TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SPP00000085_1.0 # Protein # Eukaryotic elongation factor (eEFSec) # Caenorhabditis elegans # Complete (500 letters) Database: I.multifiliis_strain_G5/genome.fa 2017 sequences; 48,799,969 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|340502060|gb|GL984210.1| Ichthyophthirius multifiliis unplace... 89 1e-17 gi|340502432|gb|GL984181.1| Ichthyophthirius multifiliis unplace... 77 6e-14 gi|340506248|gb|GL983673.1| Ichthyophthirius multifiliis unplace... 50 8e-06 gi|340506843|gb|GL983551.1| Ichthyophthirius multifiliis unplace... 49 2e-05 gi|340504448|gb|GL983932.1| Ichthyophthirius multifiliis unplace... 42 0.002 gi|340508484|gb|GL983184.1| Ichthyophthirius multifiliis unplace... 42 0.002 gi|340504364|gb|GL983940.1| Ichthyophthirius multifiliis unplace... 40 0.005 gi|340502006|gb|GL984212.1| Ichthyophthirius multifiliis unplace... 40 0.008 gi|340502133|gb|GL984206.1| Ichthyophthirius multifiliis unplace... 40 0.008 gi|340501044|gb|GL984312.1| Ichthyophthirius multifiliis unplace... 37 0.068 gi|340503223|gb|GL984102.1| Ichthyophthirius multifiliis unplace... 33 0.58 gi|340505879|gb|GL983770.1| Ichthyophthirius multifiliis unplace... 32 1.3 gi|340508198|gb|GL983251.1| Ichthyophthirius multifiliis unplace... 32 1.3 gi|340500110|gb|GL984391.1| Ichthyophthirius multifiliis unplace... 32 1.7 gi|340502308|gb|GL984194.1| Ichthyophthirius multifiliis unplace... 31 2.9 >gi|340502060|gb|GL984210.1| Ichthyophthirius multifiliis unplaced genomic scaffold scaff_1120509251249, whole genome shotgun sequence Length = 34306 Score = 89.0 bits (219), Expect = 1e-17 Identities = 71/259 (27%), Positives = 124/259 (47%), Gaps = 20/259 (7%) Frame = -1 Query: 14 LNLGILGHVDSGKTTLTRRIAELGST---SAFDAH-----ATSTTTDGIRRNTLDLGFST 65 LN+G +GH+D GKTTLT I ++ + + F + A GI NT + + T Sbjct: 11884 LNVGTIGHIDHGKTTLTAAITKILAQK*QATFMEYS*IDKAPEEKARGITINTATVEYET 11705 Query: 66 MTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEHLLLASKFCP 125 T R +DCPGH ++ ++ + D I++ G+ P T EH+LL Sbjct: 11704 ET----RHYGHVDCPGHIDYVKNMITGAAKMDAGILVCSATDGVMP*TREHILLCR*VGV 11537 Query: 126 NRVIIVLNKCDL-XXXXXXXXXXXXVRKGLKSMGVD-ENSPIV------EMSLADGYFKE 177 N +I+ +NKCD+ VR+ L D E SP++ ++ + E Sbjct: 11536 NTIIVFVNKCDVAKDSEIQELVEMEVRELLAKYEYDGEKSPVIFGSALCALNGTEKELGE 11357 Query: 178 EMLQNLKLAIESRIFEPKRDEEGEFLIAIDHCFAIKGQGTVLTGTVIRGVLRLNTEIEF- 236 + + L ++ I P R + FL++I+ + I G+GTV+TGTV G +++ +++ Sbjct: 11356 DKVV*LLKIMDE*IPIP*RLTDKPFLMSIEGTY*IAGRGTVVTGTVDAGKVKVGEDVDVA 11177 Query: 237 ---PALNEKRRVKTLETWK 252 P +N + + +ET++ Sbjct: 11176 GYAPKIN-RTTITGIETFR 11123 >gi|340502432|gb|GL984181.1| Ichthyophthirius multifiliis unplaced genomic scaffold scaff_1120509251220, whole genome shotgun sequence Length = 143409 Score = 76.6 bits (187), Expect = 6e-14 Identities = 45/132 (34%), Positives = 75/132 (56%), Gaps = 11/132 (8%) Frame = -1 Query: 17 GILGHVDSGKTTLTRRIAELGSTSAFDAHATSTTTDGIRRNTLDLGFSTMTSLSGRRL-- 74 G+LGH+DSGKT+L++ ++++ ST++ D + S R TLDLGFS + + + Sbjct: 33552 GVLGHIDSGKTSLSKALSKITSTASLDKNP*S*E----RGITLDLGFSAFFTRNPEKFRE 33385 Query: 75 ---------ALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEHLLLASKFCP 125 L+DCPGH+ LI+ +L +++ D+ ++ID+ GI TAE L++ + F Sbjct: 33384 *LKAEYL*FTLVDCPGHASLIKTILGGASIIDIMFLVIDINKGI*T*TAECLVIGNFFIK 33205 Query: 126 NRVIIVLNKCDL 137 V + L K L Sbjct: 33204 KIVFL*L*KIQL 33169 Score = 60.5 bits (145), Expect = 4e-09 Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 3/94 (3%) Frame = -3 Query: 162 NSPIVEMSLADGYFKEEMLQNLKLAIESR---IFEPKRDEEGEFLIAIDHCFAIKGQGTV 218 N PI+ +S + K N+ L I+ I PKR+++G F IDHCF IKG+G+V Sbjct: 33034 NVPIIPVSAVENENK-----NM*LLIDCLLD*IEIPKRNKDGPFYFLIDHCFPIKGKGSV 32870 Query: 219 LTGTVIRGVLRLNTEIEFPALNEKRRVKTLETWK 252 +TGTVI G E+EFP + ++ K+++ +K Sbjct: 32869 ITGTVI*GSHTSG*EVEFPLIK*TKKSKSMQMFK 32768 Score = 52.0 bits (123), Expect = 2e-06 Identities = 43/126 (34%), Positives = 60/126 (47%), Gaps = 5/126 (3%) Frame = -1 Query: 351 LFSFEKSIFLPENYSNPFMAARLEQQPGSG-CRFAFSGIFSQILPENGKNLPPR---FTR 406 L FEK ++ + F+ ++ + S CR F G L + N + F Sbjct: 32316 LIEFEKEMYA--SAGTLFICSKFDTDVSSNLCRLGFYGNALVALVQGDFNKDKKLKIFRE 32143 Query: 407 KCRKGHVERVEKDGFSAICTGMFKAETNFDVFRGFQICTSS-GPRGKIEGAFGKSGKFRV 465 K R+G VE+V DGF+ I MFK ET ++F I + G GKI AFGKSGK + Sbjct: 32142 KTREGTVEKV-CDGFTIIIKDMFKKETKIELFLNKSIYIENFGNVGKI*CAFGKSGKIKA 31966 Query: 466 TFAEKI 471 F+ I Sbjct: 31965 LFSNGI 31948 >gi|340506248|gb|GL983673.1| Ichthyophthirius multifiliis unplaced genomic scaffold scaff_1120509250587, whole genome shotgun sequence Length = 90329 Score = 49.7 bits (117), Expect = 8e-06 Identities = 65/275 (23%), Positives = 113/275 (41%), Gaps = 39/275 (14%) Frame = +1 Query: 14 LNLGILGHVDSGKTTLT-----------RRIAELGSTSAFDAHATS---------TTTDG 53 +NL ++GHVDSGK+T T +R E + +A S + Sbjct: 38320 INLVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKESSEAGKGSFKYAWVLDKLKAER 38499 Query: 54 IRRNTLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAG 108 R T+D+ + +ID PGH I+ ++ ++ D+AI++I + AG Sbjct: 38500 ERGITIDISLWKFETAK-YHFTIIDAPGHRDFIKNMITGTS*ADVAILMIASP*GEFEAG 38676 Query: 109 IQPQ--TAEHLLLASKFCPNRVIIVLNKCDLXXXXXXXXXXXXVRKG----LKSMGVDEN 162 I T EH LLA +++ +NK D ++K LK +G + Sbjct: 38677 ISKDG*TREHALLAFTLGVK*MVVCMNKMDEKTVNYSEERY*EIKKELSDYLKKVGYKPD 38856 Query: 163 S-PIVEMSLADGYFKEEMLQNL-----KLAIES--RIFEPKRDEEGEFLIAIDHCFAIKG 214 + P + +S +G E N+ + +E+ + PKR + + + + I G Sbjct: 38857 TIPFIPISGFNGDNMLERSSNMPWYKGPIMVEALDALEAPKRPLDKPLRLPL*DVYKIGG 39036 Query: 215 QGTVLTGTVIRGVLRLNTEIEFPALNEKRRVKTLE 249 GTV G V G+++ I F + K++E Sbjct: 39037 IGTVPVGRVETGIIKPGMLIRFAPGKIEAECKSVE 39141 >gi|340506843|gb|GL983551.1| Ichthyophthirius multifiliis unplaced genomic scaffold scaff_1120509250345, whole genome shotgun sequence Length = 63840 Score = 48.5 bits (114), Expect = 2e-05 Identities = 43/144 (29%), Positives = 62/144 (43%), Gaps = 25/144 (17%) Frame = +1 Query: 18 ILGHVDSGKTTLTRRIAELGSTSAFDAH------------------------ATSTTTDG 53 ILGHVD+GKTTL + +L +T+ H AT + Sbjct: 46135 ILGHVDTGKTTL---LDKLRNTNVIFFHFF*NFLYLIKV*AGEAGGIT**IGATFFPGEN 46305 Query: 54 IRRNTLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQT 113 ++R L L +ID PGH S++ D AI++ID++ G++P T Sbjct: 46306 VKRECKKTEAFYPVELKAPGLLVIDTPGHESFSNLRNRGSSLCDFAILVIDLMHGLEP*T 46485 Query: 114 AEHL-LLASKFCPNRVIIVLNKCD 136 E L LL + P +I LNK D Sbjct: 46486 IESLNLLRMRKTP--FVIALNKID 46551 >gi|340504448|gb|GL983932.1| Ichthyophthirius multifiliis unplaced genomic scaffold scaff_1120509250968, whole genome shotgun sequence Length = 104378 Score = 41.6 bits (96), Expect = 0.002 Identities = 40/150 (26%), Positives = 61/150 (40%), Gaps = 25/150 (16%) Frame = -3 Query: 12 GPLNLGILGHVDSGKTTLTRRIAE-LGSTSAFDAHATSTTTDGIRRNTLDLGFSTMTS-- 68 G LN+ +GHVD GK+TL+ RI + G + R + L + T+ Sbjct: 42621 GSLNIVFIGHVDHGKSTLSGRILKNCGEVEE*EIRKYE*EAKENSRESWSLAYIMDTNEE 42442 Query: 69 ----------------LSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVA 107 L RR LID PGH + ++ + D+A ++I + A Sbjct: 42441 ERTKGITVECGKAHF*LP*RRFVLIDAPGHKNYVPNMITGACQADVAALVISARQGEFEA 42262 Query: 108 GIQPQ-TAEHLLLASKFCPNRVIIVLNKCD 136 G + T EH LA VI +++K D Sbjct: 42261 GFEGG*T*EHAHLAKALGVQHVICIVSKMD 42172 >gi|340508484|gb|GL983184.1| Ichthyophthirius multifiliis unplaced genomic scaffold scaff_1120509249660, whole genome shotgun sequence Length = 19720 Score = 41.6 bits (96), Expect = 0.002 Identities = 49/181 (27%), Positives = 76/181 (41%), Gaps = 10/181 (5%) Frame = +1 Query: 72 RRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQ----PQTAEHLLLASKFCPNR 127 R ++ +DCPGH L+ +L + V D A++II AG P TAEHL Sbjct: 6361 RHVSFVDCPGHDILMSTMLTGAAVMDAALLII---AGNMSCP*P*TAEHLAAVDIMKLK* 6531 Query: 128 VIIVLNKCDLXXXXXXXXXXXXVRKGLKSMGVD-ENSPIVEMSLADGYFKEE----MLQN 182 ++I+ NK D+ +G + ENSPI+ S Y + + Sbjct: 6532 ILII*NKVDVIFKDP*AA*NNYKEIKNFILGTNAENSPIIPCSA*LKYNVDAVC*YICSY 6711 Query: 183 LKLAIESRIFEPKRDEEGEFLIAIDHCFAIKGQGTVLTGTVIRGVLRLNTEIEF-PALNE 241 + + PK F + K +G V+ G+++ GVL++ EIE P L Sbjct: 6712 FAVPLREL*VPPKLIIIRSFDVNKPGATVNKLKGGVVGGSIL*GVLKIGDEIEIRPGLIN 6891 Query: 242 K 242 K Sbjct: 6892 K 6894 >gi|340504364|gb|GL983940.1| Ichthyophthirius multifiliis unplaced genomic scaffold scaff_1120509250976, whole genome shotgun sequence Length = 114467 Score = 40.4 bits (93), Expect = 0.005 Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 1/121 (0%) Frame = -1 Query: 18 ILGHVDSGKTTLTRRIAELGSTSAFDAHATSTTTDGIRRNTLDLGFSTMTSLSGRRLALI 77 I+GHVD GKTT+ + + + S GI T +G + + R+ I Sbjct: 61397 IMGHVDHGKTTILDYLRK--------SSIASGEYGGI---T*KIGAFHVITP*N*RITFI 61251 Query: 78 DCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEHLLLAS-KFCPNRVIIVLNKCD 136 D PGH + D+ I+++ + G+ PQT E + +A P +I+ +NK D Sbjct: 61250 DTPGHEAFSNMRFRGANSTDIIILVVSAIEGL*PQTLEAIKMAY*SEVP--MIVAINKID 61077 Query: 137 L 137 + Sbjct: 61076 V 61074 >gi|340502006|gb|GL984212.1| Ichthyophthirius multifiliis unplaced genomic scaffold scaff_1120509251251, whole genome shotgun sequence Length = 255633 Score = 39.7 bits (91), Expect = 0.008 Identities = 38/128 (29%), Positives = 58/128 (45%), Gaps = 7/128 (5%) Frame = +3 Query: 16 LGILGHVDSGKTTLTRRIAE----LGSTSAFD--AHATSTTTDG-IRRNTLDLGFSTMTS 68 + ILGHVD+GKT L ++ LG AT + I++ + F + Sbjct: 127920 VSILGHVDTGKTKLLDKLRNTNV*LGEAGGIT**IGATYFPKENIIQQIEKCVEFYPLKE 128099 Query: 69 LSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEHLLLASKFCPNRV 128 L +ID PGH S + D+AI+++D++ G++ T E + L K Sbjct: 128100 *EINNLLIIDTPGHECFENLRKRGSKMCDLAILVVDLMHGLEA*TIECINLFKK-*KIPY 128276 Query: 129 IIVLNKCD 136 II LNK D Sbjct: 128277 IIALNKID 128300 >gi|340502133|gb|GL984206.1| Ichthyophthirius multifiliis unplaced genomic scaffold scaff_1120509251245, whole genome shotgun sequence Length = 140986 Score = 39.7 bits (91), Expect = 0.008 Identities = 38/147 (25%), Positives = 61/147 (41%), Gaps = 25/147 (17%) Frame = +1 Query: 15 NLGILGHVDSGKTTLTRRIAE-LGSTSAFDAHATSTTTDGIRRNT------LDLGFSTMT 67 N+ +GHVD+GK+TL+ RI + G + R + +D+ T Sbjct: 81847 NIVFIGHVDAGKSTLSGRILKNCGEVDEVEIRKYE*EAKENNRESWVLAYIMDINDEERT 82026 Query: 68 S------------LSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQ 110 L RR L+D PGH + ++A + D+A ++I + AG + Sbjct: 82027 KGITVECGKAHF*L*NRRFVLLDAPGHKNYVPNMIAGAC*ADIAALVISAR*GEFEAGFE 82206 Query: 111 -PQTAEHLLLASKFCPNRVIIVLNKCD 136 QT EH LA ++ V+ K D Sbjct: 82207 GGQT*EHAHLAKALGVQHMVCVVTKMD 82287 >gi|340501044|gb|GL984312.1| Ichthyophthirius multifiliis unplaced genomic scaffold scaff_1120509251351, whole genome shotgun sequence Length = 166975 Score = 36.6 bits (83), Expect = 0.068 Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 20/101 (19%) Frame = -1 Query: 14 LNLGILGHVDSGKTTLTRRIAEL-GSTSAFDAHATSTTTDGI------------------ 54 LNL I+GHVDSGK+TL + L G + AH + I Sbjct: 116179 LNLIIIGHVDSGKSTLIGHLCYLKGLIDSK*AHKNEKESKNIGKESFKYAWANDEFDAER 116000 Query: 55 -RRNTLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAAST 94 R T+D+GF + + + + +D PGH + ++ +T Sbjct: 115999 *RGVTIDIGFKVLYT-KNKIITFLDAPGHKDFVPNMI*GAT 115880 >gi|340503223|gb|GL984102.1| Ichthyophthirius multifiliis unplaced genomic scaffold scaff_1120509251140, whole genome shotgun sequence Length = 107760 Score = 33.5 bits (75), Expect = 0.58 Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 1/62 (1%) Frame = -1 Query: 76 LIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEHLLLASKFCPN-RVIIVLNK 134 LID PGH V +A + D +++++DV+ G+ T + +L + + I+VLNK Sbjct: 44682 LIDSPGHVEFSSEVSSALRLTDGSLILVDVIEGVSS*T--YTVLKQSYTEKVKSILVLNK 44509 Query: 135 CD 136 D Sbjct: 44508 ID 44503 >gi|340505879|gb|GL983770.1| Ichthyophthirius multifiliis unplaced genomic scaffold scaff_1120509250761, whole genome shotgun sequence Length = 47688 Score = 32.3 bits (72), Expect = 1.3 Identities = 15/34 (44%), Positives = 20/34 (58%) Frame = +3 Query: 76 LIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGI 109 LID PGH V AA V D A+V++D + G+ Sbjct: 9858 LIDSPGHVDFSSEVTAALRVTDGALVVVDCIEGV 9959 >gi|340508198|gb|GL983251.1| Ichthyophthirius multifiliis unplaced genomic scaffold scaff_1120509249757, whole genome shotgun sequence Length = 11774 Score = 32.3 bits (72), Expect = 1.3 Identities = 32/136 (23%), Positives = 55/136 (40%), Gaps = 14/136 (10%) Frame = +2 Query: 15 NLGILGHVDSGKTTLTRRIAELGSTSAF-DAHATSTTTD----------GIRRNTLDLGF 63 N+ I+GH+ GKT L A+ + F D + TD I+ + L Sbjct: 5666 NVAIVGHLHHGKTGLMDIFAK*THPNRFLDLNRDYKYTDARKDE*ERLISIKSMPMSLVL 5845 Query: 64 STMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEHLLLASKF 123 + L ++D PGH V A + D ++++D V G+ T + K+ Sbjct: 5846 PDLRE-KNYLLNILDTPGHPNFSDEVCCALRMCDGIVLVVDAVEGVMLGTERII----KY 6010 Query: 124 CPNR---VIIVLNKCD 136 C + +++NK D Sbjct: 6011 CVKERIYITVLINKID 6058 >gi|340500110|gb|GL984391.1| Ichthyophthirius multifiliis unplaced genomic scaffold scaff_1120509251430, whole genome shotgun sequence Length = 60684 Score = 32.0 bits (71), Expect = 1.7 Identities = 12/19 (63%), Positives = 15/19 (78%) Frame = +3 Query: 15 NLGILGHVDSGKTTLTRRI 33 N+GI H+DSGKTT T R+ Sbjct: 49236 NIGISAHIDSGKTTFTERV 49292 Score = 30.0 bits (66), Expect = 6.4 Identities = 21/61 (34%), Positives = 30/61 (49%) Frame = +1 Query: 76 LIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEHLLLASKFCPNRVIIVLNKC 135 ++D PGH L V A V D +++I VAG+ P T ++ RVI + NK Sbjct: 49495 IMDTPGHVDLTIEVERALRVLDGGVLLICGVAGV*P*TLTVFK*MQRYSVPRVIFI-NKL 49671 Query: 136 D 136 D Sbjct: 49672 D 49674 >gi|340502308|gb|GL984194.1| Ichthyophthirius multifiliis unplaced genomic scaffold scaff_1120509251233, whole genome shotgun sequence Length = 124678 Score = 31.2 bits (69), Expect = 2.9 Identities = 11/19 (57%), Positives = 16/19 (84%) Frame = +2 Query: 15 NLGILGHVDSGKTTLTRRI 33 N+GI+ H+D+GKTT T R+ Sbjct: 13520 NIGIIAHIDAGKTTTTERM 13576 Database: I.multifiliis_strain_G5/genome.fa Posted date: Nov 21, 2011 7:46 PM Number of letters in database: 48,799,969 Number of sequences in database: 2017 Lambda K H 0.322 0.138 0.404 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 17,267,163 Number of Sequences: 2017 Number of extensions: 190281 Number of successful extensions: 580 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 45 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 514 Number of HSP's gapped (non-prelim): 79 length of query: 500 length of database: 16,266,656 effective HSP length: 107 effective length of query: 393 effective length of database: 16,050,837 effective search space: 6307978941 effective search space used: 6307978941 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 64 (29.3 bits)