TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SPP00000092_1.0 # Protein # Eukaryotic elongation factor (eEFSec) # Drosophila melanogaster # Complete (511 letters) Database: A.laibachii_Nc14/genome.fa 3816 sequences; 32,740,139 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|325181502|emb|FR824062.1| Albugo laibachii Nc14, genomic cont... 113 3e-25 gi|325180465|emb|FR824052.1| Albugo laibachii Nc14, genomic cont... 85 1e-16 gi|325188185|emb|FR824211.1| Albugo laibachii Nc14, genomic cont... 78 1e-14 gi|325184277|emb|FR824101.1| Albugo laibachii Nc14, genomic cont... 66 7e-11 gi|325184111|emb|FR824098.1| Albugo laibachii Nc14, genomic cont... 61 2e-09 gi|325186025|emb|FR824142.1| Albugo laibachii Nc14, genomic cont... 61 2e-09 gi|325190995|emb|FR824346.1| Albugo laibachii Nc14, genomic cont... 61 2e-09 gi|325183031|emb|FR824081.1| Albugo laibachii Nc14, genomic cont... 54 4e-07 gi|325184719|emb|FR824111.1| Albugo laibachii Nc14, genomic cont... 50 3e-06 gi|325179861|emb|FR824048.1| Albugo laibachii Nc14, genomic cont... 47 3e-05 gi|325187591|emb|FR824190.1| Albugo laibachii Nc14, genomic cont... 47 4e-05 gi|325191291|emb|FR824390.1| Albugo laibachii Nc14, genomic cont... 44 4e-04 gi|325186899|emb|FR824168.1| Albugo laibachii Nc14, genomic cont... 39 0.007 gi|325190899|emb|FR824340.1| Albugo laibachii Nc14, genomic cont... 35 0.18 gi|325190975|emb|FR824344.1| Albugo laibachii Nc14, genomic cont... 35 0.18 gi|325183168|emb|FR824083.1| Albugo laibachii Nc14, genomic cont... 31 2.5 gi|325188078|emb|FR824206.1| Albugo laibachii Nc14, genomic cont... 30 5.6 gi|325190171|emb|FR824296.1| Albugo laibachii Nc14, genomic cont... 29 7.4 gi|325194733|emb|FR825540.1| Albugo laibachii Nc14, genomic cont... 29 7.4 >gi|325181502|emb|FR824062.1| Albugo laibachii Nc14, genomic contig CONTIG_17_NC14_v4_199494_229 Length = 199494 Score = 113 bits (283), Expect = 3e-25 Identities = 86/300 (28%), Positives = 141/300 (47%), Gaps = 26/300 (8%) Frame = +3 Query: 6 NIGLLGHVDSGKTTLAKALSSISSTAA---------FDKNPQSVERGITLDLGFSGLLVD 56 NIG +GHVD GKTTL AL+ + S DK P+ RGIT+ Sbjct: 130518 NIGTIGHVDHGKTTLTAALTKVLSEKGGAKFTSYEDIDKAPEERARGITI---------- 130667 Query: 57 APAHLP-QGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIG 115 + AH+ + E+ + VDCPGHA ++ +I GA +D +LVV A G QT E +++ Sbjct: 130668 STAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAGDGPMPQTREHILLA 130847 Query: 116 -ELLQKKLIVVINKIDVYPENQRASKLEKLRLRLAKTLEATTF-GGQVPICAVSALQGTH 173 ++ L+V +NK+D + + LE + + + + L+ F ++PI SAL Sbjct: 130848 RQVGVPALVVFLNKVDQVDDEE---LLELVEMEIRELLDLYDFPSEEIPIIRGSALAAVE 131018 Query: 174 ----------IAELREVLREAYFQPQRNLADPLFMYVDHCFGIKGQGTVCTGTLLQGKVQ 223 + +L E + P R+ P M V+ F I G+GTV +G + G + Sbjct: 131019 GRDHPIGRDAVLQLVEHVDNYIPDPVRDFEKPFLMPVEDVFSIAGRGTVVSGRVEHGVIN 131198 Query: 224 VNNVIELPALGE---QRKVKSIQMFRKNVTSASMGDRIGLCVTQFNAKLLERG-IITQPG 279 + +EL + + ++MF+K + GD +GL + + RG ++ +PG Sbjct: 131199 AGDEVELVGIRSTPTKTTCTGVEMFKKQLDRGQAGDNVGLLLRGLKRDDVMRGQVVCKPG 131378 >gi|325180465|emb|FR824052.1| Albugo laibachii Nc14, genomic contig CONTIG_7_NC14_v4_241751_227 Length = 241751 Score = 85.1 bits (209), Expect = 1e-16 Identities = 75/283 (26%), Positives = 131/283 (46%), Gaps = 38/283 (13%) Frame = +2 Query: 6 NIGLLGHVDSGKTTLAKALSSISSTAAFDKNPQSVERGITLDLGFSG------------- 52 NIG +GHV GK+T+ KA+S + + + +ER IT+ LG++ Sbjct: 139010 NIGTIGHVAHGKSTVVKAISGVQTV----RFKNELERNITIKLGYANAKIYKKENENGIG 139177 Query: 53 -----------LLVDAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIID-LMLLVVDA 100 VD Q +FVDCPGH L+ T++ GA ++D +LLV Sbjct: 139178 CYRAFGSSKPDTFVDEVDQKKWVLQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGN 139357 Query: 101 QKGKQTQTAECLIIGELLQ-KKLIVVINKIDVYPENQRASKLEKLRLRLAKTLEATTFGG 159 + Q QT+E L E+++ + +I++ NK+D+ E+ ++ E++ K A T Sbjct: 139358 EVCPQPQTSEHLAAIEIMRLQNIIILQNKVDLIKEDVAVAQHEQI-----KKFVAGTVAH 139522 Query: 160 QVPICAVSALQGTHIAELREVLREAYFQPQRNLADPLFMYVDHCFGIKG--------QGT 211 PI +SA+ +I + E + P+R+ + V F + +G Sbjct: 139523 DAPIIPISAVLKYNIDVVCEYIVRNIPIPKRDFTSKPKLIVIRSFDVNKPGEDVENLKGG 139702 Query: 212 VCTGTLLQGKVQVNNVIE----LPALGEQRKVKSIQMFRKNVT 250 V G++LQG ++VN+ IE + + + KV + +F + V+ Sbjct: 139703 VAGGSILQGVLRVNDEIEVRPGIVSKNDDGKVTCVPIFSRIVS 139831 >gi|325188185|emb|FR824211.1| Albugo laibachii Nc14, genomic contig CONTIG_166_NC14_v4_56190_229 Length = 56190 Score = 78.2 bits (191), Expect = 1e-14 Identities = 80/319 (25%), Positives = 131/319 (41%), Gaps = 47/319 (14%) Frame = +3 Query: 4 NFNIGLLGHVDSGKTTLAKAL------------------------SSISSTAAFDKNPQS 39 + ++ ++GHVD+GK+T L SS DK Sbjct: 3402 HISLVVIGHVDAGKSTTTGHLIYKCGGIDKRTIEKFEKEAAQLNKSSFKYAWVVDKLKAE 3581 Query: 40 VERGITLDLGFSGLLVDAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVD 99 ERGIT+D+ +G FT +D PGH I+ +I G D +L + Sbjct: 3582 RERGITIDIALWKF---------EGCCHSFTVIDAPGHRDFIKNMITGTSQADASILCIA 3734 Query: 100 AQKG-------KQTQTAE-CLIIGELLQKKLIVVINKIDVYPENQRASKLEKLRLRLAKT 151 + G K+ QT E L+ L K+++V +NK+D S+ +++ + Sbjct: 3735 SGVGEFEAGISKEGQTREHALLAFTLGVKQMVVAVNKMDDASVKYSQSRFDEIVTEVGTY 3914 Query: 152 LEATTFGGQVPICA---VSALQGTHIAE------------LREVLREAYFQPQRNLADPL 196 L T G + C +S G ++ E L E L + P+R PL Sbjct: 3915 L--TKIGYKANKCTMIPISGWCGDNMIEKSSNMPWYKGPTLLEAL-DKLVPPKRPTDKPL 4085 Query: 197 FMYVDHCFGIKGQGTVCTGTLLQGKVQVNNVIELPALGEQRKVKSIQMFRKNVTSASMGD 256 + + + I G GTV G + G ++ V+ +G +VKS++M +++T A+ GD Sbjct: 4086 RLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPVGLTTEVKSVEMHHESLTEATPGD 4265 Query: 257 RIGLCVTQFNAKLLERGII 275 +G V K L RG + Sbjct: 4266 NVGFNVKNVAVKDLRRGFV 4322 Score = 65.1 bits (157), Expect = 1e-10 Identities = 51/165 (30%), Positives = 79/165 (47%), Gaps = 3/165 (1%) Frame = -1 Query: 7 IGLLGHVDSGKTTLAKALSSISSTAAFDKNPQSVERGITLDLGFSGLLVDAPAHLPQGEQ 66 I ++GHVD GKTTL +L S A+ ++ GIT + A L G Sbjct: 7455 IAVMGHVDHGKTTLMDSLREHSFIASSERE------GITQKINV------CEASLEDG-- 7318 Query: 67 LQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGELLQKKLIVVI 126 ++ TF+D PGH R AQ+ D++LLVV +G QT E + E + +V I Sbjct: 7317 IKATFLDTPGHFHFFRMRTSAAQVADIILLVVAVDEGCLLQTEESIGCIEEMNIPSVVCI 7138 Query: 127 NKIDVYPENQRASKLEKLRL---RLAKTLEATTFGGQVPICAVSA 168 NK+DV+ N + E+ + R+ + L++ P+ +SA Sbjct: 7137 NKMDVFASNGDDHEQEQSKSVVDRVTQQLKSFVALQDTPVIPISA 7003 >gi|325184277|emb|FR824101.1| Albugo laibachii Nc14, genomic contig CONTIG_56_NC14_v4_108009_226 Length = 108009 Score = 65.9 bits (159), Expect = 7e-11 Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 1/174 (0%) Frame = +1 Query: 9 LLGHVDSGKTTLAKALSSISSTAAFDKNPQSVERGITLDLGFSGLLVDAPAHLPQGEQLQ 68 ++GHVD GKTTL L + TA S GIT +G + + GEQ Sbjct: 84067 VMGHVDHGKTTLLDTLRKSNVTA-------SEYGGITQKIGAFSVNLGKSF----GEQST 84213 Query: 69 FTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGELLQKKLIVVINK 128 TF+D PGH+ G + D++LL+V A G Q+QT E + +IV I K Sbjct: 84214 MTFLDTPGHSVFSGMRSRGVEATDMILLIVAADDGIQSQTIEVVEQAVKNGICMIVAITK 84393 Query: 129 IDVYPENQRASKLEKLRLRLAK-TLEATTFGGQVPICAVSALQGTHIAELREVL 181 D++ +++ + ++++ +L K + GG P+ VS G + L+E + Sbjct: 84394 CDMHGSDEQEA-VQRISAQLMKYGVTTENLGGDTPVICVSGKTGDGLDLLKETI 84552 >gi|325184111|emb|FR824098.1| Albugo laibachii Nc14, genomic contig CONTIG_53_NC14_v4_112287_155 Length = 112287 Score = 60.8 bits (146), Expect = 2e-09 Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 32/159 (20%) Frame = +3 Query: 4 NFNIGLLGHVDSGKTTL----------------------AKALSSISSTAAF--DKNPQS 39 + N+ L+GHVD+GK+TL AKA S S +F D + Sbjct: 13503 HLNVVLIGHVDAGKSTLSGNILYLMGMVDKRTIERYEKEAKARSRESWFLSFIMDTGEEE 13682 Query: 40 VERGITLDLGFSGLLVDAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVD 99 E+G T+++G AH + E ++T +D PGH + + +I GA D+ +LV+ Sbjct: 13683 REKGKTIEVG--------RAHF-ETENRRYTILDAPGHKTYVPNMIQGASQADIGILVIS 13835 Query: 100 AQKG-------KQTQTAECLIIGELLQ-KKLIVVINKID 130 A+KG + QT E ++ + L KL+VVINK+D Sbjct: 13836 ARKGEFETGFERGGQTREHALLAKTLGINKLVVVINKMD 13952 >gi|325186025|emb|FR824142.1| Albugo laibachii Nc14, genomic contig CONTIG_97_NC14_v4_80307_117 Length = 80307 Score = 60.8 bits (146), Expect = 2e-09 Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 32/159 (20%) Frame = +1 Query: 4 NFNIGLLGHVDSGKTTL----------------------AKALSSISSTAAF--DKNPQS 39 + N+ L+GHVD+GK+TL AKA S S +F D + Sbjct: 13285 HLNVVLIGHVDAGKSTLSGNILYLMGMVDKRTIERYEKEAKARSRESWFLSFIMDTGEEE 13464 Query: 40 VERGITLDLGFSGLLVDAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVD 99 E+G T+++G AH + E ++T +D PGH + + +I GA D+ +LV+ Sbjct: 13465 REKGKTIEVG--------RAHF-ETENRRYTILDAPGHKTYVPNMIQGASQADIGILVIS 13617 Query: 100 AQKG-------KQTQTAECLIIGELLQ-KKLIVVINKID 130 A+KG + QT E ++ + L KL+VVINK+D Sbjct: 13618 ARKGEFETGFERGGQTREHALLAKTLGINKLVVVINKMD 13734 >gi|325190995|emb|FR824346.1| Albugo laibachii Nc14, genomic contig CONTIG_301_NC14_v4_31381_247 Length = 31381 Score = 60.8 bits (146), Expect = 2e-09 Identities = 60/203 (29%), Positives = 93/203 (45%), Gaps = 8/203 (3%) Frame = -3 Query: 6 NIGLLGHVDSGKTTLAKAL-----SSISSTAAFDKNPQSVERGITLDLGFSGLLVDAPAH 60 N+ ++ HVD GKTTL L + + A D ERGIT+ + ++ H Sbjct: 2870 NLAIVAHVDHGKTTLVDQLLKQGGNMVLEERAMDSIELERERGITIMSKCTR--IEYEGH 2697 Query: 61 LPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGELLQK 120 + VD PGHA + ++D ++LVVDA +G +QT ++ + LQ+ Sbjct: 2696 V-------LNIVDTPGHADFGGEVERILSMVDGVVLVVDATEGPMSQTK--FVLTKALQR 2544 Query: 121 --KLIVVINKIDVYPENQRAS-KLEKLRLRLAKTLEATTFGGQVPICAVSALQGTHIAEL 177 K +VVINK+D E R + +E + LEA + PI SA QG + E+ Sbjct: 2543 GLKPLVVINKVD--RETSRLNGDVENELFDMFMALEANDEQLEFPIIYASARQGWAVREV 2370 Query: 178 REVLREAYFQPQRNLADPLFMYV 200 E + + + L D + YV Sbjct: 2369 DETKEKR--ESMKVLLDEIIAYV 2307 >gi|325183031|emb|FR824081.1| Albugo laibachii Nc14, genomic contig CONTIG_36_NC14_v4_137019_239 Length = 137019 Score = 53.5 bits (127), Expect = 4e-07 Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 9/131 (6%) Frame = +2 Query: 9 LLGHVDSGKTTLAKALSSISSTAAFDKNPQSVERGITLDLGFSGLLVDA----PAHLPQG 64 ++GHVD+GKT K L +I T D GIT +G + V+A L + Sbjct: 44357 IMGHVDTGKT---KLLDNIRRTKVQDGEAG----GITQQIGATFFPVEAIKQRTERLAKT 44515 Query: 65 EQLQFTF-----VDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGELLQ 119 +L++ +D PGH S G + D+ +LVVD G + QT E L + + Sbjct: 44516 MKLEYRLPGLLVIDTPGHESFTNLRSRGTSLCDIAILVVDIMHGLEPQTLESLRLLRQKK 44695 Query: 120 KKLIVVINKID 130 IV +NKID Sbjct: 44696 APFIVALNKID 44728 >gi|325184719|emb|FR824111.1| Albugo laibachii Nc14, genomic contig CONTIG_66_NC14_v4_99192_244 Length = 99192 Score = 50.4 bits (119), Expect = 3e-06 Identities = 58/231 (25%), Positives = 91/231 (39%), Gaps = 51/231 (22%) Frame = +3 Query: 3 INFNIGLLGHVDSGKTTLAKAL------------------SSISSTAAF------DKNPQ 38 + N+ ++GHVD+GK+T+ L S I+ ++F D + + Sbjct: 31392 VRINLIVIGHVDAGKSTIMGHLLFQLGYVSPKLMHKYEKESKIAGKSSFKYAWVTDADQE 31571 Query: 39 SVE-------------------RGITLDLGFSGLLVDAPAHLPQGEQLQFTFVDCPGHAS 79 V RG+T+D+G + T +D PGH Sbjct: 31572 EVSLPHHLMPSFPHSNRT**RARGVTMDIGLKFFETASKC---------VTLLDAPGHKD 31724 Query: 80 LIRTIIGGAQIIDLMLLVVDAQKG-------KQTQTAE-CLIIGELLQKKLIVVINKIDV 131 I +I GA D+ LLVV A G QT E L+I L ++IV INK+D Sbjct: 31725 FIPKMITGATQADVALLVVPASTGAFEGAFENSGQTKEHTLLIKSLGVTQIIVAINKMDT 31904 Query: 132 YPENQRASKLEKLRLRLAKTLEATTFGGQVPICAVSALQGTHIAELREVLR 182 + + + + L L+ F + VS + GT+++ L EV R Sbjct: 31905 IAWD--PIRYQSIVDSLKTYLQRVGFRKHISFVPVSGILGTNLSALSEVSR 32051 >gi|325179861|emb|FR824048.1| Albugo laibachii Nc14, genomic contig CONTIG_3_NC14_v4_366484_228 Length = 366484 Score = 47.4 bits (111), Expect = 3e-05 Identities = 36/136 (26%), Positives = 52/136 (38%), Gaps = 11/136 (8%) Frame = -3 Query: 6 NIGLLGHVDSGKTTLAKALSSISST-----------AAFDKNPQSVERGITLDLGFSGLL 54 NIG+L H+D+GKTT + + S D PQ +RGIT Sbjct: 171731 NIGILAHIDAGKTTTTERMLFYSGVIHKMGEVHDGDTTMDYMPQERQRGIT--------- 171579 Query: 55 VDAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLII 114 + A A +D PGH + +++D + V+D G + QT Sbjct: 171578 IGAAAISFPWRSTNVNVIDTPGHVDFTVEVERAVRVLDGSIAVIDGVAGVEAQTETVWEQ 171399 Query: 115 GELLQKKLIVVINKID 130 IV INK+D Sbjct: 171398 ANRYAVPRIVFINKMD 171351 >gi|325187591|emb|FR824190.1| Albugo laibachii Nc14, genomic contig CONTIG_145_NC14_v4_62925_230 Length = 62925 Score = 46.6 bits (109), Expect = 4e-05 Identities = 47/196 (23%), Positives = 85/196 (43%), Gaps = 18/196 (9%) Frame = +2 Query: 6 NIGLLGHVDSGKTTLAKAL----SSISST----------AAFDKNPQSVERGITLDLGFS 51 NIG+ H+DSGKTTL + + I+S A D E+GIT Sbjct: 19202 NIGISAHIDSGKTTLTERILYYTGKINSIHDVRGKDGVGAKMDSMELEREKGIT------ 19363 Query: 52 GLLVDAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAEC 111 + + A Q ++ +D PGH + +++D +LV+ G Q+Q+ Sbjct: 19364 ---IQSAATFCQWKENHINIIDTPGHVDFTIEVERALRVLDGGILVLCGVSGVQSQS--- 19525 Query: 112 LIIGELLQK---KLIVVINKIDVYPENQRASKLEKLRLRLAKTLEATTFGGQVPICAVSA 168 L + + +++ I INK+D + + ++K+ L L+ Q+PI + Sbjct: 19526 LTVDKQMKRYGVPRIAFINKLD-----RMGANVDKVISDLRTQLKLNACALQIPIGIEHS 19690 Query: 169 LQG-THIAELREVLRE 183 L+G + E++ + E Sbjct: 19691 LEGIIDLVEMKAIRNE 19738 >gi|325191291|emb|FR824390.1| Albugo laibachii Nc14, genomic contig CONTIG_345_NC14_v4_25966_356 Length = 25966 Score = 43.5 bits (101), Expect = 4e-04 Identities = 42/152 (27%), Positives = 62/152 (40%), Gaps = 27/152 (17%) Frame = +3 Query: 6 NIGLLGHVDSGKTTLAKALSS--------------------------ISSTAAF-DKNPQ 38 NI +L HVD GKT+L+ +L + IS F D + Sbjct: 20553 NICILAHVDHGKTSLSDSLIASNGLISDKLAGKVSIALWLMRIML**ISRQIRFLDDTKE 20732 Query: 39 SVERGITLDLGFSGLLVDAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVV 98 RGIT+ L+ +A + + E VD PGH + +I D L+++ Sbjct: 20733 EQLRGITMKSSVISLVYEAAKGIER-ESYLINLVDSPGHVDFSFDVSTAVRICDGALVLI 20909 Query: 99 DAQKGKQTQTAECLIIGELLQKKLIVVINKID 130 DA +G QT L + + +VINKID Sbjct: 20910 DAVEGFCPQTHAVLRQAWIEGTRPCLVINKID 21005 >gi|325186899|emb|FR824168.1| Albugo laibachii Nc14, genomic contig CONTIG_123_NC14_v4_71167_256 Length = 71167 Score = 39.3 bits (90), Expect = 0.007 Identities = 33/136 (24%), Positives = 52/136 (38%), Gaps = 5/136 (3%) Frame = +3 Query: 6 NIGLLGHVDSGKTTLAKALSSISSTAAFDKNPQSVERGITLD-----LGFSGLLVDAPAH 60 NI ++G + GKT L + +D + I D + V Sbjct: 44496 NIAIVGDLHHGKTLFMDLLIQQTHLKKWDPEKEKRYTDIRKDEQERKISIKSTPVSLVLP 44675 Query: 61 LPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGELLQK 120 +G+ +DCPGH + I QI D +LVVDA +G I+ ++ + Sbjct: 44676 TSKGKHYLINAMDCPGHVNFKDESIAALQIADGAILVVDAIEGVLMNVRVYQIVFNMI*R 44855 Query: 121 KLIVVINKIDVYPENQ 136 V N + PE+Q Sbjct: 44856 TCCVDRNDDKMRPESQ 44903 >gi|325190899|emb|FR824340.1| Albugo laibachii Nc14, genomic contig CONTIG_295_NC14_v4_31828_130 Length = 31828 Score = 34.7 bits (78), Expect = 0.18 Identities = 37/161 (22%), Positives = 63/161 (39%), Gaps = 36/161 (22%) Frame = +3 Query: 6 NIGLLGHVDSGKTTLAKALSS----ISSTAA-----FDKNPQSVERGITLDLGFSGLLVD 56 N+ ++ HVD GK+TL +L S IS+ A D +R IT+ +G+ + Sbjct: 4218 NMSVIAHVDHGKSTLTDSLVSKAGIISAKHAGEARFTDTRQDEQDRCITIKS--TGISMF 4391 Query: 57 APAHLPQGEQLQ---------------------------FTFVDCPGHASLIRTIIGGAQ 89 ++ GE+ +D PGH + + Sbjct: 4392 FEYNMDVGEKATAAKVANESVVAAKTDSETVEISQNSYLINLIDSPGHVDFSSEVTAALR 4571 Query: 90 IIDLMLLVVDAQKGKQTQTAECLIIGELLQKKLIVVINKID 130 + D L+VVD +G QT L + K ++++NK+D Sbjct: 4572 VTDGALVVVDCIEGVCVQTETVLRQAISERVKPVLMVNKVD 4694 >gi|325190975|emb|FR824344.1| Albugo laibachii Nc14, genomic contig CONTIG_299_NC14_v4_31534_143 Length = 31534 Score = 34.7 bits (78), Expect = 0.18 Identities = 37/161 (22%), Positives = 63/161 (39%), Gaps = 36/161 (22%) Frame = +1 Query: 6 NIGLLGHVDSGKTTLAKALSS----ISSTAA-----FDKNPQSVERGITLDLGFSGLLVD 56 N+ ++ HVD GK+TL +L S IS+ A D +R IT+ +G+ + Sbjct: 2113 NMSVIAHVDHGKSTLTDSLVSKAGIISAKHAGEARFTDTRQDEQDRCITIKS--TGISMF 2286 Query: 57 APAHLPQGEQLQ---------------------------FTFVDCPGHASLIRTIIGGAQ 89 ++ GE+ +D PGH + + Sbjct: 2287 FEYNMDVGEKATAAKVANESVVAAKTDSETVEISQNSYLINLIDSPGHVDFSSEVTAALR 2466 Query: 90 IIDLMLLVVDAQKGKQTQTAECLIIGELLQKKLIVVINKID 130 + D L+VVD +G QT L + K ++++NK+D Sbjct: 2467 VTDGALVVVDCIEGVCVQTETVLRQAISERVKPVLMVNKVD 2589 >gi|325183168|emb|FR824083.1| Albugo laibachii Nc14, genomic contig CONTIG_38_NC14_v4_136441_241 Length = 136441 Score = 30.8 bits (68), Expect = 2.5 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Frame = -3 Query: 381 MDVHSTSCRLAFWGRIAWQTH-SSKYFQEELPKLRIFKRKQKVGSIQRVVNSSEVIV 436 +DVHS S R+ WQT + F E+ ++I R Q SI +N S +++ Sbjct: 70217 IDVHS*SLEA*MRNRVRWQTSVDT*QFYHEITDIKIDFRSQSTQSIA*YINQSNILI 70047 >gi|325188078|emb|FR824206.1| Albugo laibachii Nc14, genomic contig CONTIG_161_NC14_v4_57741_228 Length = 57741 Score = 29.6 bits (65), Expect = 5.6 Identities = 15/49 (30%), Positives = 26/49 (53%) Frame = -2 Query: 70 TFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGELL 118 TFV CP HA + ++ A I L+L + A+ + T +++ +LL Sbjct: 27095 TFVTCPVHAIAVALLMQSAPCISLLLHLTTAKDVAELATTASILLLKLL 26949 >gi|325190171|emb|FR824296.1| Albugo laibachii Nc14, genomic contig CONTIG_251_NC14_v4_37927_235 Length = 37927 Score = 29.3 bits (64), Expect = 7.4 Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 2/58 (3%) Frame = +2 Query: 431 SSEVIVQN--LFKDAKRDLYVGKNVELSTGEKGRIERTFGQTSKVAITFQDALSPETI 486 ++EVI++ L + RDLY+ +++ ++T GR + + S+ A+ SPE I Sbjct: 35930 TAEVILRTRLLASTSDRDLYMRQSISINTSSCGRFRTLYQRYSQKALPRPCTRSPENI 36103 >gi|325194733|emb|FR825540.1| Albugo laibachii Nc14, genomic contig CONTIG_2442_NC14_v4_788_57 Length = 788 Score = 29.3 bits (64), Expect = 7.4 Identities = 21/60 (35%), Positives = 27/60 (45%) Frame = +2 Query: 122 LIVVINKIDVYPENQRASKLEKLRLRLAKTLEATTFGGQVPICAVSALQGTHIAELREVL 181 LIV +NKID A L LA+ + A FGG VSA GT + L + + Sbjct: 23 LIVAVNKID----KAGADPLRVKNELLAENVVAEDFGGDTQFIEVSAKVGTGVDTLLDAI 190 Database: A.laibachii_Nc14/genome.fa Posted date: Nov 21, 2011 7:46 PM Number of letters in database: 32,740,139 Number of sequences in database: 3816 Lambda K H 0.320 0.136 0.388 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 15,825,053 Number of Sequences: 3816 Number of extensions: 221877 Number of successful extensions: 1026 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 238 Number of HSP's successfully gapped in prelim test: 56 Number of HSP's that attempted gapping in prelim test: 669 Number of HSP's gapped (non-prelim): 558 length of query: 511 length of database: 10,913,379 effective HSP length: 105 effective length of query: 406 effective length of database: 10,512,699 effective search space: 4268155794 effective search space used: 4268155794 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 63 (28.9 bits)