TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SPP00000092_1.0 # Protein # Eukaryotic elongation factor (eEFSec) # Drosophila melanogaster # Complete (511 letters) Database: D.fasciculatum/genome.fa 25 sequences; 31,019,208 total letters Searching.........................done Score E Sequences producing significant alignments: (bits) Value gi|328869808|gb|GL883018.1| Dictyostelium fasciculatum unplaced ... 143 2e-68 gi|328874319|gb|GL883008.1| Dictyostelium fasciculatum unplaced ... 116 5e-26 gi|328873752|gb|GL883009.1| Dictyostelium fasciculatum unplaced ... 84 2e-16 gi|328872098|gb|GL883010.1| Dictyostelium fasciculatum unplaced ... 63 6e-10 gi|328866594|gb|GL883026.1| Dictyostelium fasciculatum unplaced ... 61 2e-09 gi|328864870|gb|GL883029.1| Dictyostelium fasciculatum unplaced ... 48 2e-05 gi|328876102|gb|GL883006.1| Dictyostelium fasciculatum unplaced ... 44 3e-04 gi|328868227|gb|GL883021.1| Dictyostelium fasciculatum unplaced ... 42 0.001 gi|328871053|gb|GL883014.1| Dictyostelium fasciculatum unplaced ... 41 0.002 gi|328875389|gb|GL883007.1| Dictyostelium fasciculatum unplaced ... 40 0.004 gi|328871378|gb|GL883013.1| Dictyostelium fasciculatum unplaced ... 31 2.5 >gi|328869808|gb|GL883018.1| Dictyostelium fasciculatum unplaced genomic scaffold Scf_Dfasci-G-b-285a01.f1-5, whole genome shotgun sequence Length = 1327167 Score = 143 bits (360), Expect(3) = 2e-68 Identities = 76/120 (63%), Positives = 90/120 (75%), Gaps = 9/120 (7%) Frame = +2 Query: 3 INFNIGLLGHVDSGKTTLAKALSSISSTAAFDKNPQSVERGITLDLGFSGLLVDAPAH-- 60 +N N+G++GHVDSGKT+LAK LS+ STAA DK+P S ERGITLDLGFS VD +H Sbjct: 719495 LNINVGIMGHVDSGKTSLAKVLSTSLSTAALDKSPASQERGITLDLGFSSFNVDVASHPL 719674 Query: 61 LPQG-------EQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLI 113 L Q +++QFT VDCPGHASLIRTIIGG+QIID+M LV+D KG QTQTAE I Sbjct: 719675 LSQRSEIANHYDRVQFTLVDCPGHASLIRTIIGGSQIIDMMFLVIDINKGIQTQTAEVCI 719854 Score = 118 bits (295), Expect(3) = 2e-68 Identities = 66/202 (32%), Positives = 110/202 (54%), Gaps = 25/202 (12%) Frame = +1 Query: 147 RLAKTLEATTFGGQVPICAVSALQGT-----HIAELREVLREAYFQPQR-----NLADPL 196 +L K LE T F Q P+ +VSA G ++ ++ ++ QP + + D L Sbjct: 720112 KLRKVLEKTCFS-QSPMVSVSANPGVVSEEANVNNNQQQQQQQPLQPSQPIGLNQMIDEL 720288 Query: 197 FMYV---------------DHCFGIKGQGTVCTGTLLQGKVQVNNVIELPALGEQRKVKS 241 ++ DHCF IKGQG+V TGT+L+G +++N +++P L ++K+KS Sbjct: 720289 CKFIEIPKRDDQGTFLFEFDHCFQIKGQGSVLTGTVLKGSIEINQTVQIPQLNLEKKIKS 720468 Query: 242 IQMFRKNVTSASMGDRIGLCVTQFNAKLLERGIITQPGYLKPIYAVCLQFKPIRYYKEVI 301 +QMF K V GDR G+CVTQ ++KLLERG++ P + + + + +R+YK ++ Sbjct: 720469 MQMFHKPVKKVVQGDRAGICVTQLDSKLLERGLLCTPKTVPLLNGAIISIEKVRFYKNLV 720648 Query: 302 KSMRKMHISVGHNTVMANVTLF 323 K+ H + HN ++ + LF Sbjct: 720649 KTNSHFHGNYHHNILLLLLLLF 720714 Score = 92.4 bits (228), Expect = 7e-19 Identities = 62/192 (32%), Positives = 99/192 (51%), Gaps = 15/192 (7%) Frame = +3 Query: 309 ISVGHNTVMANVTLF------------RDTDGTTSTFQLDKEYEYMEDVQPAEVQHN-DV 355 +++GH T A VT F ++ G+ F EY +ME ++P +++ Sbjct: 720771 VTIGHTTTTAIVTFFGNKILDQSTPTTKEETGSIHQFNEKIEYSFMEYLEPTSLEYPVGS 720950 Query: 356 IYALLQFESPVLSPPHSTLIASKLDMDVHSTSCRLAFWGRIAWQTHSSKYFQEELPKLRI 415 +AL++F+ PVL P S +I SKLD+ + ++ CR+AF G + +S Q LRI Sbjct: 720951 QFALIKFDHPVLCPLESVIIGSKLDVALDTSGCRIAFHGSLLQGIDASNR-QILHDTLRI 721127 Query: 416 FKRKQKVGSIQRVVNSSEVIVQNLF-KDAKRDLYVGKNVELSTGEKGRIERTFGQTSKVA 474 FK K K G+++RV + +I +NLF K ++G V G G I+ +FG+T K+ Sbjct: 721128 FKTKVKEGAVERVHSEDTLIGKNLFSKQTDLSSFIGMKVVFENGTVGVIDSSFGKTGKIR 721307 Query: 475 I-TFQDALSPET 485 I L P+T Sbjct: 721308 ILILPGTLPPQT 721343 Score = 38.9 bits (89), Expect(3) = 2e-68 Identities = 15/32 (46%), Positives = 24/32 (75%) Frame = +3 Query: 111 CLIIGELLQKKLIVVINKIDVYPENQRASKLE 142 C++IGE+ KK I+++NKID P+ R SK++ Sbjct: 719907 CIVIGEITCKKGIIILNKIDQIPQESRQSKID 720002 >gi|328874319|gb|GL883008.1| Dictyostelium fasciculatum unplaced genomic scaffold Scf_Dfasci-G-o-80e12.f1-5, whole genome shotgun sequence Length = 2750715 Score = 116 bits (290), Expect = 5e-26 Identities = 94/305 (30%), Positives = 146/305 (47%), Gaps = 28/305 (9%) Frame = +2 Query: 6 NIGLLGHVDSGKTTLAKA---------LSSISSTAAFDKNPQSVERGITLDLGFSGLLVD 56 N+G +GHVD GKTTL A L++ S A DK+P+ RGIT+ Sbjct: 2516066 NVGTIGHVDHGKTTLTAAITKTLSDRGLANFKSYAQIDKSPEERSRGITI---------- 2516215 Query: 57 APAHLP-QGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIG 115 +H+ + + +DCPGH I+ +I GA +D +LVV A G Q QT E +I+ Sbjct: 2516216 TASHIEYESTNRHYAHIDCPGHQHYIKNMITGAAQMDGAILVVSAPDGPQEQTREHVILS 2516395 Query: 116 -ELLQKKLIVVINKIDVYPENQRASKLEKLRLRLAKTLEATTFGGQ----VPICAVSAL- 169 E+ ++V +NK+D N +E + + + + L F G+ V A AL Sbjct: 2516396 REVGIPAIVVFLNKMD----NADPDLVEIVEMEVRELLSKYGFDGEGTSFVKGAAAVALA 2516563 Query: 170 --------QGTH-IAELREVLREAYFQPQRNLADPLFMYVDHCFGIKGQGTVCTGTLLQG 220 G H I +L E+L P R + P M V+ F I G+GTV TG + QG Sbjct: 2516564 EDDASATEYGRHAIDKLVEILDTKIPLPNRAIDKPFLMPVEEVFSISGRGTVATGRIEQG 2516743 Query: 221 KVQVNNVIELPALGEQRKVK--SIQMFRKNVTSASMGDRIGLCVTQFNAKLLERG-IITQ 277 V+V + + + + KV ++MF K + A G+ +G+ + + + RG +I + Sbjct: 2516744 VVKVGDEVSIIGIKPIPKVSVTGLEMFGKILDFAQAGENVGVLLRGLKREDVVRGEVIAK 2516923 Query: 278 PGYLK 282 PG +K Sbjct: 2516924 PGTIK 2516938 Score = 47.4 bits (111), Expect = 3e-05 Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 11/136 (8%) Frame = +1 Query: 6 NIGLLGHVDSGKTTLAKALSSISSTAA---------FDKNPQSVERGITLDLGFSGLLVD 56 NI ++ HVD GKTTL+ +L + + + RGIT+ L + Sbjct: 479998 NISVIAHVDHGKTTLSDSLVARAGIIPEKMQGDVRFLSARKDEIARGITIKSSGVSLYFE 480177 Query: 57 APAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGE 116 H P +D PGH + ++ D L+VVD+ +G QT ++ + Sbjct: 480178 ---HGPDKSPHLINLIDSPGHVDFSSEVTAALRVTDGALVVVDSVEGVCVQTE--TVLRQ 480342 Query: 117 LLQKKLIVV--INKID 130 + +K++ V INK D Sbjct: 480343 AVAEKIVPVFFINKFD 480390 >gi|328873752|gb|GL883009.1| Dictyostelium fasciculatum unplaced genomic scaffold Scf_Dfasci-G-o-33e01.r1-3, whole genome shotgun sequence Length = 1429294 Score = 84.3 bits (207), Expect = 2e-16 Identities = 77/317 (24%), Positives = 132/317 (41%), Gaps = 45/317 (14%) Frame = +3 Query: 4 NFNIGLLGHVDSGKTTLAKAL------------------------SSISSTAAFDKNPQS 39 + NI ++GHVD+GK+T L S DK Sbjct: 632349 HINIVVIGHVDAGKSTTTGHLIYKCGGIDKRVIEKYEKEAAEMGKQSFKYAWVMDKLKAE 632528 Query: 40 VERGITLDLGFSGLLVDAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVD 99 ERGIT+D+ + + FT +D PGH I+ +I G D +LV+ Sbjct: 632529 RERGITIDIALWKF---------ETPKYYFTIIDAPGHRDFIKNMITGTSQADCAVLVIA 632681 Query: 100 AQKG-------KQTQTAE-CLIIGELLQKKLIVVINKIDVYPENQRASKLEKLRLRLAKT 151 + G K QT E L+ L +++IV INK+D N ++ +++ + Sbjct: 632682 SPTGEFEAGIAKNGQTREHALLAFTLGVRQMIVAINKMDEKSTNYSQARYDEIVKETSSF 632861 Query: 152 LEATTFGGQ-VPICAVSALQGTHIAE------------LREVLREAYFQPQRNLADPLFM 198 ++ + + V +S G ++ E L E L +A +P+R + PL + Sbjct: 632862 IKKIGYNPEKVSFIPISGWNGDNMLERSPHMAWYKGPTLLEAL-DAIVEPKRPVDKPLRI 633038 Query: 199 YVDHCFGIKGQGTVCTGTLLQGKVQVNNVIELPALGEQRKVKSIQMFRKNVTSASMGDRI 258 + + I G GTV G + G ++ + + +VKS++M + +T A GD + Sbjct: 633039 PLQDVYKIGGIGTVPVGRVETGILKPGMNVTFSPANQTTEVKSVEMHHEQLTQAQPGDNV 633218 Query: 259 GLCVTQFNAKLLERGII 275 G V + K + RG++ Sbjct: 633219 GFNVKNLSVKDIRRGMV 633269 >gi|328872098|gb|GL883010.1| Dictyostelium fasciculatum unplaced genomic scaffold Scf_Dfasci-F-a-25c12.r2-5, whole genome shotgun sequence Length = 4166812 Score = 62.8 bits (151), Expect = 6e-10 Identities = 51/177 (28%), Positives = 78/177 (44%), Gaps = 2/177 (1%) Frame = -3 Query: 7 IGLLGHVDSGKTTLAKALSSISSTAAFDKNPQSVERG-ITLDLG-FSGLLVDAPAHLPQG 64 + ++GH+D GKT+L + N E G IT +G F L H+ Sbjct: 2211965 VTIVGHIDHGKTSLLDYMRK--------SNVVQGEAGRITQHIGAFEVTLPSTQEHI--- 2211819 Query: 65 EQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGELLQKKLIV 124 TF+D PGHA+ + + G D+ +L+V G Q QT E + + + IV Sbjct: 2211818 -----TFMDTPGHAAFSQMRVRGVSTTDIAILIVAVDDGVQEQTKEAIRAIQAAKIPYIV 2211654 Query: 125 VINKIDVYPENQRASKLEKLRLRLAKTLEATTFGGQVPICAVSALQGTHIAELREVL 181 +NKID ++ +K R L + GG +P +SAL G I +L E + Sbjct: 2211653 ALNKIDKPGVDKELAK----RQLLENGVLLDGMGGDIPFVEISALTGQGIDQLEETI 2211495 Score = 60.1 bits (144), Expect = 4e-09 Identities = 79/323 (24%), Positives = 124/323 (38%), Gaps = 25/323 (7%) Frame = -1 Query: 6 NIGLLGHVDSGKTTLAKALSSISSTA-------AFDKNPQSVERGITLDLGFSGLLVDAP 58 N+ ++ HVD GKT++ L S T D N ERGIT+ + L Sbjct: 2560675 NVAIIAHVDHGKTSMVDQLLRQSGTLKDTQNERVMDSNALEKERGITIMAKNTSL----- 2560511 Query: 59 AHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGELL 118 + + VD PGH + ++D ++L+VDA +G QT L Sbjct: 2560510 ----NFKDYKLNIVDTPGHGDFGGEVERVLSMVDGVVLLVDATEGVMAQTKFVLSKALAA 2560343 Query: 119 QKKLIVVINKIDVYPENQRASKLEKLRLRLAKTLEATTFGGQVPICAVSALQG------- 171 + IVVINK+D R ++E L TL AT P SA G Sbjct: 2560342 GLRPIVVINKMD--RTTIRVDEVENEIFDLFATLGATDDQMGYPTLYASARMGWAVRSRG 2560169 Query: 172 ---THIAELREVLREAYFQPQRNLADPLFMYVDHCFGIKGQGTVCTGTLLQGKVQVNNVI 228 I + + + E P+ + P M V + G + TG + G V++ + Sbjct: 2560168 DDQKGITPILDTIIEYVHAPKVEVDKPFSMLVTNLETDPFLGRIVTGKVYSGSVKIGQPL 2559989 Query: 229 ELPALG----EQRKVKSI----QMFRKNVTSASMGDRIGLCVTQFNAKLLERGIITQPGY 280 + ++ E+ KV I + R + + GD IG+ NA + + P Sbjct: 2559988 RVVSVDGKSIEEGKVTKIFARRGVERLTLEEGNAGDIIGIAGFP-NATV--TNTVADPTI 2559818 Query: 281 LKPIYAVCLQFKPIRYYKEVIKS 303 +P+ A + + Y EV S Sbjct: 2559817 TEPLPAQAIDPPVLAMYFEVNNS 2559749 Score = 48.9 bits (115), Expect = 9e-06 Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 30/164 (18%) Frame = +2 Query: 4 NFNIGLLGHVDSGKTT------------------------LAKALSSISSTAAFDKNPQS 39 + N+ ++GHVD+GK+T LA S D++ + Sbjct: 2511851 SLNMVVIGHVDAGKSTTMGHLLFKVGAVDQRTIAKFERESLAIGKGSFHFAWVLDEHTEE 2512030 Query: 40 VERGITLDLGFSGLLVDAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVD 99 ERG+T+D+ + + + T +D PGH + +I GA D+ +L+++ Sbjct: 2512031 RERGVTMDVCVRYF---------ETKHRRVTLLDAPGHRDFVPNMISGATQADVGVLLIN 2512183 Query: 100 AQK-----GKQTQTAECLIIGELLQ-KKLIVVINKIDVYPENQR 137 A + ++ QT E ++ + L +LIV INK+D+ NQ+ Sbjct: 2512184 ASEFESGFCEEGQTREHAVLAKSLGIVQLIVAINKMDMIDWNQQ 2512315 Score = 31.2 bits (69), Expect = 1.9 Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 3/75 (4%) Frame = +3 Query: 9 LLGHVDSGKTTLAKALSSISSTAAFDKNPQSVERG---ITLDLGFSGLLVDAPAHLPQGE 65 ++G D GK++++K L S+ + ++ G IT+ LVD P + G Sbjct: 2341719 IVGPTDVGKSSISKILLGYSTRLGYAPTFVDLDPGQGSITIPGAVCASLVDKPVDIEDGL 2341898 Query: 66 QLQFTFVDCPGHASL 80 FV GH SL Sbjct: 2341899 TNSLPFVQYYGHTSL 2341943 >gi|328866594|gb|GL883026.1| Dictyostelium fasciculatum unplaced genomic scaffold Scf_EU5ZYIE02H8LDV-5, whole genome shotgun sequence Length = 1919465 Score = 61.2 bits (147), Expect = 2e-09 Identities = 47/132 (35%), Positives = 68/132 (51%), Gaps = 10/132 (7%) Frame = +1 Query: 9 LLGHVDSGKTTLAKALSSISSTAAFDKNPQSVE-RGITLDLGFSGLLVDAPAHLPQ--GE 65 +LGHVD+GKT+L L I ST N Q E RGIT +G S + V+ + E Sbjct: 1031845 ILGHVDTGKTSL---LDKIRST-----NVQGGEARGITQQIGASFIPVENIRDQAKDLAE 1032000 Query: 66 QLQFTF-------VDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGELL 118 +L+F F +D PGH S G+ + DL +LV+D G + QT E + + + Sbjct: 1032001 RLKFEFKLPGLLLIDTPGHESFNNLRSRGSGLCDLAILVIDIMHGLEAQTIESINLLRMR 1032180 Query: 119 QKKLIVVINKID 130 + IV +NK+D Sbjct: 1032181 KTPFIVALNKVD 1032216 >gi|328864870|gb|GL883029.1| Dictyostelium fasciculatum unplaced genomic scaffold Scf_EUAJFUG02HR96I-5, whole genome shotgun sequence Length = 3408800 Score = 48.1 bits (113), Expect = 2e-05 Identities = 39/139 (28%), Positives = 59/139 (42%), Gaps = 14/139 (10%) Frame = +1 Query: 6 NIGLLGHVDSGKTTLAKALSS----ISSTAAFDKNPQSV-----ERGITLDLGFSGLLVD 56 N+ ++ HVD GKTTL+ +L I+ A D S ERGIT+ L + Sbjct: 1717342 NMSVIAHVDHGKTTLSDSLIQRAGIIAEKVAGDMRYMSTRADEQERGITIKASSVSLHFE 1717521 Query: 57 APAH--LPQG---EQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAEC 111 LP G +D PGH + ++ D L+V+D +G QT Sbjct: 1717522 ITEKDKLPPGCVSPSFLINLIDSPGHVDFSSEVTAALRVTDGALVVIDCVEGVCVQTETV 1717701 Query: 112 LIIGELLQKKLIVVINKID 130 L + K ++ +NK+D Sbjct: 1717702 LRQAVAERIKPVLFVNKVD 1717758 Score = 46.2 bits (108), Expect = 6e-05 Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 7/104 (6%) Frame = +1 Query: 34 DKNPQSVERGITLDLGFSGLLVDAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDL 93 D N + +G T+++G AH + E+ ++T +D PGH + + +I GA D+ Sbjct: 2852887 DTNEEERAKGKTVEVG--------RAHF-ETEKKRYTILDAPGHKAYVPNMISGAAQADV 2853039 Query: 94 MLLVVDAQKGK------QTQTAECLIIGELLQ-KKLIVVINKID 130 +LV+ ++KG+ QT E + +++ K LIV++NK+D Sbjct: 2853040 AILVISSKKGEFEAGVDGGQTIEHARLAKMIGIKHLIVLVNKMD 2853171 Score = 45.1 bits (105), Expect = 1e-04 Identities = 40/164 (24%), Positives = 68/164 (41%), Gaps = 6/164 (3%) Frame = -2 Query: 6 NIGLLGHVDSGKTTLAKALSSISSTAAFDKNPQSVERGITLDLGF------SGLLVDAPA 59 NIG++ HVD+GKTT + + S K V RG T+ + + G+ + A Sbjct: 2153836 NIGIIAHVDAGKTTTCERMLFYSGEI---KRIGEVHRGDTV-MDYLKMERERGITITAAT 2153669 Query: 60 HLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGELLQ 119 + + VD PGH + +++D + + DA G Q Q+ E + Sbjct: 2153668 ITFPWDNHRINLVDTPGHVDFTVEVERSVRVMDGTVAIFDAVAGVQAQSITVWNQSERYK 2153489 Query: 120 KKLIVVINKIDVYPENQRASKLEKLRLRLAKTLEATTFGGQVPI 163 + INK+D + + +EK + L T Q+P+ Sbjct: 2153488 VPRLAFINKMD-----REGATMEKTLKMMKNRLGCTPLVLQMPL 2153372 Score = 30.4 bits (67), Expect = 3.3 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 3/58 (5%) Frame = +1 Query: 292 KPIRYYKEVIKSMRKMHISVGH---NTVMANVTLFRDTDGTTSTFQLDKEYEYMEDVQ 346 K I Y +IK ++K ++ V NTV+ L + G + KE Y +D+Q Sbjct: 2730604 KQIEKYTGIIKLLKKSNVKVDRYFINTVLHACKLTNNPQGVFQVYDTFKEMNYTKDIQ 2730777 >gi|328876102|gb|GL883006.1| Dictyostelium fasciculatum unplaced genomic scaffold Scf_Dfasci-G-b-205a01.r1-3, whole genome shotgun sequence Length = 2485436 Score = 43.9 bits (102), Expect = 3e-04 Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 2/91 (2%) Frame = -3 Query: 57 APAHLPQGEQLQFTFVDCPGHASLIRTIIGG--AQIIDLMLLVVDAQKGKQTQTAECLII 114 +P+ + + TFVD GH I+T + G + D +L+V A G T E L I Sbjct: 585237 SPSEIAELSSKIITFVDTAGHCKYIKTTLFGMTSHAPDFSMLMVSANNGCVGMTKEHLGI 585058 Query: 115 GELLQKKLIVVINKIDVYPENQRASKLEKLR 145 L+ + VV+ KID PEN + ++ Sbjct: 585057 ALALRVPVFVVVTKIDRCPENVMTETMNDIK 584965 Score = 34.7 bits (78), Expect = 0.17 Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 4/97 (4%) Frame = -2 Query: 192 LADPLFMYVDHCFGIKGQGTVCTGTLLQGKVQV-NNVIELPALGEQ---RKVKSIQMFRK 247 L P + +D + + G GTV +GTL++G + V N++ P Q +VKSI R Sbjct: 584767 LEKPSQLDIDSIWNVTGVGTVVSGTLMKGSITVGENLLLGPDEHGQFTSVQVKSIHSKRL 584588 Query: 248 NVTSASMGDRIGLCVTQFNAKLLERGIITQPGYLKPI 284 V G + + K + +G+I KP+ Sbjct: 584587 PVKQVRAGQTASVAIKMKVKKSIRKGMILTHPSAKPV 584477 Score = 30.8 bits (68), Expect = 2.5 Identities = 13/54 (24%), Positives = 33/54 (61%), Gaps = 2/54 (3%) Frame = +3 Query: 80 LIRTIIGGAQII--DLMLLVVDAQKGKQTQTAECLIIGELLQKKLIVVINKIDV 131 +I+ ++ A ++ ++M++V++ +KGK+ + E + I + VV+ +ID+ Sbjct: 1562385 IIKKVVAAAVVVVEEIMIIVIETEKGKEIEIIEIIKIAIVAAVVAAVVVVEIDI 1562546 >gi|328868227|gb|GL883021.1| Dictyostelium fasciculatum unplaced genomic scaffold Scf_ET2XIPL01COFD4-5, whole genome shotgun sequence Length = 3468650 Score = 42.0 bits (97), Expect = 0.001 Identities = 32/136 (23%), Positives = 58/136 (42%), Gaps = 11/136 (8%) Frame = +3 Query: 6 NIGLLGHVDSGKTTLAKAL---------SSISSTAAFDKNPQSVERGITLDLGFSGLLVD 56 N+ L+G++ SGK+ L + ++ D ERG+++ L+ Sbjct: 3171552 NVCLVGNLHSGKSKFMDMLVNQTHERKWTHAKASRYTDTRNDEQERGMSIKSAPMSLI-- 3171725 Query: 57 APAHLPQGEQLQF--TFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLII 114 LP + +D PGH + ++ ++ D ++VVDA +G QT + + Sbjct: 3171726 ----LPNSNDKSYLVNVLDTPGHVNFTDEVLASLRLCDAAIVVVDALEGVMMQTERLIKL 3171893 Query: 115 GELLQKKLIVVINKID 130 + VVINK+D Sbjct: 3171894 AVQEGLAIAVVINKVD 3171941 Score = 29.6 bits (65), Expect = 5.6 Identities = 14/51 (27%), Positives = 29/51 (56%) Frame = -2 Query: 93 LMLLVVDAQKGKQTQTAECLIIGELLQKKLIVVINKIDVYPENQRASKLEK 143 ++L V+D+ G Q + K +I+++NK D+Y +N+R ++ E+ Sbjct: 1977472 VVLFVIDSTVGLTEQDLKIAGFITEQNKSVIILVNKWDLYTKNKRTAQKER 1977320 >gi|328871053|gb|GL883014.1| Dictyostelium fasciculatum unplaced genomic scaffold Scf_Dfasci-F-a-11f03.f1-5, whole genome shotgun sequence Length = 911335 Score = 40.8 bits (94), Expect = 0.002 Identities = 43/180 (23%), Positives = 71/180 (39%), Gaps = 14/180 (7%) Frame = -3 Query: 6 NIGLLGHVDSGKTTLAKALSSISST--------------AAFDKNPQSVERGITLDLGFS 51 NIG+ H+DSGKTTL + + + A D E+GIT Sbjct: 777650 NIGISAHIDSGKTTLTERILFYTGRIKEIHDVKGKDGVGAKMDSMDLEREKGIT------ 777489 Query: 52 GLLVDAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAEC 111 + + A + ++ +D PGH + +++D +LV+ G Q+QT Sbjct: 777488 ---IQSAATYCKWKENHVNIIDTPGHVDFTIEVERALRVLDGAVLVMCGVSGVQSQTITV 777318 Query: 112 LIIGELLQKKLIVVINKIDVYPENQRASKLEKLRLRLAKTLEATTFGGQVPICAVSALQG 171 + INK+D N + +++LR +L A Q+PI L+G Sbjct: 777317 DRQMRRYNVPRLTFINKLDRVGANP-WNVIDQLRRKLQLNAAAV----QIPIGLEVNLEG 777153 >gi|328875389|gb|GL883007.1| Dictyostelium fasciculatum unplaced genomic scaffold Scf_Dfasci-G-p-12c09.r1-3, whole genome shotgun sequence Length = 1770755 Score = 40.0 bits (92), Expect = 0.004 Identities = 55/258 (21%), Positives = 94/258 (36%), Gaps = 31/258 (12%) Frame = +2 Query: 3 INFNIGLLGHVDSGKTTLAKALSSISSTAA------------------------FDKNPQ 38 I+ N +D GKTTL+ L +++ T DK Sbjct: 1139249 IDINFFFFFCLDHGKTTLSTKLLTLTGTLPKNIYGSGEESLGQQEKNENRREQYLDKLQV 1139428 Query: 39 SVERGITLDLGFSGLLVDAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVV 98 ERGIT+ ++ + +Q +D PGH + +LVV Sbjct: 1139429 EKERGITVKAQTCTMIYHNKS---DDKQYMLNLIDTPGHVDFTYEVSRSLMACQGAILVV 1139599 Query: 99 DAQKGKQTQTAECLIIGELLQKKLIVVINKIDVYPENQRASKLEKLRLRLAKTLEATTFG 158 DA +G Q QT + +++ +INKID+ N + + L+ T Sbjct: 1139600 DACQGVQAQTMANYYLALEAGLEVVPLINKIDLPTANVDL---------VCQQLKDTFGF 1139752 Query: 159 GQVPICAVSALQGTHIAELREVLREAYFQP-------QRNLADPLFMYVDHCFGIKGQGT 211 + VSA G IAE+ + + P R A + D F + +G Sbjct: 1139753 HPADVLQVSAKTGIGIAEILPAVIDRIPPPALSDEEEARKKAPFKALLFDSWFD-RFRGV 1139929 Query: 212 VCTGTLLQGKVQVNNVIE 229 +C ++ G V+ ++++ Sbjct: 1139930 ICLFKVVDGSVKRGDIVQ 1139983 Score = 30.0 bits (66), Expect = 4.3 Identities = 12/35 (34%), Positives = 26/35 (74%), Gaps = 1/35 (2%) Frame = -1 Query: 290 QFKPIRYYKEVIKSMRKMHISVG-HNTVMANVTLF 323 QF+P Y ++IK+++ +H+S HNT+++++ L+ Sbjct: 777569 QFEPRIIYDDIIKAVKMVHMSGSLHNTIISDLPLY 777465 >gi|328871378|gb|GL883013.1| Dictyostelium fasciculatum unplaced genomic scaffold Scf_ET2XIPL01CNAVH-3, whole genome shotgun sequence Length = 1908399 Score = 30.8 bits (68), Expect = 2.5 Identities = 12/22 (54%), Positives = 17/22 (77%) Frame = -1 Query: 6 NIGLLGHVDSGKTTLAKALSSI 27 NIG +GHV GK+T+ KA+S + Sbjct: 1830474 NIGTIGHVAHGKSTVVKAISGV 1830409 Score = 28.9 bits (63), Expect = 9.5 Identities = 16/42 (38%), Positives = 22/42 (52%) Frame = +1 Query: 3 INFNIGLLGHVDSGKTTLAKALSSISSTAAFDKNPQSVERGI 44 ++F + LLG +SGK+T+ K L SI D QS I Sbjct: 512458 LDFRVLLLGAGESGKSTVVKQLKSIYKITVDDAELQSYAANI 512583 Database: D.fasciculatum/genome.fa Posted date: Nov 21, 2011 7:46 PM Number of letters in database: 31,019,208 Number of sequences in database: 25 Lambda K H 0.320 0.136 0.388 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 14,126,611 Number of Sequences: 25 Number of extensions: 189323 Number of successful extensions: 908 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 8 Number of HSP's that attempted gapping in prelim test: 582 Number of HSP's gapped (non-prelim): 583 length of query: 511 length of database: 10,339,736 effective HSP length: 104 effective length of query: 407 effective length of database: 10,337,136 effective search space: 4207214352 effective search space used: 4207214352 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 63 (28.9 bits)