAEVQ 351 D GT ++F E Y+E+ V PAE Sbjct: 1180528 RPPRANESLDVPGTGASFDPSIESTYVEELDDGVVASYTSTDTTASVPGRPLPVAPAEQD 1180707 Query: 352 HNDVIYALLQFESPVLSPPHSTLIASKLDMDVHSTSCRLAFWGRI 396 + YA+L E PVL+ P ++IA +LD++ CR+A G + Sbjct: 1180708 Y----YAVLLLERPVLAAPGVSMIAMRLDVE-RENFCRIALAGTV 1180827 Score = 43.9 bits (102), Expect = 3e-04 Identities = 39/151 (25%), Positives = 65/151 (43%), Gaps = 8/151 (5%) Frame = +1 Query: 6 NIGLLGHVDSGKTTLAKALSSIS-------STAAF-DKNPQSVERGITLDLGFSGLLVDA 57 N+ ++ HVD GKTTL+ A+ S +T F D+ ERGIT+ +L+ Sbjct: 239533 NVSVVAHVDHGKTTLSDAMLRFSNLLPADGATGTFTDRLKVEKERGITIKAQTCSVLLTV 239712 Query: 58 PAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGEL 117 G Q +D PGH + + L+VD ++G + QT Sbjct: 239713 ---RETGTQYLVNLIDTPGHVDFQYEVSRSLCASEGAALLVDVRQGVEAQTMAQFYAALE 239883 Query: 118 LQKKLIVVINKIDVYPENQRASKLEKLRLRL 148 ++ V+ K+D + +++EK L+L Sbjct: 239884 QNLTILPVLTKMDSVMSD---AEVEKTLLQL 239967 >contig_18 Length = 735640 Score = 101 bits (252), Expect = 1e-21 Identities = 84/300 (28%), Positives = 141/300 (47%), Gaps = 31/300 (10%) Frame = +1 Query: 7 IGLLGHVDSGKTTLAKALSSISSTA---------AFDKNPQSVERGITLDLGFSGLLVDA 57 IG +GHVD GKTTL A++++ + A DK+P+ R IT++ Sbjct: 309100 IGTIGHVDHGKTTLTSAITTVLAKRGQAQALDYFAIDKSPEEKSRKITINA--------- 309252 Query: 58 PAHLP-QGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLII-G 115 H+ + E+ + +DCPGH ++ +I GA +D ++VV A G QT E L+I Sbjct: 309253 -THVEYESEKRHYGHIDCPGHMDFVKNMITGAAQMDGGIIVVAATDGVMPQTREHLLICS 309429 Query: 116 ELLQKKLIVVINKIDVYPENQRASKLEKLRLRLAKTLEATTF-GGQVPICAVSALQGT-- 172 ++ L+ INK+D+ E+ + + + L + LE F + PI SAL+ Sbjct: 309430 QIGLPALVGFINKVDMTDED----TCDLVDMELREQLEKYKFPAEETPIVRGSALKAVEG 309597 Query: 173 ------HIAELREVLREAYFQPQRNLADPLFMYVDHCF--GIKGQGTVCTGTLLQGKVQV 224 +I EL E P RN P M ++H + G + V TG + QG +++ Sbjct: 309598 DAKYEENILELVRKCDEWIPDPPRNTDKPFLMAIEHVYEIGKDKKSVVVTGRVDQGILKL 309777 Query: 225 NNVIELPALGEQR---KVKSIQMFRKNVTSASMGDRIGLCV------TQFNAKLLERGII 275 N EL ++ +V I+M+ K ++ GD +G+ + T + +ERG++ Sbjct: 309778 NTDAELAGFSSKKSTVRVTGIEMYHKTLSECMPGDSVGVSIVGTGDTTSLSKGNVERGMV 309957 >contig_17 Length = 671483 Score = 80.5 bits (197), Expect = 3e-15 Identities = 74/315 (23%), Positives = 128/315 (40%), Gaps = 44/315 (13%) Frame = -2 Query: 3 INFNIGLLGHVDSGKTTLAKAL------------------------SSISSTAAFDKNPQ 38 ++ N+ ++GHVD+GK+T L +S DK Sbjct: 69457 VHMNLVVVGHVDAGKSTATGHLIYKCGGIDKRTIEKFEKEAAEIGKASFKYAWVLDKLKA 69278 Query: 39 SVERGITLDLGFSGLLVDAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVV 98 ERGIT+D+ + + FT +D PGH I+ +I G D +L++ Sbjct: 69277 ERERGITIDIALWKF---------ESPKSVFTIIDAPGHRDFIKNMITGTSQADAAILMI 69125 Query: 99 DAQKG-------KQTQTAE-CLIIGELLQKKLIVVINKIDVYPENQRASKLEKLRLRLAK 150 D+ G K QT E L+ L K+++V NK+D S+ +++ + Sbjct: 69124 DSTHGGFEAGISKDGQTREHALLAFTLGVKQMVVCCNKMDDKTVTYAQSRYDEISKEVGA 68945 Query: 151 TLEATTFGGQ-VPICAVSALQGTHIAELREVLR-----------EAYFQPQRNLADPLFM 198 L+ + + V +S QG ++ E + + + P R + PL + Sbjct: 68944 YLKRVGYNPEKVRFIPISGWQGDNMIERSDNMPWYKGPTLLDALDMLEPPVRPVDKPLRL 68765 Query: 199 YVDHCFGIKGQGTVCTGTLLQGKVQVNNVIELPALGEQRKVKSIQMFRKNVTSASMGDRI 258 + + I G GTV G + G ++ +V+ +VKSI+M + + A GD + Sbjct: 68764 PLQDVYKIGGIGTVPVGRVETGIMKPGDVVTFAPANVTTEVKSIEMHHEQLAEAQPGDNV 68585 Query: 259 GLCVTQFNAKLLERG 273 G V + K + RG Sbjct: 68584 GFNVKNVSVKDIRRG 68540 >contig_09 Length = 588727 Score = 76.3 bits (186), Expect = 5e-14 Identities = 71/231 (30%), Positives = 105/231 (45%), Gaps = 26/231 (11%) Frame = -2 Query: 6 NIGLLGHVDSGKTTLAKALSSISSTAAFDKNPQSVERGITLDLGFSGLLV---------- 55 N+G +GHV GK+T+ KALS + + K + IT+ LG++ V Sbjct: 448452 NVGTIGHVAHGKSTVVKALSGVKT----QKFHREAVMNITIHLGYANAKVYQCETCPRPT 448285 Query: 56 ---DAPAHLPQ-------GEQL----QFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQ 101 P+ P GE + F+FVDCPGH L+ T++ GA I+D LL++ A Sbjct: 448284 CYQTYPSSQPDSTPCPNCGETMTLKRHFSFVDCPGHDVLMATMLNGAAIMDAALLLIAAN 448105 Query: 102 KG-KQTQTAECLIIGELLQ-KKLIVVINKIDVYPENQRASKLEKLRLRLAKTLEATTFGG 159 + Q QT E L E+++ + L+V+ NKID+ E + + +R L Sbjct: 448104 ESFPQPQTLEHLKAVEIMKLRHLVVLQNKIDLVGEVKAHDQYRHVRAYL------DNIAL 447943 Query: 160 QVPICAVSALQGTHIAELREVLREAYFQPQRNLADPLFMYVDHCFGIKGQG 210 VPI +SA ++ L E L P R L P+ M V F I G Sbjct: 447942 NVPIVPISAQLKRNVDYLLEYLLHIP-MPVRQLKAPVRMTVVRSFDINKPG 447793 Score = 63.9 bits (154), Expect = 3e-10 Identities = 61/197 (30%), Positives = 95/197 (48%), Gaps = 14/197 (7%) Frame = -2 Query: 69 FTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKG-KQTQTAECLIIGELL-QKKLIVVI 126 F+FVDCPGH L+ T++ GA I+D LL++ A + Q QT E L E++ LIV+ Sbjct: 451509 FSFVDCPGHDVLMATMLNGAAIMDAALLLIAANESFPQPQTLEHLAAAEMIGVSSLIVLQ 451330 Query: 127 NKIDVYPENQRASKLEKLRLRLAKTLEATTFGGQVPICAVSALQGTHIAELREVLREAYF 186 NK+D+ + + A++ + LA T + P+ + A Q +I+ L + L Sbjct: 451329 NKVDLVSKERAAAQYSIIHHYLA----TKTAYAKAPVIPICAQQHVNISFLLDYLVHIPL 451162 Query: 187 QPQRNLADPLFMYVDHCF----------GIKG-QGTVCTGTLLQGKVQVNNVIE-LPALG 234 P+R L +M V F G K +G V GT+ G + V + IE +P L Sbjct: 451161 -PRRQLHHAQYMNVLRSFDVSLPGPAGDGAKALKGGVVGGTVAAGVLCVGDEIEIIPGLL 450985 Query: 235 EQRKVKSIQMFRKNVTS 251 R+ + R +V S Sbjct: 450984 VLRRRDGVLPRRADVLS 450934 >contig_22 Length = 704761 Score = 67.4 bits (163), Expect = 3e-11 Identities = 65/227 (28%), Positives = 93/227 (40%), Gaps = 16/227 (7%) Frame = -1 Query: 7 IGLLGHVDSGKTTLAKALSSISSTAAFDKNPQSVERGITLDLGFSGLLVDAPAHLPQGEQ 66 + ++GHVD GKTTL L + A GIT ++G + P G Sbjct: 481333 VSIMGHVDHGKTTLLDHLRHTNVAAG-------EAGGITQNVGAFQVKT------PDGHI 481193 Query: 67 LQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGELLQKKLIVVI 126 + TF+D PGHA+ GA DL++L+V A G Q QT E + + + ++V + Sbjct: 481192 I--TFIDTPGHAAFTAMREVGATTNDLIVLIVSAVDGVQPQTREVIELAQRKGTPMVVAV 481019 Query: 127 NKIDVYPENQRASKLEKLRLRLAKTLEATTFGGQVPICAVSALQGTHIAELREVLR---- 182 KID P+ ++L +A +E GG V + + A G I EL E L Sbjct: 481018 TKIDRQPDCDYVK--DQL---VANGVELEEKGGDVQLVKICAKDGRGIPELLEALHLQAE 480854 Query: 183 ------------EAYFQPQRNLADPLFMYVDHCFGIKGQGTVCTGTL 217 E Y RNL V C +K TGT+ Sbjct: 480853 LCEVATPTPSRAELYVLESRNLGVSEVAAVVRCGTVKPGQVFVTGTV 480713 Score = 32.0 bits (71), Expect = 1.2 Identities = 33/134 (24%), Positives = 55/134 (41%), Gaps = 14/134 (10%) Frame = +3 Query: 64 GEQLQFTFVDCPGHA-------------SLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAE 110 G LQ TFVD PG+ L G + ++ +L +D ++G + Sbjct: 295476 GGGLQLTFVDLPGYGIEGMSDKWRDAAIELTDAYFGVRRSVNTVLYCMDCERGLTKTDIK 295655 Query: 111 CLIIGELLQKKLIVVINKIDVYPENQRASKLEKLRLRLAKTLEATTFGGQVP-ICAVSAL 169 L E + +V+ K D P ++ S + ++ + K + P I VSA Sbjct: 295656 YLEWIENVHGACFMVLTKCDSVPHSRVCSVMRQVYALITK--HRHKYRKVFPFIIPVSAK 295829 Query: 170 QGTHIAELREVLRE 183 GT+I LR ++ E Sbjct: 295830 DGTNIELLRGLITE 295871 >contig_25 Length = 897883 Score = 61.2 bits (147), Expect = 2e-09 Identities = 42/131 (32%), Positives = 65/131 (49%), Gaps = 6/131 (4%) Frame = -1 Query: 6 NIGLLGHVDSGKTTLAKALSSISSTAA------FDKNPQSVERGITLDLGFSGLLVDAPA 59 NI ++ HVD GKTTL ++ S S T A D Q ERGIT+ + +++D Sbjct: 36256 NIAVIAHVDHGKTTLVDSMLSQSGTVANAHNRVMDSKDQERERGITILAKNTAIILD--- 36086 Query: 60 HLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGELLQ 119 + + VD PGH + Q+++ ++L+VDA++G + T L L Sbjct: 36085 ----NGKRRINIVDTPGHLDFSGEVERALQMVEGIILLVDAKEGVRPGTRYVLRKALSLH 35918 Query: 120 KKLIVVINKID 130 + IV +NKID Sbjct: 35917 LRPIVCLNKID 35885 Score = 48.1 bits (113), Expect = 2e-05 Identities = 42/157 (26%), Positives = 65/157 (41%), Gaps = 9/157 (5%) Frame = -1 Query: 6 NIGLLGHVDSGKTTLAKALSSISSTAA---------FDKNPQSVERGITLDLGFSGLLVD 56 N ++ HVD GKTTL+ L + + + D P ER IT+ L Sbjct: 785362 NFCMVAHVDHGKTTLSDYLVASNGILSPQLAGEVRLLDSRPDEQERCITMKASSIAL--- 785192 Query: 57 APAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGE 116 H G+ VD PGH + ++ D +++VD G QT+ L Sbjct: 785191 --HHAYAGKSHVLNLVDSPGHIDFSCEVSTAMRLCDGAVVIVDVVDGVTQQTSSILRHTY 785018 Query: 117 LLQKKLIVVINKIDVYPENQRASKLEKLRLRLAKTLE 153 + +V+NKID+ Q+ + E+ LRL +E Sbjct: 785017 QEGLSMCLVLNKIDLLVTTQQYT-AEEAYLRLRSIIE 784910 >contig_24 Length = 877124 Score = 58.9 bits (141), Expect = 9e-09 Identities = 52/200 (26%), Positives = 85/200 (42%), Gaps = 13/200 (6%) Frame = +3 Query: 9 LLGHVDSGKTTLAKALSSISSTAAFDKNPQSVERGITLDLGFSGLLVDAPAHLPQGEQLQ 68 ++GHV+ GKT L AL A + R T+ P + Sbjct: 493590 VMGHVNHGKTALLDALQGSRIGAEEPHHITQSVRAFTIPR-------------PGADNDL 493730 Query: 69 FTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGELLQKKLIVVINK 128 FTF+D PGH + T + D++ LV+ +G ++QT E + + + K +IVV+NK Sbjct: 493731 FTFIDTPGHRIFVETRFHVQLMADVIALVISVAEGIESQTHETIKVALNVDKPVIVVLNK 493910 Query: 129 IDVYPENQRASK-------------LEKLRLRLAKTLEATTFGGQVPICAVSALQGTHIA 175 +D+ + A K L+ L+ K +EA T C+ G+ + Sbjct: 493911 LDLLSDALTAKKAVRRILAELYSIGLDVHLLQREKDVEALTTKASTVCCSSC---GSSLT 494081 Query: 176 ELREVLREAYFQPQRNLADP 195 +LR + YF P + + DP Sbjct: 494082 DLRP--QAEYFAPMKTV-DP 494132 >contig_11 Length = 580223 Score = 57.4 bits (137), Expect = 3e-08 Identities = 81/409 (19%), Positives = 168/409 (41%), Gaps = 41/409 (10%) Frame = +2 Query: 4 NFNIGLLGHVDSGKTTLAKAL---SSISSTAAFDK--------NPQSVERGITLDLG--- 49 +FNI GHVD+GK+T++ L + +K + + E +D+ Sbjct: 473603 HFNIVFCGHVDAGKSTISGHLLMEKGLVDQREMEKLRREAEINHREGWEYAYVMDVSEEE 473782 Query: 50 -FSGLLVDAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKG----- 103 G+ + A + E+ + T +D PGH + + ++IGGA D+ +LV+ ++ G Sbjct: 473783 RSKGITRETGAAYFETEKRRVTVLDAPGHKAFVPSMIGGATQADICVLVISSRTGEFETG 473962 Query: 104 --KQTQTAE-CLIIGELLQKKLIVVINKID--VYPENQRASKLEKLRLRL---------A 149 K QT E +++ K++I VINK+D + + + +++L+ L A Sbjct: 473963 FEKGGQTREHAMLVRTCGVKQMICVINKMDEMKWSKERYNEIVDRLKPFLRQNGYDEERA 474142 Query: 150 KTLEATTFGGQVPICAVSALQGTHI-----AELREVLREAYFQPQRNLADPLFMYVDHCF 204 K L G + ++ +H + EV+ + P+ D +F + Sbjct: 474143 KNLIFMPVAGLTGENLIKHVEPSHCDWYKGKTMMEVIDDLKL-PESKTEDDVFC-IPLVG 474316 Query: 205 GIKGQG-TVCTGTLLQGKVQVNNVIELPALGEQRKVKSIQMFRKNVTSASMGDRIGLCVT 263 K G T G + G + V I++ + V+ I + GD + L V Sbjct: 474317 AYKDDGKTHIYGKVESGSIAVGERIQVLPTKAEALVEGISIESTEFEKCYPGDNVHLHVR 474496 Query: 264 QFNAKLLERGIITQPGYLKPIYAVCLQFKPIRYYKEVIKSMRKMHISVGHNTVMANVTLF 323 + + G + ++ + + +++ + + +I + VM ++ Sbjct: 474497 GIDENDIHGGYVAT--------SIPTSLRAVEFFQARVVILEVKNIISAGSRVMLHIHSA 474652 Query: 324 RDTDGTTSTF-QLDKEYEYMEDVQPAEVQHNDVIYALLQFESPVLSPPH 371 ++ ++D++ + + PA V+ DV+ A ++ + PV+ PH Sbjct: 474653 QEEASFHKLLAKIDRKTNEVVEKNPACVKAGDVVIARIELDRPVVLEPH 474799 >contig_33 Length = 1453978 Score = 53.5 bits (127), Expect = 4e-07 Identities = 45/132 (34%), Positives = 63/132 (47%), Gaps = 10/132 (7%) Frame = +3 Query: 9 LLGHVDSGKTTLAKALSSISSTAAFDKNPQSVERG-ITLDLGFSGL----LVDAPAHLPQ 63 +LGHVD+GKT+L L I ST N Q E G IT +G + LV A A L + Sbjct: 1126773 VLGHVDTGKTSL---LDRIRST-----NVQGGEAGGITQQIGATFFPRESLVSATAELIK 1126928 Query: 64 GEQLQFTF-----VDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGELL 118 + +D PGH S G+ + D+ +LVVD G + QT E + + Sbjct: 1126929 KHKCNLNVPGLLVIDTPGHESFTNLRSRGSSLCDIAILVVDIMHGLEQQTRESIRLLREK 1127108 Query: 119 QKKLIVVINKID 130 + IV +NK+D Sbjct: 1127109 RCPFIVALNKVD 1127144 >contig_28 Length = 1171725 Score = 51.2 bits (121), Expect = 2e-06 Identities = 43/171 (25%), Positives = 71/171 (41%), Gaps = 13/171 (7%) Frame = -2 Query: 6 NIGLLGHVDSGKTTLAKALSSISSTAAFDKNPQSVERGITL-----DLGFSGLLVDAPAH 60 NIG+ H+D+GKTT + + A K V+RG T + G+ + + A Sbjct: 781118 NIGIAAHIDAGKTTTTERMLFY---AGVTKRVGDVDRGTTTTDFMKEEADRGITIQSAAV 780948 Query: 61 LPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGELLQK 120 + +D PGH + +I+D ++ + DA G Q Q+ L Sbjct: 780947 SLRWRDHGINLIDTPGHVDFTVEVERTMRIVDGVVALFDASAGVQAQSYTVLQQSRRFNA 780768 Query: 121 KLIVVINKIDVYPENQRAS--------KLEKLRLRLAKTLEATTFGGQVPI 163 LI +NK+D Y + S ++E L L++ E +F G V + Sbjct: 780767 PLIAFLNKMDKYNADFAMSVNSIRTKLQVEPLLLQIPLHAEDGSFAGVVDV 780615 >contig_36 Length = 2713248 Score = 45.4 bits (106), Expect = 1e-04 Identities = 33/139 (23%), Positives = 53/139 (38%), Gaps = 14/139 (10%) Frame = -1 Query: 6 NIGLLGHVDSGKTTLAKAL---------SSISSTAAFDKNPQSVERGITLDLGFSGLLVD 56 N+ ++ HVD GK+TL+ +L D + RGIT+ + Sbjct: 60993 NMSVIAHVDHGKSTLSDSLVGAAGIIKMEEAGDKRIMDTRADEIARGITIKSTAISMHYH 60814 Query: 57 APAHL-----PQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAEC 111 P + +D PGH + ++ D L+VVD +G QT Sbjct: 60813 VPKEMIGDLDDDKRDFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVEGVCVQTETV 60634 Query: 112 LIIGELLQKKLIVVINKID 130 L + + +V INK+D Sbjct: 60633 LRQALTERIRPVVFINKVD 60577 Score = 44.7 bits (104), Expect = 2e-04 Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 9/150 (6%) Frame = +3 Query: 6 NIGLLGHVDSGKTTLAKALSSISS-TAAFDKNPQSVERGITLDL----GFSGLLVDAPAH 60 NIG+ H+DSGKTTL++ + S + E G T+D G+ + + A Sbjct: 163047 NIGISAHIDSGKTTLSERILFYSGRIGKIHEVKGGTEVGATMDSMELEKERGITIRSAAT 163226 Query: 61 LPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGELLQK 120 + + +D PGH + +++D +L++ A G Q+QT L + +++ Sbjct: 163227 QCRWKNSTINIIDTPGHVDFTIEVERALRVLDGAILLMCAVGGVQSQT---LTVDRQMKR 163397 Query: 121 ---KLIVVINKIDVYPEN-QRASKLEKLRL 146 I INK+D N QRA K + RL Sbjct: 163398 YGVPRICFINKLDRDNANPQRAVKQAQERL 163487 Score = 28.9 bits (63), Expect = 9.9 Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 3/86 (3%) Frame = -2 Query: 364 SPVLSPPHSTLIASK---LDMDVHSTSCRLAFWGRIAWQTHSSKYFQEELPKLRIFKRKQ 420 SP S P + SK + + H+ R+A R++ H S+ Q LPKLR+F R Sbjct: 367514 SPYSSQPLHDNL*SKEKQTNTETHALDLRIAL--RLSPLPHPSRPHQRVLPKLRLF-RIP 367344 Query: 421 KVGSIQRVVNSSEVIVQNLFKDAKRD 446 K S+ V +SS N K+ +R+ Sbjct: 367343 KRSSLGTVAHSS-----NTRKERRRE 367281 >contig_32 Length = 1559911 Score = 45.1 bits (105), Expect = 1e-04 Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 3/128 (2%) Frame = -1 Query: 6 NIGLLGHVDSGKTTLAKALSSISSTAAFDKNPQSVERGITLDLGFSGLLVDAPAHLPQGE 65 N+ + G + GKT+L + L S + K V+R +TL + P Sbjct: 866251 NVVVAGSLHHGKTSLVELLLHERS---YHKRQDEVDREMTLKSHVLTTITGGALLQPTSR 866081 Query: 66 QLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECL---IIGELLQKKL 122 Q+ T +D PGH LI G ++ D +L VDA + + L I+ E Q + Sbjct: 866080 QI--TVIDTPGHPDLIGETAAGMRLADAVLFCVDAAESLSDHSERLLRHAIVNE--QLPV 865913 Query: 123 IVVINKID 130 ++VI K+D Sbjct: 865912 VLVITKVD 865889 >contig_35 Length = 2113966 Score = 41.6 bits (96), Expect = 0.001 Identities = 45/197 (22%), Positives = 78/197 (39%), Gaps = 29/197 (14%) Frame = +1 Query: 9 LLGHVDSGKTTLAKALSSISSTAAFDKNPQSVERGITLDLGFS----------------- 51 + GHVD+GK+T L + + Q VER D Sbjct: 1667821 IAGHVDAGKSTTLGHLLLLLGRVSI----QDVERNEKADRTHRKDSFKYAWLLDQCEEER 1667988 Query: 52 --GLLVDAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGK----- 104 G+ +D+ + + E + +D PGH + ++I A D LLVV A + Sbjct: 1667989 RRGVTIDSGSFCFETEHRRVHILDAPGHKDFVLSMISSATQADAALLVVTAATSEFETGL 1668168 Query: 105 -QTQTAECLIIGELLQKKLIVVINKID--VYPENQRASKLEKLRLRLAKTL--EATTFGG 159 + L++ L ++V +NK+D Y + + + +L+L L +T E G Sbjct: 1668169 HHGTKSHLLVLKTLGVGSIVVAVNKMDAVAYSQERYDYVVRELQLLLKQTRIPEEAIIG- 1668345 Query: 160 QVPICAVSALQGTHIAE 176 C +S + G +I + Sbjct: 1668346 ---FCPISGMAGVNITQ 1668387 >contig_27 Length = 1024085 Score = 28.9 bits (63), Expect = 9.9 Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 3/59 (5%) Frame = +1 Query: 371 HSTLIAS---KLDMDVHSTSCRLAFWGRIAWQTHSSKYFQEELPKLRIFKRKQKVGSIQ 426 HSTL + KL +D H T + F G H F E+ PK+ F R GS+Q Sbjct: 593206 HSTLYTTTQHKLSVDPHRTRWIMDFSG----DCHVRVRFHEKRPKMDSFTRGTAQGSVQ 593370 Database: L.donovani_BPK282A1/genome.fa Posted date: Nov 21, 2011 7:46 PM Number of letters in database: 32,444,998 Number of sequences in database: 36 Lambda K H 0.320 0.136 0.388 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 17,863,750 Number of Sequences: 36 Number of extensions: 278218 Number of successful extensions: 1203 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 1026 Number of HSP's gapped (non-prelim): 378 length of query: 511 length of database: 10,814,999 effective HSP length: 105 effective length of query: 406 effective length of database: 10,811,219 effective search space: 4389354914 effective search space used: 4389354914 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 63 (28.9 bits)