TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SPP00000085_1.0 # Protein # Eukaryotic elongation factor (eEFSec) # Caenorhabditis elegans # Complete (500 letters) Database: T.congolense/genome.fa 11 sequences; 22,287,946 total letters Searching...........done Score E Sequences producing significant alignments: (bits) Value T.congo.pschr4 123 2e-28 TcIL3000_10_v2.embl 87 3e-17 T.congo.pschr2 64 2e-10 T.congo.pschr.11 55 9e-08 T.congo.pschr.7 49 6e-06 T.congo.pschr.8 45 1e-04 T.congo.pschr.3. 41 0.002 T.congo.pschr.9 31 1.8 >T.congo.pschr4 Length = 1343510 Score = 123 bits (309), Expect = 2e-28 Identities = 102/371 (27%), Positives = 163/371 (43%), Gaps = 55/371 (14%) Frame = -3 Query: 14 LNLGILGHVDSGKTTLTRRIAELGSTSAFDAHATSTTTDGIRRNTLDLGFS-TMTSLSGR 72 +N+GILGHVDSGKT+L + ++ ST+AFD S R TLDLGFS T S Sbjct: 360063 INIGILGHVDSGKTSLAKALSLTASTAAFDKSPESQR----RGITLDLGFSATCVSTESA 359896 Query: 73 RLAL------------IDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEHLLLA 120 AL +DCPGH+ LIR VL + + D+ I++ID G+Q QTAE +++ Sbjct: 359895 APALFALGLKHVQCTFVDCPGHASLIRTVLGGAQIIDVIILVIDACKGVQTQTAECIVI- 359719 Query: 121 SKFCPNRVIIVLNKCDL---XXXXXXXXXXXXVRKGLKSMGVDENSP---IVEMSLADGY 174 + +++V+NK D +R+ L+ P +VE+S A Sbjct: 359718 GEVLNKPLVVVINKIDAVQGLTQAEQRANLDKLRRRLRKTFERTRWPHVSMVEVSAAPRG 359539 Query: 175 FKEE----------------MLQNLKLAIESRIFEPKRDEE---GEFLIAIDHCFAIKGQ 215 E +L ++ + +RD + + ++ +DHCFA+KGQ Sbjct: 359538 GSAEGDAAVGGHCVPINVDGVLPAALRLVDVEAMKRQRDAQHRPEDLVMMVDHCFALKGQ 359359 Query: 216 GTVLTGTVIRGVLRLNTEIEFPALNEKRRVKTLETWKXXXXXXXXXXXXXFLVAPSFDEH 275 GTV TGT++RG + + I P ++VK L+ ++ V FD Sbjct: 359358 GTVFTGTILRGKVSVGDSILIPESQVVKKVKGLQVFRKPVQCAGQGDRVGLSVV-QFDAD 359182 Query: 276 RFSR-CICGPL----------------GTLKSTKFVLATVEPIQFFRKSINSKSKIHVAV 318 R +C + +S ++A V ++F + + +K H+ + Sbjct: 359181 GMERGLLCSAVQQHHQRHRSSQQGATSSAFESVSTLIAEVSRVRFHQLACTIHTKFHITI 359002 Query: 319 AFETVMAECQF 329 TVM +F Sbjct: 359001 GHSTVMGSMRF 358969 >TcIL3000_10_v2.embl Length = 3612457 Score = 86.7 bits (213), Expect = 3e-17 Identities = 66/243 (27%), Positives = 107/243 (44%), Gaps = 13/243 (5%) Frame = -1 Query: 14 LNLGILGHVDSGKTTLTRRI----AELGSTSAFDAHATSTTTDGIRRNTLDLGFSTMTSL 69 L +G +GHVD GKTTLT I A+ G A D A + + R Sbjct: 2929450 LIIGTIGHVDHGKTTLTSAITTVLAKAGKAQALDYFAIDKSPEEKSRKITINATHVEYES 2929271 Query: 70 SGRRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEHLLLASKFCPNRVI 129 R IDCPGH ++ ++ + D I+++ G PQT EHLL+ S+ ++ Sbjct: 2929270 EKRHYGHIDCPGHMDFVKNMITGAAQMDGGILVVAANDGCMPQTREHLLICSQIGLPALV 2929091 Query: 130 IVLNKCDL--XXXXXXXXXXXXVRKGLKSMGVD-ENSPIVEMS----LADGYFKEEMLQN 182 +NKCD+ +R+ L+ E +P+V S L E + Sbjct: 2929090 GFINKCDMMQGQEDMIELVEMELRELLEKYKFPAEETPLVRGSAVKALEGDADSEAKIME 2928911 Query: 183 LKLAIESRIFEPKRDEEGEFLIAIDHCFAI--KGQGTVLTGTVIRGVLRLNTEIEFPALN 240 L + I +P R E FL+ I+H + I + ++TG V +G++++N + E + Sbjct: 2928910 LIAKCDEWIPDPPRATEKPFLMPIEHVYEIGKDKKSVIVTGRVDQGLMKINADAELSGFS 2928731 Query: 241 EKR 243 K+ Sbjct: 2928730 AKK 2928722 Score = 53.5 bits (127), Expect = 3e-07 Identities = 65/275 (23%), Positives = 103/275 (37%), Gaps = 39/275 (14%) Frame = +1 Query: 14 LNLGILGHVDSGKTTLT-------------------RRIAELGSTSAFDAHATSTTTDGI 54 +NL ++GHVD+GK+T T + A++G S A Sbjct: 464146 MNLVVVGHVDAGKSTATGHLIYKCGGIDKRTIEKFEKEAADIGKASFKYAWVLDKLKAER 464325 Query: 55 RRN-TLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAG 108 R T+D+ S +ID PGH I+ ++ ++ D AI+II + AG Sbjct: 464326 ERGITIDIALWKFESPKSV-FTIIDAPGHRDFIKNMITGTSQADAAILIIASAQGEFEAG 464502 Query: 109 IQP--QTAEHLLLASKFCPNRVIIVLNKCDLXXXXXXXXXXXXVRKGLKS--MGVDENSP 164 I QT EH LLA ++++ NK D + K + + V N Sbjct: 464503 ISKDGQTREHALLAFTLGVKQMVVCCNKMDDKTVNYGQERYDEIVKEVSAYIKKVGYNVE 464682 Query: 165 IVEMSLADGYFKEEMLQN----------LKLAIESRIFEPKRDEEGEFLIAIDHCFAIKG 214 V G+ + M+ L + P R + + + + I G Sbjct: 464683 KVRFVPISGWQGDNMIDKSDKMPWYKGPTLLEALDMLEPPVRPSDKPLRLPLQDVYKIGG 464862 Query: 215 QGTVLTGTVIRGVLRLNTEIEFPALNEKRRVKTLE 249 GTV G V GV++ + F N VK++E Sbjct: 464863 IGTVPVGRVETGVMKPGDVVTFAPANVTTEVKSIE 464967 Score = 46.2 bits (108), Expect = 4e-05 Identities = 37/110 (33%), Positives = 52/110 (47%), Gaps = 11/110 (10%) Frame = +1 Query: 15 NLGILGHVDSGKTTLTRRIAELGSTSAFD-AHATSTTTD-GIRRNTLDL---------GF 63 N+GI H+DSGKTT+T RI L T D H T+ G ++++L Sbjct: 1080697 NVGISAHIDSGKTTVTERI--LFYTGRIDKIHEVKGGTEVGATMDSMELEKERGITIRSA 1080870 Query: 64 STMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQT 113 +T + +ID PGH V A V D AI+++ V G+Q QT Sbjct: 1080871 ATQCKWGEHLINIIDTPGHVDFTIEVERALRVLDGAIMLMCGVGGVQSQT 1081020 Score = 45.8 bits (107), Expect = 5e-05 Identities = 47/193 (24%), Positives = 75/193 (38%), Gaps = 19/193 (9%) Frame = +2 Query: 76 LIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQP--QTAEHLLLASKFCPNRV 128 +ID PGH I+ ++ ++ D AI+II + AGI QT EH LLA ++ Sbjct: 461999 IIDAPGHRDFIKNMITGTSQADAAILIIASAQGEFEAGISKDGQTREHALLAFTLGVKQM 462178 Query: 129 IIVLNKCDLXXXXXXXXXXXXVRKGLKS--MGVDENSPIVEMSLADGYFKEEMLQN---- 182 ++ NK D + K + + V N V G+ + M+ Sbjct: 462179 VVCCNKMDDKTVNYGQERYDEIVKEVSAYIKKVGYNVEKVRFVPISGWQGDNMIDKSDKM 462358 Query: 183 ------LKLAIESRIFEPKRDEEGEFLIAIDHCFAIKGQGTVLTGTVIRGVLRLNTEIEF 236 L + P R + + + + I G GTV G V GV++ + F Sbjct: 462359 PWYKGPTLLEALDMLEPPVRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVMKPGDVVTF 462538 Query: 237 PALNEKRRVKTLE 249 N VK++E Sbjct: 462539 APANVTTEVKSIE 462577 Score = 43.9 bits (102), Expect = 2e-04 Identities = 40/140 (28%), Positives = 60/140 (42%), Gaps = 18/140 (12%) Frame = -3 Query: 15 NLGILGHVDSGKTTLTRRIAELGST----SAFDAHATSTTTDGIRRN------TLDLGFS 64 N+ ++ HVD GK+TL+ + A D T D I R + + + Sbjct: 1011248 NMSVIAHVDHGKSTLSDSLVGAAGIIKMEDAGDKRIMDTRADEIARGITIKSTAISMHYH 1011069 Query: 65 TMTSL-----SGRR---LALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEH 116 + RR + LID PGH V AA V D A+V++D V G+ QT E Sbjct: 1011068 VPPEIISDLPDDRRDFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVEGVCVQT-ET 1010892 Query: 117 LLLASKFCPNRVIIVLNKCD 136 +L + R ++ +NK D Sbjct: 1010891 VLRQALTERIRPVVFINKVD 1010832 Score = 43.9 bits (102), Expect = 2e-04 Identities = 40/140 (28%), Positives = 60/140 (42%), Gaps = 18/140 (12%) Frame = -2 Query: 15 NLGILGHVDSGKTTLTRRIAELGST----SAFDAHATSTTTDGIRRN------TLDLGFS 64 N+ ++ HVD GK+TL+ + A D T D I R + + + Sbjct: 1009101 NMSVIAHVDHGKSTLSDSLVGAAGIIKMEDAGDKRIMDTRADEIARGITIKSTAISMHYH 1008922 Query: 65 TMTSL-----SGRR---LALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEH 116 + RR + LID PGH V AA V D A+V++D V G+ QT E Sbjct: 1008921 VPPEIISDLPDDRRDFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVEGVCVQT-ET 1008745 Query: 117 LLLASKFCPNRVIIVLNKCD 136 +L + R ++ +NK D Sbjct: 1008744 VLRQALTERIRPVVFINKVD 1008685 Score = 29.6 bits (65), Expect = 3.9 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = +1 Query: 372 RLEQQPGSGCRFAFSGIFSQILPENGKNLPPRFTR 406 R+E+QP + C SG LP +N+PP TR Sbjct: 890686 RMERQPNTNCALKASGTKHIPLPPPDRNVPPITTR 890790 >T.congo.pschr2 Length = 799489 Score = 63.5 bits (153), Expect = 2e-10 Identities = 45/127 (35%), Positives = 65/127 (51%), Gaps = 8/127 (6%) Frame = -1 Query: 18 ILGHVDSGKTTLTRRI-------AELGSTSAFDAHATSTTTDGIRRNTLDLGFSTMTSLS 70 +LGHVD+GKT+L RI E G + AT + + T +L L+ Sbjct: 353200 VLGHVDTGKTSLLDRIRATNVQGGEAGGITQ-QIGATFFPRESLFEATQELNKKYKHELN 353024 Query: 71 GRRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEHL-LLASKFCPNRVI 129 L +ID PGH S++ D+AI++ID++ G++PQT E + LL + CP I Sbjct: 353023 VPGLLVIDTPGHESFTNLRSRGSSLCDIAILVIDIMHGLEPQTRESIRLLRERRCP--FI 352850 Query: 130 IVLNKCD 136 I LNK D Sbjct: 352849 IALNKVD 352829 Score = 48.9 bits (115), Expect = 6e-06 Identities = 51/191 (26%), Positives = 75/191 (39%), Gaps = 26/191 (13%) Frame = -3 Query: 70 SGRRLALIDCPGHSGLIRAVLAAST--VFDMAIVIIDVVAGIQPQTAEH--LLLASKFCP 125 S + L L D GH ++ + T V D A ++I GIQ T EH L LA K Sbjct: 323180 SSKVLTLYDLAGHERYLKTTVLGMTRSVPDYACIVISANNGIQRMTKEHVALCLALKI-- 323007 Query: 126 NRVIIVLNKCDLXXXXXXXXXXXXVRKGLKSMGV----------------------DENS 163 +VL + D + K LK+ V D + Sbjct: 323006 -PFFVVLTRIDSTPENIRRETVTNIHKLLKTQTVRKLPYPVQRMDDVVLSAKNLRNDRIT 322830 Query: 164 PIVEMSLADGYFKEEMLQNLKLAIESRIFEPKRDEEGEFLIAIDHCFAIKGQGTVLTGTV 223 PI E+S G + +L+ L L + + RD E + ID F + G GTV+ G V Sbjct: 322829 PIFEVSNVSGVGLQPLLRFLNLLPMRKNWRSARDLPRE--MVIDSTFFVAGVGTVVGGIV 322656 Query: 224 IRGVLRLNTEI 234 +G+ +N + Sbjct: 322655 TQGIFHVNDTV 322623 Score = 28.9 bits (63), Expect = 6.7 Identities = 25/89 (28%), Positives = 37/89 (41%) Frame = -1 Query: 18 ILGHVDSGKTTLTRRIAELGSTSAFDAHATSTTTDGIRRNTLDLGFSTMTSLSGRRLALI 77 ++G SGKTTL ++ G A + D + D S+ S + LI Sbjct: 404800 LVGMAGSGKTTLFAQLVA-GKRVAVRTSMEANRGDVKASGSTDNADSSQVSTG---VTLI 404633 Query: 78 DCPGHSGLIRAVLAASTVFDMAIVIIDVV 106 D PGH L ++L A I ++D V Sbjct: 404632 DFPGHRRLRESLLEAVEEVKKVIFVVDSV 404546 >T.congo.pschr.11 Length = 4797796 Score = 55.1 bits (131), Expect = 9e-08 Identities = 40/128 (31%), Positives = 59/128 (46%), Gaps = 6/128 (4%) Frame = +2 Query: 15 NLGILGHVDSGKTTLTRRIAEL-GSTSAFDAHATSTTTDGIRRNTLDLGFSTMTSLSG-- 71 N+GI+ H+D+GKTT T R+ G+ + TTT + +D G + ++ Sbjct: 2562893 NIGIVAHIDAGKTTTTERMLYYAGAVGRVGDVDSGTTTTDFMKEEVDRGITIQSAAVSFK 2563072 Query: 72 ---RRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEHLLLASKFCPNRV 128 + LID PGH + A V D + + D AG+Q Q+ L + KF V Sbjct: 2563073 WREHNIHLIDTPGHVDFTVELERAMRVVDGVVALFDASAGVQAQSYTVLQQSKKF-DVPV 2563249 Query: 129 IIVLNKCD 136 I LNK D Sbjct: 2563250 IGFLNKMD 2563273 Score = 54.7 bits (130), Expect = 1e-07 Identities = 62/266 (23%), Positives = 107/266 (40%), Gaps = 44/266 (16%) Frame = -1 Query: 14 LNLGILGHVDSGKTTLTRRIAELGSTSAFDAHATSTTTDGIRRNTLDLGFSTM-TSLSG- 71 +N+G +GHV GK+T+ + ++ + T + A + T+ LG++ L G Sbjct: 3748702 INIGTIGHVAHGKSTVVKALSGV-KTQKYHREA-------VMNITIHLGYANAKVFLCGS 3748547 Query: 72 ------------------------------RRLALIDCPGHSGLIRAVLAASTVFDMAIV 101 R + +DCPGH L+ +L + + D A++ Sbjct: 3748546 CPLPDAYHAFPSSQPDNTNCPTCRAPLTLKRHFSFVDCPGHDVLMATMLNGAAIMDAALL 3748367 Query: 102 IIDVVAGI-QPQTAEHLLLASKFCPNRVIIVLNKCDLXXXXXXXXXXXXVRKGLKSMGVD 160 +I QPQT EHL +II+ NK DL +R + S + Sbjct: 3748366 LIAANEPFPQPQTLEHLKAVEIMKLRNLIILQNKIDLVGEVHAQDQYHKIRNYIDST-IG 3748190 Query: 161 ENSPIVEMSLADGYFKEEMLQNLKLAIE--SRIFEPKRDEEGEFLIAIDHCFAIKG---- 214 ++PI+ +S ++ +N+ +E R+ P R + + + F I Sbjct: 3748189 LSAPIIPIS-------AQLKRNVDYLLEYLCRMPLPTRQLKCPARMTVVRSFDINKPGEV 3748031 Query: 215 -----QGTVLTGTVIRGVLRLNTEIE 235 +G V GTV +GVLR+N +E Sbjct: 3748030 DIENLRGGVAGGTVTQGVLRVNQIVE 3747953 Score = 46.2 bits (108), Expect = 4e-05 Identities = 38/152 (25%), Positives = 67/152 (44%), Gaps = 30/152 (19%) Frame = -1 Query: 15 NLGILGHVDSGKTTLT------------------RRIAELGSTSAFD-AHATSTTTD--- 52 N+ GHVD+GK+T++ RR AE+ ++ A+ + D Sbjct: 1805668 NIVFCGHVDAGKSTISGHLLMEKGLVDQREMDKLRREAEIHHREGWEYAYVMDVSEDERM 1805489 Query: 53 -GIRRNTLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVV 106 GI R T + RR+ ++D PGH + +++ +T D+ +++I + Sbjct: 1805488 KGITRET----GAAYVETDKRRITVLDAPGHKAFVPSMIGGATQADVCVLVISSRTGEFE 1805321 Query: 107 AGIQP--QTAEHLLLASKFCPNRVIIVLNKCD 136 G + QT EH +L ++I V+NK D Sbjct: 1805320 TGFEKGGQTREHAMLVRTCGVKQMICVINKMD 1805225 Score = 45.8 bits (107), Expect = 5e-05 Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 8/130 (6%) Frame = -1 Query: 15 NLGILGHVDSGKTTLTRRIAELGSTSAFDAHATSTTTDG--------IRRNTLDLGFSTM 66 N+ ++ HVD GKTTL + + T + + D + +NT L T Sbjct: 12520 NIAVIAHVDHGKTTLVDEMLKQSETLVEARNRVMDSKDQEKERGITILAKNTAVL-LPTQ 12344 Query: 67 TSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEHLLLASKFCPN 126 RR+ ++D PGH V A + + I+++D G++P T ++L S Sbjct: 12343 EGGPQRRINIVDTPGHLDFSGEVERALQMVEGIILLVDAKEGVRPGT-RYVLRKSLAMRL 12167 Query: 127 RVIIVLNKCD 136 + I+ LNK D Sbjct: 12166 KPIVCLNKID 12137 >T.congo.pschr.7 Length = 2148087 Score = 48.9 bits (115), Expect = 6e-06 Identities = 33/110 (30%), Positives = 52/110 (47%) Frame = -1 Query: 13 PLNLGILGHVDSGKTTLTRRIAELGSTSAFDAHATSTTTDGIRRNTLDLGFSTMTSLSGR 72 P + I+GHVD GKTTL + + + S+ GI +N +G + + Sbjct: 830799 PPVVSIMGHVDHGKTTLLDHLRK--------TNVASSEAGGITQN---VGAFQVKVPGDK 830653 Query: 73 RLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEHLLLASK 122 + ID PGH+ A + D+ I+++ V G+Q QT E + LA K Sbjct: 830652 FITFIDTPGHAAFTTMREAGAAANDLIILVVSAVDGVQLQTKEVIGLAHK 830503 >T.congo.pschr.8 Length = 2451971 Score = 44.7 bits (104), Expect = 1e-04 Identities = 34/122 (27%), Positives = 57/122 (46%) Frame = -1 Query: 16 LGILGHVDSGKTTLTRRIAELGSTSAFDAHATSTTTDGIRRNTLDLGFSTMTSLSGRRLA 75 + +LGH GKTTL + + + A ++H T +R T+ S + + Sbjct: 1919267 IAVLGHTQHGKTTLLDALQKT-NIRAEESHG---VTQCLRAFTI-----PPHSDFHKAIT 1919115 Query: 76 LIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEHLLLASKFCPNRVIIVLNKC 135 ID PG A A + D A+VI+ + G++ QT E + +A +++V+NK Sbjct: 1919114 FIDTPGERLFTEARFHALNIADFAVVIVSAIDGVRSQTYEAIKVALN-VDKPIVVVINKM 1918938 Query: 136 DL 137 DL Sbjct: 1918937 DL 1918932 >T.congo.pschr.3. Length = 1451265 Score = 40.8 bits (94), Expect = 0.002 Identities = 42/131 (32%), Positives = 60/131 (45%), Gaps = 8/131 (6%) Frame = -3 Query: 15 NLGILGHVDSGKTTLT-RRIAELGSTSAFDAHAT----STTTDGIRRNTLDLGFSTMTSL 69 N ++ HVD GKTTL+ +A G S A S + RR T+ + + Sbjct: 432607 NFCVVAHVDHGKTTLSDYLVASNGILSPQLAGEVRLLDSRPDEQERRITMKASSVVLRHV 432428 Query: 70 SG---RRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEHLLLASKFCPN 126 L L+D PGH V A + D A+VI+DVV G+ Q+ L A + + Sbjct: 432427 HEDVVHLLNLVDSPGHIDFSCEVSTAMRLCDGAVVIVDVVDGVTQQSGGILRHAYREGLS 432248 Query: 127 RVIIVLNKCDL 137 + +VLNK DL Sbjct: 432247 -MCLVLNKVDL 432218 >T.congo.pschr.9 Length = 2092392 Score = 30.8 bits (68), Expect = 1.8 Identities = 14/66 (21%), Positives = 34/66 (51%), Gaps = 5/66 (7%) Frame = -3 Query: 76 LIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQPQTAEHLLLASKFCPNRVII 130 ++D PGH + + +++T D A++++ + G+ T +HL++ +++ Sbjct: 1346089 VLDAPGHRDYVLNMTSSATQADAALLVVTAAFSEFEVGLAHGTKDHLVVLKILGIGHLVV 1345910 Query: 131 VLNKCD 136 +NK D Sbjct: 1345909 AVNKMD 1345892 Database: T.congolense/genome.fa Posted date: Nov 21, 2011 7:47 PM Number of letters in database: 22,287,946 Number of sequences in database: 11 Lambda K H 0.322 0.138 0.404 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 11,568,953 Number of Sequences: 11 Number of extensions: 162650 Number of successful extensions: 740 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 487 Number of HSP's gapped (non-prelim): 505 length of query: 500 length of database: 7,429,315 effective HSP length: 102 effective length of query: 398 effective length of database: 7,428,193 effective search space: 2956420814 effective search space used: 2956420814 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 62 (28.5 bits)