TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SPP00000092_1.0 # Protein # Eukaryotic elongation factor (eEFSec) # Drosophila melanogaster # Complete (511 letters) Database: C.fasciculata/genome.fa 1089 sequences; 37,048,325 total letters Searching...................................................done Score E Sequences producing significant alignments: (bits) Value Cf_Contig741 | | 1 to 201246 270 2e-72 Cf_Contig1044 | | 1 to 114976 99 9e-21 Cf_Contig900 | | 1 to 239103 99 9e-21 Cf_Contig1068 | | 1 to 155071 89 9e-18 Cf_Contig246 | | 1 to 1408 80 4e-15 Cf_Contig870 | | 1 to 62773 63 7e-10 Cf_Contig968 | | 1 to 318049 57 3e-08 Cf_Contig1009 | | 1 to 121504 52 1e-06 Cf_Contig960 | | 1 to 129949 49 8e-06 Cf_Contig606 | | 1 to 135677 49 8e-06 Cf_Contig599 | | 1 to 11661 49 8e-06 Cf_Contig1059 | | 1 to 41438 46 9e-05 Cf_Contig1069 | | 1 to 371363 44 3e-04 Cf_Contig969 | | 1 to 310710 44 3e-04 Cf_Contig181 | | 1 to 1222 42 0.002 Cf_Contig1056 | | 1 to 310674 32 1.7 Cf_Contig1002 | | 1 to 61726 29 8.6 >Cf_Contig741 | | 1 to 201246 Length = 201246 Score = 270 bits (690), Expect = 2e-72 Identities = 177/466 (37%), Positives = 245/466 (52%), Gaps = 72/466 (15%) Frame = +1 Query: 3 INFNIGLLGHVDSGKTTLAKALSSISSTAAFDKNPQSVERGITLDLGFSGLLV------D 56 +N N+GLLGHVDSGKT LAKALS +STAAFDK+PQS RGITLDLGFS V D Sbjct: 127309 LNVNVGLLGHVDSGKTALAKALSRTASTAAFDKSPQSQSRGITLDLGFSACEVAQDDSDD 127488 Query: 57 APAHLPQG--EQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLII 114 A A L +++Q T VDCPGHASLIRT++GGAQIID M+LV+DA KG Q QTAECL++ Sbjct: 127489 ARAVLRAANLDKVQCTLVDCPGHASLIRTVVGGAQIIDAMVLVIDATKGMQAQTAECLVL 127668 Query: 115 GELLQKKLIVVINKIDVYPENQRASKL-------EKLRLRLAKTL--------------- 152 GE+L K L+V +NK+D A K KL+L +T Sbjct: 127669 GEVLAKPLVVALNKVDAVQGATLAEKTAAVAAMKRKLQLTFRRTRWPTVTVVEVAAAPRD 127848 Query: 153 ----EATTFGGQVPICAVSA-----LQGTHIAELREVLREAYFQPQRNLADPLFMYVDHC 203 +++ G VSA L+ +A L+ +P+R +M VDHC Sbjct: 127849 VADGSSSSSSGMAAPYNVSALLPQVLRAVDLAALKAAKAREGERPER-----FYMLVDHC 128013 Query: 204 FGIKGQGTVCTGTLLQGKVQVNNVIELPALGEQRKVKSIQMFRKNVTSASMGDRIGLCVT 263 F ++GQGTV TGT++ G V+V + + +P L RKVK +Q+F + V +A GDR+GLCV Sbjct: 128014 FAVRGQGTVFTGTVVAGMVRVGDTVLVPDLQTTRKVKGLQVFHQPVETARSGDRVGLCVA 128193 Query: 264 QFNAKLLERGIITQPG----YLKPIYAVCLQFKPIRYYKEVIKSMRKMHISVGHNTVMAN 319 QF+ +ERG++ L + Q +RY+ + + K HI++GH TVM Sbjct: 128194 QFDPASMERGVLCSSAGSERTLVSTSQLIAQVHKVRYHPFLADTHTKFHITIGHATVMGT 128373 Query: 320 VTLF------RDTDGTTSTFQLDKEYEYMEDVQPAEVQHNDVI----------------- 356 + F G+ TF E Y+E++ A V + Sbjct: 128374 MRYFSRPHVSAAAGGSGDTFDPSVESAYVEELGEAAVATYSTLQSSTDSAAVAGRPLPIG 128553 Query: 357 ------YALLQFESPVLSPPHSTLIASKLDMDVHSTSCRLAFWGRI 396 YA+L E PVL+ + ++A +LD++ CR+A G + Sbjct: 128554 AAASDFYAVLLLERPVLAAVGNAMVAMRLDVE-RDNFCRIALAGSV 128688 >Cf_Contig1044 | | 1 to 114976 Length = 114976 Score = 99.0 bits (245), Expect = 9e-21 Identities = 82/300 (27%), Positives = 142/300 (47%), Gaps = 31/300 (10%) Frame = +1 Query: 7 IGLLGHVDSGKTTLAKALSSISSTA---------AFDKNPQSVERGITLDLGFSGLLVDA 57 IG +GHVD GKTTL A++++ + + A DK+P+ R IT++ Sbjct: 19009 IGTIGHVDHGKTTLTSAITTVLAKSGRAQALDYFAIDKSPEEKSRKITINA--------- 19161 Query: 58 PAHLP-QGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLII-G 115 H+ + ++ + +DCPGH ++ +I GA +D ++VV A G QT E L+I Sbjct: 19162 -THVEYESDKRHYGHIDCPGHMDFVKNMITGAAQMDGGIIVVAATDGVMPQTREHLLICS 19338 Query: 116 ELLQKKLIVVINKIDVYPENQRASKLEKLRLRLAKTLEATTF-GGQVPI---CAVSALQG 171 ++ L+ INK+D+ + + + + + + LE F + PI A+ AL+G Sbjct: 19339 QIGLPALVGFINKVDMTDD----ETCDLVDMEVREQLEKYKFPAEETPIVRGSALKALEG 19506 Query: 172 -----THIAELREVLREAYFQPQRNLADPLFMYVDHCF--GIKGQGTVCTGTLLQGKVQV 224 I EL + E P RN P M ++H + G + + TG + QG +++ Sbjct: 19507 DAKYEAAILELVKKCDEWIPDPPRNTDKPFLMAIEHVYEIGKDKKSVIVTGRVDQGVLKL 19686 Query: 225 NNVIELPALGEQR---KVKSIQMFRKNVTSASMGDRIGLCV------TQFNAKLLERGII 275 N EL ++ KV I+M+ K + GD +G+ + T + +ERG++ Sbjct: 19687 NTEAELAGFSAKKSTVKVTGIEMYHKTLDECMPGDSVGVSIVGAGDTTSLSKDNVERGMV 19866 >Cf_Contig900 | | 1 to 239103 Length = 239103 Score = 99.0 bits (245), Expect = 9e-21 Identities = 82/300 (27%), Positives = 142/300 (47%), Gaps = 31/300 (10%) Frame = -3 Query: 7 IGLLGHVDSGKTTLAKALSSISSTA---------AFDKNPQSVERGITLDLGFSGLLVDA 57 IG +GHVD GKTTL A++++ + + A DK+P+ R IT++ Sbjct: 70444 IGTIGHVDHGKTTLTSAITTVLAKSGRAQALDYFAIDKSPEEKSRKITINA--------- 70292 Query: 58 PAHLP-QGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLII-G 115 H+ + ++ + +DCPGH ++ +I GA +D ++VV A G QT E L+I Sbjct: 70291 -THVEYESDKRHYGHIDCPGHMDFVKNMITGAAQMDGGIIVVAATDGVMPQTREHLLICS 70115 Query: 116 ELLQKKLIVVINKIDVYPENQRASKLEKLRLRLAKTLEATTF-GGQVPI---CAVSALQG 171 ++ L+ INK+D+ + + + + + + LE F + PI A+ AL+G Sbjct: 70114 QIGLPALVGFINKVDMTDD----ETCDLVDMEVREQLEKYKFPAEETPIVRGSALKALEG 69947 Query: 172 -----THIAELREVLREAYFQPQRNLADPLFMYVDHCF--GIKGQGTVCTGTLLQGKVQV 224 I EL + E P RN P M ++H + G + + TG + QG +++ Sbjct: 69946 DAKYEAAILELVKKCDEWIPDPPRNTDKPFLMAIEHVYEIGKDKKSVIVTGRVDQGVLKL 69767 Query: 225 NNVIELPALGEQR---KVKSIQMFRKNVTSASMGDRIGLCV------TQFNAKLLERGII 275 N EL ++ KV I+M+ K + GD +G+ + T + +ERG++ Sbjct: 69766 NTEAELAGFSAKKSTVKVTGIEMYHKTLDECMPGDSVGVSIVGAGDTTSLSKDNVERGMV 69587 >Cf_Contig1068 | | 1 to 155071 Length = 155071 Score = 89.0 bits (219), Expect = 9e-18 Identities = 80/260 (30%), Positives = 118/260 (45%), Gaps = 35/260 (13%) Frame = -2 Query: 6 NIGLLGHVDSGKTTLAKALSSISSTAAFDKNPQSVERGITLDLGFS-------------G 52 NIG +GHV GK+T+ +ALS + + K + IT+ LG++ G Sbjct: 99567 NIGTIGHVAHGKSTVVRALSGVKT----QKFHREAVMNITIHLGYANAKVYQCGTCPRPG 99400 Query: 53 LLVDAPAHLPQGE-----------QLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQ 101 P+ P + F+FVDCPGH L+ T++ GA I+D LL++ A Sbjct: 99399 CYQTYPSSQPDSTPCPTCGATMTLKRHFSFVDCPGHDVLMATMLNGAAIMDAALLLIAAN 99220 Query: 102 KG-KQTQTAECLIIGELLQ-KKLIVVINKIDVYPENQRASKLEKLRLRLAKTLEATTFGG 159 + Q QT E L E+++ LIV+ NKID+ E + + ++R L Sbjct: 99219 ESFPQPQTLEHLKAVEIMKLHHLIVLQNKIDLVGEVKAHDQYRQIRAYL------DNIAL 99058 Query: 160 QVPICAVSALQGTHIAELREVLREAYFQPQRNLADPLFMYVDHCFGIKG---------QG 210 VPI +SA ++ L E L PQR L P+ M V F I +G Sbjct: 99057 NVPIVPISAQLKRNVDYLLEYLLHIP-MPQRQLKTPVRMTVVRSFDINKPGEGDIENLKG 98881 Query: 211 TVCTGTLLQGKVQVNNVIEL 230 V GT+ QG +QV V+E+ Sbjct: 98880 GVAGGTVTQGVIQVGQVVEI 98821 Score = 72.8 bits (177), Expect = 7e-13 Identities = 75/263 (28%), Positives = 117/263 (44%), Gaps = 38/263 (14%) Frame = -3 Query: 6 NIGLLGHVDSGKTTLAKALSSISSTAAFDKNPQSVERGITLDLGFS-------------G 52 NIG +GHV GK+T+ +ALS + + K + IT+ LG++ G Sbjct: 102836 NIGTIGHVAHGKSTVVRALSGVKT----QKFHREAVMNITIHLGYANAKVYQCGTCPRPG 102669 Query: 53 LLVDAPAHLPQGE-----------QLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQ 101 P+ P + F+FVDCPGH L+ T++ GA I+D LL++ A Sbjct: 102668 CYQTYPSSQPDSTPCPTCGATMTLKRHFSFVDCPGHDVLMATMLNGAAIMDAALLLIAAN 102489 Query: 102 KG-KQTQTAECLIIGELL-QKKLIVVINKIDVYPENQRASKLEKLRLRLAKTLEATTFGG 159 + Q QT E L E++ L+V+ NK+D+ + A++ + L T A Sbjct: 102488 ESFPQPQTLEHLAAAEMIGVPSLLVLQNKVDLVSKAHAAAQYAIIHHYLT-TKTAYARAP 102312 Query: 160 QVPICAVSALQGTHIAELREVLREAYFQPQRNLADPLFMYVDHCF-----GIKGQ----- 209 +PICA L ++A L + L P+R L ++ + F G GQ Sbjct: 102311 VIPICAQKHL---NLAYLLDYLVHIPL-PRRQLRQTPYLSILRSFDVSLPGPAGQRGCEN 102144 Query: 210 --GTVCTGTLLQGKVQVNNVIEL 230 G V GT+ G + V + IE+ Sbjct: 102143 LKGGVVGGTVAAGVLCVGDEIEI 102075 >Cf_Contig246 | | 1 to 1408 Length = 1408 Score = 80.1 bits (196), Expect = 4e-15 Identities = 77/314 (24%), Positives = 129/314 (41%), Gaps = 44/314 (14%) Frame = -2 Query: 4 NFNIGLLGHVDSGKTTLAKAL------------------------SSISSTAAFDKNPQS 39 + N+ ++GHVD+GK+T L +S DK Sbjct: 1389 HMNLVVVGHVDAGKSTATGHLIYKCGGIDKRTIEKFEKEAAEIGKASFKYAWVLDKLKAE 1210 Query: 40 VERGITLDLGFSGLLVDAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVD 99 ERGIT+D+ + + FT +D PGH I+ +I G D +L++D Sbjct: 1209 RERGITIDIALWKF---------ESPKSVFTIIDAPGHRDFIKNMITGTSQADAAILMID 1057 Query: 100 AQKG-------KQTQTAE-CLIIGELLQKKLIVVINKIDVYPENQRASKLEKLRLRLAKT 151 + +G K QT E L+ L K+++V NK+D ++ E++ + Sbjct: 1056 STQGGFEAGISKDGQTREHALLAFTLGVKQMVVCCNKMDDKTVQYAQARYEEISKEVGAY 877 Query: 152 LEATTFGGQ-VPICAVSALQGTHIAELRE--------VLREAYF---QPQRNLADPLFMY 199 L+ + + V +S QG ++ E + L EA P R + PL + Sbjct: 876 LKRVGYNPEKVRFIPISGWQGDNMIEKSDNMSWYKGPTLLEALDLLEAPVRPVDKPLRLP 697 Query: 200 VDHCFGIKGQGTVCTGTLLQGKVQVNNVIELPALGEQRKVKSIQMFRKNVTSASMGDRIG 259 + + I G GTV G + G ++ +V+ +VKSI+M + + A GD +G Sbjct: 696 LQDVYKIGGIGTVPVGRVETGVMKPGDVVVFAPANVTTEVKSIEMHHEQLAEAVPGDNVG 517 Query: 260 LCVTQFNAKLLERG 273 V + K + RG Sbjct: 516 FNVKNVSVKDIRRG 475 >Cf_Contig870 | | 1 to 62773 Length = 62773 Score = 62.8 bits (151), Expect = 7e-10 Identities = 61/227 (26%), Positives = 93/227 (40%), Gaps = 16/227 (7%) Frame = +2 Query: 7 IGLLGHVDSGKTTLAKALSSISSTAAFDKNPQSVERGITLDLGFSGLLVDAPAHLPQGEQ 66 + ++GHVD GKTTL L + A GIT ++G + P G Sbjct: 44894 VSIMGHVDHGKTTLLDHLRRTNVAAG-------EAGGITQNVGAFQVKT------PDGHF 45034 Query: 67 LQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGELLQKKLIVVI 126 + TF+D PGHA+ GA D+++L+V A G Q QT E + + + ++V I Sbjct: 45035 I--TFIDTPGHAAFTAMREVGATTNDMIILIVSAVDGVQPQTREVIELAQRQGTPMLVAI 45208 Query: 127 NKIDVYPENQRASKLEKLRLRLAKTLEATTFGGQVPICAVSALQGTHIAELREVLR---- 182 KID P K +LR +E GG + + + A G I++L E ++ Sbjct: 45209 TKIDRQPN----CDYIKDQLRTC-NVELEEDGGDIQLVKICAKDGQGISDLLEAIQLQAE 45373 Query: 183 ------------EAYFQPQRNLADPLFMYVDHCFGIKGQGTVCTGTL 217 E Y RNL V C ++ +GT+ Sbjct: 45374 LCEVATPNPSRAELYVLESRNLGQTEVAAVVRCGTVQPGQVFVSGTV 45514 >Cf_Contig968 | | 1 to 318049 Length = 318049 Score = 57.4 bits (137), Expect = 3e-08 Identities = 39/126 (30%), Positives = 57/126 (45%) Frame = +1 Query: 9 LLGHVDSGKTTLAKALSSISSTAAFDKNPQSVERGITLDLGFSGLLVDAPAHLPQGEQLQ 68 +LGHV GKT L L ++ T D+ P + + I S P + Sbjct: 60412 ILGHVGHGKTAL---LDALQDTRIGDEEPHHITQSIRAFTVAS----------PNQQGTS 60552 Query: 69 FTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGELLQKKLIVVINK 128 FTF+D PGH + T + D ++LVV G QT E + + + K +IVV K Sbjct: 60553 FTFLDSPGHQLFVETRFHLHLVSDFIILVVSVVDGVGAQTHETVKVALNVDKPVIVVFTK 60732 Query: 129 IDVYPE 134 ID+ P+ Sbjct: 60733 IDLLPD 60750 >Cf_Contig1009 | | 1 to 121504 Length = 121504 Score = 52.0 bits (123), Expect = 1e-06 Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 3/128 (2%) Frame = +1 Query: 6 NIGLLGHVDSGKTTLAKALSSISSTAAFDKNPQSVERGITLDLGFSGLLVDAPAHLPQGE 65 NI + G + GKT+L + L A+ K ER +TL + P Sbjct: 120886 NIVVAGSLHHGKTSLVEILLG---EQAYHKRKDEEERAMTLKTHVITAVAGGAVLQPTSR 121056 Query: 66 QLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECL---IIGELLQKKL 122 QL T +D PGH LI + G ++ D +LL VDA + + + L ++GE Q + Sbjct: 121057 QL--TLLDTPGHPDLIGEAVAGMRLADAVLLCVDAAESLSEHSEQLLRHAVVGE--QLPV 121224 Query: 123 IVVINKID 130 ++V+ K+D Sbjct: 121225 VLVLTKVD 121248 >Cf_Contig960 | | 1 to 129949 Length = 129949 Score = 49.3 bits (116), Expect = 8e-06 Identities = 48/203 (23%), Positives = 82/203 (40%), Gaps = 24/203 (11%) Frame = +1 Query: 6 NIGLLGHVDSGKTT----------LAKALSSI-SSTAAFDKNPQSVERGITLDLGFSGLL 54 NIG++ H+D+GKTT + K + + S T D + +RGIT+ L Sbjct: 116641 NIGIVAHIDAGKTTTTERMLFYAGVTKRVGDVDSGTTTTDFMKEEADRGITIQSAAVSL- 116817 Query: 55 VDAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLII 114 + +D PGH + +++D ++ + DA G Q Q+ L Sbjct: 116818 --------RWHDHDVNLIDTPGHVDFTVEVERAMRVVDGVVALFDASAGVQAQSYTVLQQ 116973 Query: 115 GELLQKKLIVVINKIDVYPENQRAS--------KLEKLRLRLAKTLEATTFGGQVPI--- 163 L+ +NK+D Y + + + ++E L L++ E +F G V + Sbjct: 116974 SRKFHVPLLAFLNKMDKYNADFKMAVASIRDKLQVEPLLLQVPLHGEDGSFVGVVDVVEQ 117153 Query: 164 --CAVSALQGTHIAELREVLREA 184 C G+ + LR L EA Sbjct: 117154 TACRFGGKNGSEV--LRTELSEA 117216 >Cf_Contig606 | | 1 to 135677 Length = 135677 Score = 49.3 bits (116), Expect = 8e-06 Identities = 43/132 (32%), Positives = 62/132 (46%), Gaps = 10/132 (7%) Frame = -2 Query: 9 LLGHVDSGKTTLAKALSSISSTAAFDKNPQSVERG-ITLDLGFSGL----LVDAPAHLPQ 63 +LGHVD+GKT+L L I ST N Q E G IT +G + LV A L + Sbjct: 66061 VLGHVDTGKTSL---LDRIRST-----NVQGGEAGGITQQIGATFFPQEKLVADTAELNK 65906 Query: 64 GEQLQFTF-----VDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGELL 118 + +D PGH S G+ + D+ +LVVD G + QT E + + Sbjct: 65905 RYNYKLDVPGLLVIDTPGHESFTNLRSRGSSLCDIAILVVDIMHGLEQQTRESIRLLREK 65726 Query: 119 QKKLIVVINKID 130 + I+ +NK+D Sbjct: 65725 RCPFIIALNKVD 65690 >Cf_Contig599 | | 1 to 11661 Length = 11661 Score = 49.3 bits (116), Expect = 8e-06 Identities = 71/279 (25%), Positives = 113/279 (40%), Gaps = 46/279 (16%) Frame = +2 Query: 11 GHVDSGK-TTLAKAL-----------------------SSISSTAAFDKNPQSVERGITL 46 GHVD+GK TTL L S D++ + RG+T+ Sbjct: 665 GHVDAGKSTTLGHLLLLLGRVTMEEVDRNEKNGRSQHKESFKYAWLLDQSEEERRRGVTI 844 Query: 47 DLG-FSGLLVDAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDA----- 100 D G F + H+ +D PGH + +I A D LLVV+A Sbjct: 845 DSGSFCFETANRRVHI----------LDAPGHKDFVLNMISSATQADAALLVVNAATSEF 994 Query: 101 QKGKQTQTAECLIIGELL-QKKLIVVINKID--VYPENQRASKLEKLRLRLAKTLEATTF 157 + G Q T E L++ + L ++V +NK+D + +++ + +L+L L +T A Sbjct: 995 ETGLQHGTKEHLLVLKTLGVGSIVVAVNKMDSVKFSKDRYDYVVRELQLLLKQTRIAE-- 1168 Query: 158 GGQVPICAVSALQGTHIAELREVLREAYFQP------------QRNLADPLFMYVDHCFG 205 + C +S + GT+I E+ Y P R + PL + + G Sbjct: 1169DAVIGFCPISGMAGTNICEVDAAAAPWYKGPCLLDMIDKCPLESRLVGGPLRLSLQDVQG 1348 Query: 206 IKGQGTVCTGTLLQGKVQVNNVIELPALGEQR-KVKSIQ 243 V +G L G +NV+ +P G+ R VKS+Q Sbjct: 1349STLYAKVESGKLFTG----DNVVFVP--GDVRIAVKSVQ 1447 >Cf_Contig1059 | | 1 to 41438 Length = 41438 Score = 45.8 bits (107), Expect = 9e-05 Identities = 34/139 (24%), Positives = 53/139 (38%), Gaps = 14/139 (10%) Frame = -3 Query: 6 NIGLLGHVDSGKTTLAKAL---------SSISSTAAFDKNPQSVERGITLDLGFSGLLVD 56 N+ ++ HVD GK+TL+ +L D + RGIT+ L Sbjct: 40680 NMSVIAHVDHGKSTLSDSLVGAAGIIKMEEAGDKRIMDTRADEIARGITIKSTAISLHYR 40501 Query: 57 APAHL-----PQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAEC 111 P + +D PGH + ++ D L+VVD +G QT Sbjct: 40500 VPKEMISDLDDDKRDFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVEGVCVQTETV 40321 Query: 112 LIIGELLQKKLIVVINKID 130 L + + +V INK+D Sbjct: 40320 LRQALTERIRPVVFINKVD 40264 >Cf_Contig1069 | | 1 to 371363 Length = 371363 Score = 44.3 bits (103), Expect = 3e-04 Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 9/150 (6%) Frame = -3 Query: 6 NIGLLGHVDSGKTTLAKALSSISS-TAAFDKNPQSVERGITLDL----GFSGLLVDAPAH 60 NIG+ H+DSGKTTL++ + S + E G T+D G+ + + A Sbjct: 275661 NIGISAHIDSGKTTLSERILFYSGRIGKIHEVKGGTEVGATMDSMELEKERGITIRSAAT 275482 Query: 61 LPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGELLQK 120 + + +D PGH + +++D +L++ A G Q+QT L + +++ Sbjct: 275481 QCRWKNSTINVIDTPGHVDFTIEVERALRVLDGAILLMCAVGGVQSQT---LTVDRQMKR 275311 Query: 121 ---KLIVVINKIDVYPEN-QRASKLEKLRL 146 I INK+D N QRA K + RL Sbjct: 275310 YGVPRICFINKLDRDNANPQRALKQAQERL 275221 >Cf_Contig969 | | 1 to 310710 Length = 310710 Score = 43.9 bits (102), Expect = 3e-04 Identities = 36/143 (25%), Positives = 58/143 (40%), Gaps = 8/143 (5%) Frame = +1 Query: 6 NIGLLGHVDSGKTTL-------AKALSSISSTAAF-DKNPQSVERGITLDLGFSGLLVDA 57 N+ ++ HVD GKTTL A+ L + +T F D+ ERGIT+ +L+ Sbjct: 273136 NVSVVAHVDHGKTTLSDAMLRFAQLLPADGATGTFTDRLQVEKERGITIKAQTCSVLL-- 273309 Query: 58 PAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGEL 117 G Q +D PGH + + L+VD ++G + QT Sbjct: 273310 -TQRGSGTQYLINLIDTPGHVDFQYEVSRSLCASEGAALLVDVRQGVEAQTMAQFYAALE 273486 Query: 118 LQKKLIVVINKIDVYPENQRASK 140 ++ V+ K+D + K Sbjct: 273487 QDLTILPVLTKMDSVQNDAEVGK 273555 >Cf_Contig181 | | 1 to 1222 Length = 1222 Score = 41.6 bits (96), Expect = 0.002 Identities = 25/86 (29%), Positives = 41/86 (47%) Frame = -3 Query: 188 PQRNLADPLFMYVDHCFGIKGQGTVCTGTLLQGKVQVNNVIELPALGEQRKVKSIQMFRK 247 P R + PL + + + I G GTV G + G ++ +V+ +VKSI+M + Sbjct: 686 PVRPVDKPLRLPLQDVYKIGGIGTVPVGRVETGVMKPGDVVVFAPANVTTEVKSIEMHHE 507 Query: 248 NVTSASMGDRIGLCVTQFNAKLLERG 273 + A GD +G V + K + RG Sbjct: 506 QLAEAVPGDNVGFNVKNVSVKDIRRG 429 Score = 38.1 bits (87), Expect = 0.018 Identities = 21/70 (30%), Positives = 32/70 (45%) Frame = -1 Query: 34 DKNPQSVERGITLDLGFSGLLVDAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDL 93 DK ERGIT+D+ + + FT +D PGH I+ +I G D Sbjct: 1183 DKLKAERERGITIDIALWKF---------ESPKSVFTIIDAPGHRDFIKNMITGTSQADA 1031 Query: 94 MLLVVDAQKG 103 +L++D+ G Sbjct: 1030 AILMIDSTHG 1001 >Cf_Contig1056 | | 1 to 310674 Length = 310674 Score = 31.6 bits (70), Expect = 1.7 Identities = 31/134 (23%), Positives = 54/134 (40%), Gaps = 14/134 (10%) Frame = +3 Query: 64 GEQLQFTFVDCPGHA-------------SLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAE 110 G LQ TFVD PG+ L G + ++ +L +D ++G + Sbjct: 222381 GGGLQLTFVDMPGYGIEGMSDQWRDAAIELTDAYFGVRRSVNTVLYCMDCERGLTKTDIK 222560 Query: 111 CLIIGELLQKKLIVVINKIDVYPENQRASKLEKLRLRLAKTLEATTFGGQVP-ICAVSAL 169 E +Q +V+ K D P ++ S + ++ + K + P I SA Sbjct: 222561 YFTWLENVQGTFFIVLTKCDSVPHSRVTSVMRQVYSLITK--HRRKYRKVFPFIIPTSAK 222734 Query: 170 QGTHIAELREVLRE 183 GT++ LR ++ E Sbjct: 222735 DGTNMELLRGLITE 222776 >Cf_Contig1002 | | 1 to 61726 Length = 61726 Score = 29.3 bits (64), Expect = 8.6 Identities = 21/57 (36%), Positives = 29/57 (50%) Frame = +3 Query: 358 ALLQFESPVLSPPHSTLIASKLDMDVHSTSCRLAFWGRIAWQTHSSKYFQEELPKLR 414 ALL +E L PPHS L S +DV S+ LA Q HS++ + P+L+ Sbjct: 11832 ALLCYERSALLPPHSALRFSLHLLDVFSS---LALVSHSVLQLHSAQAILLKAPQLQ 11993 Database: C.fasciculata/genome.fa Posted date: Nov 21, 2011 7:46 PM Number of letters in database: 37,048,325 Number of sequences in database: 1089 Lambda K H 0.320 0.136 0.388 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 19,432,976 Number of Sequences: 1089 Number of extensions: 293289 Number of successful extensions: 1262 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 75 Number of HSP's successfully gapped in prelim test: 33 Number of HSP's that attempted gapping in prelim test: 1084 Number of HSP's gapped (non-prelim): 341 length of query: 511 length of database: 12,349,441 effective HSP length: 106 effective length of query: 405 effective length of database: 12,234,007 effective search space: 4954772835 effective search space used: 4954772835 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 64 (29.3 bits)