TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SPP00000085_1.0 # Protein # Eukaryotic elongation factor (eEFSec) # Caenorhabditis elegans # Complete (500 letters) Database: L.donovani_BPK282A1/genome.fa 36 sequences; 32,444,998 total letters Searching....................................done Score E Sequences producing significant alignments: (bits) Value contig_34 138 1e-32 contig_18 101 2e-21 contig_33 60 4e-09 contig_22 56 6e-08 contig_17 56 6e-08 contig_28 52 8e-07 contig_09 52 1e-06 contig_36 48 2e-05 contig_25 48 2e-05 contig_35 47 3e-05 contig_11 47 3e-05 contig_24 44 4e-04 contig_30 30 4.3 >contig_34 Length = 1750858 Score = 138 bits (347), Expect = 1e-32 Identities = 104/356 (29%), Positives = 166/356 (46%), Gaps = 40/356 (11%) Frame = +1 Query: 14 LNLGILGHVDSGKTTLTRRIAELGSTSAFDAHATSTTTDGIRRNTLDLGFSTM------- 66 +N+G+LGHVDSGKT L + ++ ST+AFD S + R TLDLGFS Sbjct: 1179472 VNIGLLGHVDSGKTALAKALSSTASTAAFDKSPQSQS----RGITLDLGFSACEVSVEDG 1179639 Query: 67 ----------TSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEH 116 L+ + L+DCPGH+ LIR V+ + + D +++ID G+Q QTAE Sbjct: 1179640 NADATRVLREADLTKVQCTLVDCPGHASLIRTVVGGAQIIDAMVLVIDATKGMQVQTAEC 1179819 Query: 117 LLLASKFCPNRVIIVLNKCDL---XXXXXXXXXXXXVRKGLKSMGVDENSP---IVEMSL 170 L+L + +++VLNK D +++ L+ + P IVE++ Sbjct: 1179820 LIL-GEVLAKPLVVVLNKMDAIQGASPAAKEAALAALKRKLQQVFRRTRWPTVAIVEVAA 1179996 Query: 171 ADGYF---------KEEMLQNLKLAIESRIFEPKRDEEGE----FLIAIDHCFAIKGQGT 217 A E +L + A++ + ++ E E F + +DHCFA++GQGT Sbjct: 1179997 APREVAGGIGHPLNTEAVLPQVLRAVDLAALKSAKESEAERPAQFYMLVDHCFAVRGQGT 1180176 Query: 218 VLTGTVIRGVLRLNTEIEFPALNEKRRVKTLETWKXXXXXXXXXXXXXFLVAPSFDEHRF 277 V TGTV+ GV+R+ + P L R+VK L+ + VA FD Sbjct: 1180177 VFTGTVVAGVVRVGDTVLVPELQTTRKVKGLQVFHKPVEMAQSGDRVGLCVA-QFDPTWM 1180353 Query: 278 SR---CICGPLG-TLKSTKFVLATVEPIQFFRKSINSKSKIHVAVAFETVMAECQF 329 R C G L S+ ++A V +++ ++ +K H+ + TVM ++ Sbjct: 1180354 ERGVLCSAASSGRALVSSSQLIARVHRVRYHPLPCDTHTKFHITIGHATVMGTMRY 1180521 Score = 40.4 bits (93), Expect = 0.003 Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 11/133 (8%) Frame = +1 Query: 15 NLGILGHVDSGKTTLTRRIAELGSTSAFDAHATSTTTDG----------IRRNTLDLGFS 64 N+ ++ HVD GKTTL+ + + D AT T TD I+ T + + Sbjct: 239533 NVSVVAHVDHGKTTLSDAMLRFSNLLPADG-ATGTFTDRLKVEKERGITIKAQTCSVLLT 239709 Query: 65 TMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEHLLLASKFC 124 + + + LID PGH V + + A +++DV G++ QT A + Sbjct: 239710 VRETGTQYLVNLIDTPGHVDFQYEVSRSLCASEGAALLVDVRQGVEAQTMAQFYAALE-- 239883 Query: 125 PNRVII-VLNKCD 136 N I+ VL K D Sbjct: 239884 QNLTILPVLTKMD 239922 >contig_18 Length = 735640 Score = 101 bits (251), Expect = 2e-21 Identities = 71/242 (29%), Positives = 114/242 (47%), Gaps = 12/242 (4%) Frame = +1 Query: 14 LNLGILGHVDSGKTTLTRRI----AELGSTSAFDAHATSTTTDGIRRNTLDLGFSTMTSL 69 L +G +GHVD GKTTLT I A+ G A D A + + R Sbjct: 309094 LIIGTIGHVDHGKTTLTSAITTVLAKRGQAQALDYFAIDKSPEEKSRKITINATHVEYES 309273 Query: 70 SGRRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEHLLLASKFCPNRVI 129 R IDCPGH ++ ++ + D I+++ G+ PQT EHLL+ S+ ++ Sbjct: 309274 EKRHYGHIDCPGHMDFVKNMITGAAQMDGGIIVVAATDGVMPQTREHLLICSQIGLPALV 309453 Query: 130 IVLNKCDLXXXXXXXXXXXXVRKGLKSMGVD-ENSPIVEMSL-----ADGYFKEEMLQNL 183 +NK D+ +R+ L+ E +PIV S D ++E +L+ L Sbjct: 309454 GFINKVDMTDEDTCDLVDMELREQLEKYKFPAEETPIVRGSALKAVEGDAKYEENILE-L 309630 Query: 184 KLAIESRIFEPKRDEEGEFLIAIDHCFAI--KGQGTVLTGTVIRGVLRLNTEIEFPALNE 241 + I +P R+ + FL+AI+H + I + V+TG V +G+L+LNT+ E + Sbjct: 309631 VRKCDEWIPDPPRNTDKPFLMAIEHVYEIGKDKKSVVVTGRVDQGILKLNTDAELAGFSS 309810 Query: 242 KR 243 K+ Sbjct: 309811 KK 309816 >contig_33 Length = 1453978 Score = 60.1 bits (144), Expect = 4e-09 Identities = 43/127 (33%), Positives = 65/127 (51%), Gaps = 8/127 (6%) Frame = +3 Query: 18 ILGHVDSGKTTLTRRI-------AELGSTSAFDAHATSTTTDGIRRNTLDLGFSTMTSLS 70 +LGHVD+GKT+L RI E G + AT + + T +L +L+ Sbjct: 1126773 VLGHVDTGKTSLLDRIRSTNVQGGEAGGITQ-QIGATFFPRESLVSATAELIKKHKCNLN 1126949 Query: 71 GRRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEHL-LLASKFCPNRVI 129 L +ID PGH S++ D+AI+++D++ G++ QT E + LL K CP I Sbjct: 1126950 VPGLLVIDTPGHESFTNLRSRGSSLCDIAILVVDIMHGLEQQTRESIRLLREKRCP--FI 1127123 Query: 130 IVLNKCD 136 + LNK D Sbjct: 1127124 VALNKVD 1127144 Score = 49.7 bits (117), Expect = 5e-06 Identities = 48/193 (24%), Positives = 77/193 (39%), Gaps = 24/193 (12%) Frame = +3 Query: 66 MTSLSGRRLALIDCPGHSGLIRAVLAAST--VFDMAIVIIDVVAGIQPQTAEHLLLASKF 123 + + S + + L D GH ++ + T + D A ++I GIQ T EHL L Sbjct: 1161048 LATRSSKVVTLYDLAGHERYLKTTVLGMTRNMPDYACIVISANNGIQRMTKEHLALCLAL 1161227 Query: 124 CPNRVIIVLNKCDLXXXXXXXXXXXXVRKGL----------------------KSMGVDE 161 IV+ + D ++K L K++ D Sbjct: 1161228 -KLPFFIVVTRIDATPSNIHDETLSNIQKLLKIPTVRKLPYPVRRHDEVTLAAKNLRYDR 1161404 Query: 162 NSPIVEMSLADGYFKEEMLQNLKLAIESRIFEPKRDEEGEFLIAIDHCFAIKGQGTVLTG 221 +PI E+S G ++LQ L L + + RD E + ID F + G GTV+ G Sbjct: 1161405 IAPIFEVSNVTGAGIPDLLQFLNLLPTRKDWRQARDMPKEMI--IDSTFFVTGVGTVVGG 1161578 Query: 222 TVIRGVLRLNTEI 234 + +GV R+N + Sbjct: 1161579 IITQGVFRVNETV 1161617 Score = 32.3 bits (72), Expect = 0.87 Identities = 28/109 (25%), Positives = 46/109 (42%) Frame = +3 Query: 18 ILGHVDSGKTTLTRRIAELGSTSAFDAHATSTTTDGIRRNTLDLGFSTMTSLSGRRLALI 77 ++G SGKT L ++ FD+ + G G S T+ + ++ Sbjct: 1068048 LIGLPGSGKTALFVQLVH--HQQLFDSRTSMRENSGYMCAAAQHGRSNSTA----GVKVV 1068209 Query: 78 DCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEHLLLASKFCPN 126 DCPGH L + +L A +V+ID V +Q E + ++F N Sbjct: 1068210 DCPGHPRLHQGMLRALNEAVNVVVVIDSVT-VQDNQQEGVAALAEFLFN 1068353 >contig_22 Length = 704761 Score = 56.2 bits (134), Expect = 6e-08 Identities = 55/230 (23%), Positives = 91/230 (39%), Gaps = 12/230 (5%) Frame = -1 Query: 13 PLNLGILGHVDSGKTTLTRRIAELGSTSAFDAHATSTTTDGIRRNTLDLGFSTMTSLSGR 72 P + I+GHVD GKTTL + + + GI +N +G + + G Sbjct: 481342 PPIVSIMGHVDHGKTTLLDHLRH--------TNVAAGEAGGITQN---VGAFQVKTPDGH 481196 Query: 73 RLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEHLLLASKFCPNRVIIVL 132 + ID PGH+ +T D+ ++I+ V G+QPQT E + LA + +++ + Sbjct: 481195 IITFIDTPGHAAFTAMREVGATTNDLIVLIVSAVDGVQPQTREVIELAQR-KGTPMVVAV 481019 Query: 133 NKCDLXXXXXXXXXXXXVRKGLKSMGVDENSPIVEMSLADGYFKEEMLQNLKLAIESRIF 192 K D V G++ + +V++ DG E+L+ L L E Sbjct: 481018 TKID-RQPDCDYVKDQLVANGVELEEKGGDVQLVKICAKDGRGIPELLEALHLQAELCEV 480842 Query: 193 EPKRDEEGEFLI------------AIDHCFAIKGQGTVLTGTVIRGVLRL 230 E + A+ C +K +TGTV V R+ Sbjct: 480841 ATPTPSRAELYVLESRNLGVSEVAAVVRCGTVKPGQVFVTGTVYGTVKRI 480692 >contig_17 Length = 671483 Score = 56.2 bits (134), Expect = 6e-08 Identities = 66/275 (24%), Positives = 103/275 (37%), Gaps = 39/275 (14%) Frame = -2 Query: 14 LNLGILGHVDSGKTTLT-------------------RRIAELGSTSAFDAHATSTTTDGI 54 +NL ++GHVD+GK+T T + AE+G S A Sbjct: 69451 MNLVVVGHVDAGKSTATGHLIYKCGGIDKRTIEKFEKEAAEIGKASFKYAWVLDKLKAER 69272 Query: 55 RRN-TLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVV-----AG 108 R T+D+ S +ID PGH I+ ++ ++ D AI++ID AG Sbjct: 69271 ERGITIDIALWKFESPKSV-FTIIDAPGHRDFIKNMITGTSQADAAILMIDSTHGGFEAG 69095 Query: 109 IQP--QTAEHLLLASKFCPNRVIIVLNKCDLXXXXXXXXXXXXVRK--GLKSMGVDENSP 164 I QT EH LLA ++++ NK D + K G V N Sbjct: 69094 ISKDGQTREHALLAFTLGVKQMVVCCNKMDDKTVTYAQSRYDEISKEVGAYLKRVGYNPE 68915 Query: 165 IVEMSLADGYFKEEMLQN----------LKLAIESRIFEPKRDEEGEFLIAIDHCFAIKG 214 V G+ + M++ L + P R + + + + I G Sbjct: 68914 KVRFIPISGWQGDNMIERSDNMPWYKGPTLLDALDMLEPPVRPVDKPLRLPLQDVYKIGG 68735 Query: 215 QGTVLTGTVIRGVLRLNTEIEFPALNEKRRVKTLE 249 GTV G V G+++ + F N VK++E Sbjct: 68734 IGTVPVGRVETGIMKPGDVVTFAPANVTTEVKSIE 68630 >contig_28 Length = 1171725 Score = 52.4 bits (124), Expect = 8e-07 Identities = 39/128 (30%), Positives = 56/128 (43%), Gaps = 6/128 (4%) Frame = -2 Query: 15 NLGILGHVDSGKTTLTRR-IAELGSTSAFDAHATSTTTDGIRRNTLDLGFSTMTSLSGRR 73 N+GI H+D+GKTT T R + G T TTT + D G + ++ R Sbjct: 781118 NIGIAAHIDAGKTTTTERMLFYAGVTKRVGDVDRGTTTTDFMKEEADRGITIQSAAVSLR 780939 Query: 74 -----LALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEHLLLASKFCPNRV 128 + LID PGH V + D + + D AG+Q Q+ L + +F + Sbjct: 780938 WRDHGINLIDTPGHVDFTVEVERTMRIVDGVVALFDASAGVQAQSYTVLQQSRRF-NAPL 780762 Query: 129 IIVLNKCD 136 I LNK D Sbjct: 780761 IAFLNKMD 780738 >contig_09 Length = 588727 Score = 51.6 bits (122), Expect = 1e-06 Identities = 45/189 (23%), Positives = 75/189 (39%), Gaps = 33/189 (17%) Frame = -2 Query: 14 LNLGILGHVDSGKTTLTRRIAELGSTSAFDAHATSTTTDGIRRNTLDLGFSTM------- 66 +N+G +GHV GK+T+ + ++ + T F A + T+ LG++ Sbjct: 448455 INVGTIGHVAHGKSTVVKALSGV-KTQKFHREA-------VMNITIHLGYANAKVYQCET 448300 Query: 67 -------------------------TSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIV 101 T R + +DCPGH L+ +L + + D A++ Sbjct: 448299 CPRPTCYQTYPSSQPDSTPCPNCGETMTLKRHFSFVDCPGHDVLMATMLNGAAIMDAALL 448120 Query: 102 IIDVVAGI-QPQTAEHLLLASKFCPNRVIIVLNKCDLXXXXXXXXXXXXVRKGLKSMGVD 160 +I QPQT EHL ++++ NK DL VR L ++ + Sbjct: 448119 LIAANESFPQPQTLEHLKAVEIMKLRHLVVLQNKIDLVGEVKAHDQYRHVRAYLDNIAL- 447943 Query: 161 ENSPIVEMS 169 N PIV +S Sbjct: 447942 -NVPIVPIS 447919 Score = 50.4 bits (119), Expect = 3e-06 Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 10/183 (5%) Frame = -2 Query: 72 RRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGI-QPQTAEHLLLASKFCPNRVII 130 R + +DCPGH L+ +L + + D A+++I QPQT EHL A + +I+ Sbjct: 451515 RHFSFVDCPGHDVLMATMLNGAAIMDAALLLIAANESFPQPQTLEHLAAAEMIGVSSLIV 451336 Query: 131 VLNKCDLXXXXXXXXXXXXVRKGLKSMGVDENSPIVEMSLADGY---FKEEMLQNLKLAI 187 + NK DL + L + +P++ + F + L ++ L Sbjct: 451335 LQNKVDLVSKERAAAQYSIIHHYLATKTAYAKAPVIPICAQQHVNISFLLDYLVHIPLPR 451156 Query: 188 ESRIFEPKRDEEGEFLIAI-----DHCFAIKGQGTVLTGTVIRGVLRLNTEIE-FPALNE 241 + F +++ D A+K G V+ GTV GVL + EIE P L Sbjct: 451155 RQLHHAQYMNVLRSFDVSLPGPAGDGAKALK--GGVVGGTVAAGVLCVGDEIEIIPGLLV 450982 Query: 242 KRR 244 RR Sbjct: 450981 LRR 450973 >contig_36 Length = 2713248 Score = 48.1 bits (113), Expect = 2e-05 Identities = 33/108 (30%), Positives = 47/108 (43%), Gaps = 9/108 (8%) Frame = +3 Query: 15 NLGILGHVDSGKTTLTRRIAELGSTSAFDAHATSTTTDGIRRNTLDL---------GFST 65 N+GI H+DSGKTTL+ RI T G ++++L +T Sbjct: 163047 NIGISAHIDSGKTTLSERILFYSGRIGKIHEVKGGTEVGATMDSMELEKERGITIRSAAT 163226 Query: 66 MTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQT 113 + +ID PGH V A V D AI+++ V G+Q QT Sbjct: 163227 QCRWKNSTINIIDTPGHVDFTIEVERALRVLDGAILLMCAVGGVQSQT 163370 Score = 45.1 bits (105), Expect = 1e-04 Identities = 38/140 (27%), Positives = 60/140 (42%), Gaps = 18/140 (12%) Frame = -1 Query: 15 NLGILGHVDSGKTTLTR---------RIAELGSTSAFDAHATSTTTD-GIRRNTLDLGFS 64 N+ ++ HVD GK+TL+ ++ E G D A I+ + + + Sbjct: 60993 NMSVIAHVDHGKSTLSDSLVGAAGIIKMEEAGDKRIMDTRADEIARGITIKSTAISMHYH 60814 Query: 65 TMTSLSGRR--------LALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEH 116 + G + LID PGH V AA V D A+V++D V G+ QT E Sbjct: 60813 VPKEMIGDLDDDKRDFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVEGVCVQT-ET 60637 Query: 117 LLLASKFCPNRVIIVLNKCD 136 +L + R ++ +NK D Sbjct: 60636 VLRQALTERIRPVVFINKVD 60577 >contig_25 Length = 897883 Score = 48.1 bits (113), Expect = 2e-05 Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 3/125 (2%) Frame = -1 Query: 15 NLGILGHVDSGKTTLTRRIAELGSTSAFDAHATSTTTDGIR-RNTLDLGFSTMTSLSG-- 71 N+ ++ HVD GKTTL + T A + + D R R L +T L Sbjct: 36256 NIAVIAHVDHGKTTLVDSMLSQSGTVANAHNRVMDSKDQERERGITILAKNTAIILDNGK 36077 Query: 72 RRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEHLLLASKFCPNRVIIV 131 RR+ ++D PGH V A + + I+++D G++P T ++L + R I+ Sbjct: 36076 RRINIVDTPGHLDFSGEVERALQMVEGIILLVDAKEGVRPGT-RYVLRKALSLHLRPIVC 35900 Query: 132 LNKCD 136 LNK D Sbjct: 35899 LNKID 35885 Score = 41.2 bits (95), Expect = 0.002 Identities = 38/131 (29%), Positives = 56/131 (42%), Gaps = 8/131 (6%) Frame = -1 Query: 15 NLGILGHVDSGKTTLTRRIAE----LGSTSAFDAHATSTTTDG----IRRNTLDLGFSTM 66 N ++ HVD GKTTL+ + L A + + D I + Sbjct: 785362 NFCMVAHVDHGKTTLSDYLVASNGILSPQLAGEVRLLDSRPDEQERCITMKASSIALHHA 785183 Query: 67 TSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEHLLLASKFCPN 126 + L L+D PGH V A + D A+VI+DVV G+ QT+ +L + Sbjct: 785182 YAGKSHVLNLVDSPGHIDFSCEVSTAMRLCDGAVVIVDVVDGVTQQTSS-ILRHTYQEGL 785006 Query: 127 RVIIVLNKCDL 137 + +VLNK DL Sbjct: 785005 SMCLVLNKIDL 784973 >contig_35 Length = 2113966 Score = 47.4 bits (111), Expect = 3e-05 Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Frame = +1 Query: 18 ILGHVDSGK-TTLTRRIAELGSTSAFDAHATSTTTDGIRRN------------------- 57 I GHVD+GK TTL + LG S D R++ Sbjct: 1667821 IAGHVDAGKSTTLGHLLLLLGRVSIQDVERNEKADRTHRKDSFKYAWLLDQCEEERRRGV 1668000 Query: 58 TLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQPQ 112 T+D G S RR+ ++D PGH + ++++++T D A++++ + G+ Sbjct: 1668001 TIDSG-SFCFETEHRRVHILDAPGHKDFVLSMISSATQADAALLVVTAATSEFETGLHHG 1668177 Query: 113 TAEHLLLASKFCPNRVIIVLNKCD 136 T HLL+ +++ +NK D Sbjct: 1668178 TKSHLLVLKTLGVGSIVVAVNKMD 1668249 >contig_11 Length = 580223 Score = 47.0 bits (110), Expect = 3e-05 Identities = 39/152 (25%), Positives = 68/152 (44%), Gaps = 30/152 (19%) Frame = +2 Query: 15 NLGILGHVDSGKTTLT------------------RRIAELGSTSAFD-AHATSTTTD--- 52 N+ GHVD+GK+T++ RR AE+ ++ A+ + + Sbjct: 473609 NIVFCGHVDAGKSTISGHLLMEKGLVDQREMEKLRREAEINHREGWEYAYVMDVSEEERS 473788 Query: 53 -GIRRNTLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVV 106 GI R T F T RR+ ++D PGH + +++ +T D+ +++I + Sbjct: 473789 KGITRETGAAYFET----EKRRVTVLDAPGHKAFVPSMIGGATQADICVLVISSRTGEFE 473956 Query: 107 AGIQP--QTAEHLLLASKFCPNRVIIVLNKCD 136 G + QT EH +L ++I V+NK D Sbjct: 473957 TGFEKGGQTREHAMLVRTCGVKQMICVINKMD 474052 >contig_24 Length = 877124 Score = 43.5 bits (101), Expect = 4e-04 Identities = 34/120 (28%), Positives = 49/120 (40%) Frame = +3 Query: 18 ILGHVDSGKTTLTRRIAELGSTSAFDAHATSTTTDGIRRNTLDLGFSTMTSLSGRRLALI 77 ++GHV+ GKT L + S A T +R T+ I Sbjct: 493590 VMGHVNHGKTALLDAL----QGSRIGAEEPHHITQSVRAFTI-----PRPGADNDLFTFI 493742 Query: 78 DCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEHLLLASKFCPNRVIIVLNKCDL 137 D PGH + + D+ ++I V GI+ QT E + +A VI+VLNK DL Sbjct: 493743 DTPGHRIFVETRFHVQLMADVIALVISVAEGIESQTHETIKVALN-VDKPVIVVLNKLDL 493919 >contig_30 Length = 1374157 Score = 30.0 bits (66), Expect = 4.3 Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 2/63 (3%) Frame = -3 Query: 360 LPENYSNPFMAARLEQQPGSGCRFAFSGIFSQILP--ENGKNLPPRFTRKCRKGHVERVE 417 LP P A R +P S C S S +LP + LP F R C +G E Sbjct: 162764 LPNVSVTPASAERRSHRPRSSCGLCSSPASSSLLPHTKESTGLPRSFLRSC-EGRAEAAA 162588 Query: 418 KDG 420 ++G Sbjct: 162587 EEG 162579 Database: L.donovani_BPK282A1/genome.fa Posted date: Nov 21, 2011 7:46 PM Number of letters in database: 32,444,998 Number of sequences in database: 36 Lambda K H 0.322 0.138 0.404 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 17,999,870 Number of Sequences: 36 Number of extensions: 273256 Number of successful extensions: 1355 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 1207 Number of HSP's gapped (non-prelim): 397 length of query: 500 length of database: 10,814,999 effective HSP length: 105 effective length of query: 395 effective length of database: 10,811,219 effective search space: 4270431505 effective search space used: 4270431505 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 63 (28.9 bits)