TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SPP00000085_1.0 # Protein # Eukaryotic elongation factor (eEFSec) # Caenorhabditis elegans # Complete (500 letters) Database: D.discoideum_AX4/genome.fa 6 sequences; 33,943,072 total letters Searching......done Score E Sequences producing significant alignments: (bits) Value gi|93569114|gb|CM000150.2| Dictyostelium discoideum AX4 chromoso... 155 5e-38 gi|93569069|gb|CM000154.2| Dictyostelium discoideum AX4 chromoso... 93 6e-19 gi|93569092|gb|CM000152.2| Dictyostelium discoideum AX4 chromoso... 55 1e-07 gi|256541943|gb|CM000151.3| Dictyostelium discoideum AX4 chromos... 55 1e-07 gi|93569080|gb|CM000153.2| Dictyostelium discoideum AX4 chromoso... 49 7e-06 gi|93569058|gb|CM000155.2| Dictyostelium discoideum AX4 chromoso... 44 3e-04 >gi|93569114|gb|CM000150.2| Dictyostelium discoideum AX4 chromosome 1, whole genome shotgun sequence Length = 4923596 Score = 155 bits (393), Expect = 5e-38 Identities = 103/347 (29%), Positives = 167/347 (48%), Gaps = 37/347 (10%) Frame = +3 Query: 15 NLGILGHVDSGKTTLTRRIAELGSTSAFDAHATSTTTDGIRRNTLDLGFSTMTSLSGR-- 72 N+GI+GHVDSGKT+L + ++ ST++ D S R TLDLGFS+ + Sbjct: 4735710 NIGIMGHVDSGKTSLAKALSTNLSTASLDKSPASQE----RGITLDLGFSSFQIKKDKLA 4735877 Query: 73 -------------RLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEHLLL 119 ++ L+DCPGH+ LI+ ++ S + DM ++ID+V GIQ QTAE +++ Sbjct: 4735878 ENNNNNNDNNNNIQITLVDCPGHASLIKTIIGGSQIIDMMFLVIDIVKGIQTQTAECIVI 4736057 Query: 120 ASKFCPNRVIIVLNKCDLXXXXXXXXXXXXV----RKGLK------------------SM 157 C + II+LNK D V RK L+ S Sbjct: 4736058 GEITC-KKGIIILNKIDQIPVESRKEKIEQVSSKLRKALEKTCFKDSLIIPFSATGGSSS 4736234 Query: 158 GVDENSPIVEMSLADGYFKEEMLQNLKLAIESRIFEPKRDEEGEFLIAIDHCFAIKGQGT 217 G NS +E + +E+L + + PKR+ +G+ L DHCF IKGQGT Sbjct: 4736235 GGGSNSNKIE-PIGIDLLTKELLNFINI--------PKREAKGDLLFEFDHCFQIKGQGT 4736387 Query: 218 VLTGTVIRGVLRLNTEIEFPALNEKRRVKTLETWKXXXXXXXXXXXXXFLVAPSFDEHRF 277 +LTGTV+RG + +N I+ P LN +++VK+++ + + D Sbjct: 4736388 ILTGTVLRGSIEVNQIIQIPQLNIEKKVKSMQMFHKPIKKAIQGDRVGVCIT-QLDSSLL 4736564 Query: 278 SRCICGPLGTLKSTKFVLATVEPIQFFRKSINSKSKIHVAVAFETVM 324 R + ++ L ++E ++F+++ +NSK + H+ + TV+ Sbjct: 4736565 ERGLVCSNNSIPLLSSALISIEKVRFYKQQVNSKQQFHITIGHSTVI 4736705 Score = 61.2 bits (147), Expect = 2e-09 Identities = 66/275 (24%), Positives = 107/275 (38%), Gaps = 39/275 (14%) Frame = -2 Query: 14 LNLGILGHVDSGKTTLT-------------------RRIAELGSTSAFDAHATSTTTDGI 54 +N+ ++GHVD+GK+T T + +E+G S A Sbjct: 2797084 INIVVIGHVDAGKSTTTGHLIYKCGGIDKRVIEKYEKEASEMGKQSFKYAWVMDKLKAER 2796905 Query: 55 RRN-TLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAG 108 R T+D+ + S +ID PGH I+ ++ ++ D A+++I + AG Sbjct: 2796904 ERGITIDIALWKFET-SKYYFTIIDAPGHRDFIKNMITGTSQADCAVLVIASPTGEFEAG 2796728 Query: 109 IQP--QTAEHLLLASKFCPNRVIIVLNKCDLXXXXXXXXXXXXVRKGLKSM--GVDENSP 164 I QT EH LLA ++I+ +NK D + K + S + N Sbjct: 2796727 IAKNGQTREHALLAYTLGVKQMIVAINKMDEKSTNYSQARYDEIVKEVSSFIKKIGYNPE 2796548 Query: 165 IVEMSLADGYFKEEMLQNLK----------LAIESRIFEPKRDEEGEFLIAIDHCFAIKG 214 V G+ + ML+ L I EPKR + I + + I G Sbjct: 2796547 KVAFVPISGWNGDNMLERSDKMEWYKGPTLLEALDAIVEPKRPHDKPLRIPLQDVYKIGG 2796368 Query: 215 QGTVLTGTVIRGVLRLNTEIEFPALNEKRRVKTLE 249 GTV G V G+++ + F VK++E Sbjct: 2796367 IGTVPVGRVETGIIKPGMVVTFAPAGLSTEVKSVE 2796263 Score = 53.9 bits (128), Expect = 3e-07 Identities = 49/193 (25%), Positives = 78/193 (40%), Gaps = 19/193 (9%) Frame = -3 Query: 76 LIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQP--QTAEHLLLASKFCPNRV 128 +ID PGH I+ ++ ++ D A+++I + AGI QT EH LLA ++ Sbjct: 2432862 IIDAPGHRDFIKNMITGTSQADCAVLVIASPTGEFEAGIAKNGQTREHALLAYTLGVKQM 2432683 Query: 129 IIVLNKCDLXXXXXXXXXXXXVRKGLKSM--GVDENSPIVEMSLADGYFKEEMLQNLK-- 184 I+ +NK D + K + S + N V G+ + ML+ Sbjct: 2432682 IVAINKMDEKSTNYSQARYDEIVKEVSSFIKKIGYNPEKVAFVPISGWNGDNMLERSDKM 2432503 Query: 185 --------LAIESRIFEPKRDEEGEFLIAIDHCFAIKGQGTVLTGTVIRGVLRLNTEIEF 236 L I EPKR + I + + I G GTV G V G+++ + F Sbjct: 2432502 EWYKGPTLLEALDAIVEPKRPHDKPLRIPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTF 2432323 Query: 237 PALNEKRRVKTLE 249 VK++E Sbjct: 2432322 APAGLSTEVKSVE 2432284 Score = 51.6 bits (122), Expect = 1e-06 Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 6/128 (4%) Frame = -2 Query: 15 NLGILGHVDSGKTTLTRRIAELGST--SAFDAHATSTTTDGI---RRNTLDLGFSTMT-S 68 N+GI+ HVD+GKTT R+ + H T D + R + +G +T+T Sbjct: 808981 NIGIIAHVDAGKTTTCERMLYYSGLIKRIGEVHKGDTIMDYMKLERERGITIGAATVTIP 808802 Query: 69 LSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEHLLLASKFCPNRV 128 + R+ ++D PGH V + V D + I D VAG+Q Q+ A ++ R+ Sbjct: 808801 WNDHRINIVDTPGHVDFTVEVERSVRVIDGGVAIFDGVAGVQAQSITVWNQAERYKVPRI 808622 Query: 129 IIVLNKCD 136 + NK D Sbjct: 808621 AFI-NKMD 808601 Score = 49.7 bits (117), Expect = 6e-06 Identities = 39/134 (29%), Positives = 58/134 (43%), Gaps = 9/134 (6%) Frame = +2 Query: 12 GPLNLGILGHVDSGKTTLTRRIAELGSTSAFDAHATSTTTDGIRRNTLDL---------G 62 G N+GI H+DSGKTTLT RI G + +++DL Sbjct: 2561675 GLRNIGISAHIDSGKTTLTERILYYTGRIKEIHEVRGKDGVGAKMDSMDLEREKGITIQS 2561854 Query: 63 FSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEHLLLASK 122 +T + +ID PGH V A V D A++++ V+G+Q QT + Sbjct: 2561855 AATYCKWGENHINIIDTPGHVDFTIEVERALRVLDGAVLVMCGVSGVQSQTITVDRQMRR 2562034 Query: 123 FCPNRVIIVLNKCD 136 + RV+ + NK D Sbjct: 2562035 YNVPRVVFI-NKLD 2562073 Score = 30.8 bits (68), Expect = 2.7 Identities = 11/38 (28%), Positives = 24/38 (63%) Frame = +2 Query: 428 MFKAETNFDVFRGFQICTSSGPRGKIEGAFGKSGKFRV 465 +FK +++ F G ++ +G G ++ +FGK+GK ++ Sbjct: 4737218 LFKKDSDISSFIGMKVLFETGEIGILDSSFGKTGKVKI 4737331 >gi|93569069|gb|CM000154.2| Dictyostelium discoideum AX4 chromosome 5, whole genome shotgun sequence Length = 5125352 Score = 92.8 bits (229), Expect = 6e-19 Identities = 66/235 (28%), Positives = 117/235 (49%), Gaps = 14/235 (5%) Frame = -1 Query: 14 LNLGILGHVDSGKTTLTRRIAELGSTSA---FDAHATSTTTDGIRRNTLDLGFSTMTSLS 70 +N+G +GHVD GKTTLT I + S F ++A + + + + S + S Sbjct: 2978681 VNVGTIGHVDHGKTTLTAAITKTLSDRGLANFKSYAQIDKSPEEKARGITITASHIEYES 2978502 Query: 71 G-RRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEHLLLASKFCPNRVI 129 R A IDCPGH I+ ++ + D AI+++ G Q QT EH++L+ + ++ Sbjct: 2978501 ATRHYAHIDCPGHQHYIKNMITGAAQMDGAILVVSAPDGPQEQTREHIILSREVGIPALV 2978322 Query: 130 IVLNKCDLXXXXXXXXXXXXVRKGLKSMGVD-ENSPIVE----MSLAD-----GYFKEEM 179 + LNK D VR+ L G + + +P V+ ++LA+ + + Sbjct: 2978321 VFLNKMDNADPDLVEIVEMEVRELLSQYGFNGDETPFVKGAAAVALAETNETATQYGRKA 2978142 Query: 180 LQNLKLAIESRIFEPKRDEEGEFLIAIDHCFAIKGQGTVLTGTVIRGVLRLNTEI 234 + L ++++I P R + FL+ ++ F+I G+GTV TG + +G L++ E+ Sbjct: 2978141 IDELVEVLDTKIPLPHRAVDKPFLMPVEEVFSISGRGTVATGRIEQGTLKVGEEV 2977977 Score = 42.7 bits (99), Expect = 7e-04 Identities = 40/142 (28%), Positives = 62/142 (43%), Gaps = 20/142 (14%) Frame = +1 Query: 15 NLGILGHVDSGKTTLT----RRIAELGSTSAFDAHATSTTTDG------IRRNTLDLGFS 64 N+ ++ HVD GKTTL+ +R + + D S D I+ +++ L F Sbjct: 1470679 NMSVIAHVDHGKTTLSDSLIQRAGIIADKVSGDMRYMSCRADEQERGITIKSSSVSLHFE 1470858 Query: 65 TMT--------SLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAG--IQPQTA 114 + + LID PGH V AA V D A+V+ID V G +Q +T Sbjct: 1470859 MPKEDKLPAGCTSHEFLINLIDSPGHVDFSSEVTAALRVTDGALVVIDCVEGVCVQTETV 1471038 Query: 115 EHLLLASKFCPNRVIIVLNKCD 136 +A + P ++ +NK D Sbjct: 1471039 LRQAVAERIKP---VLFVNKVD 1471095 Score = 38.5 bits (88), Expect = 0.013 Identities = 41/135 (30%), Positives = 59/135 (43%), Gaps = 20/135 (14%) Frame = -1 Query: 22 VDSGKTTLT----RRIAELGSTSAFDAHATSTTTDG------IRRNTLDLGFS------- 64 VD GKTTLT +R + + +A S D I+ +++ L F Sbjct: 692387 VDHGKTTLTDSLIQRAGIIADKVSGNAGYMSCRPDEQLRGITIKSSSVSLHFEMPKDEKL 692208 Query: 65 -TMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAG--IQPQTAEHLLLAS 121 T S + LID PGH V AA V D A+V+ID V G +Q +T +A Sbjct: 692207 PTGCSSHEFLINLIDSPGHVDFSSEVTAALRVTDGALVVIDCVEGVCVQTETVLRQAMAE 692028 Query: 122 KFCPNRVIIVLNKCD 136 + P ++ +NK D Sbjct: 692027 RIKP---VLFVNKVD 691992 >gi|93569092|gb|CM000152.2| Dictyostelium discoideum AX4 chromosome 3, whole genome shotgun sequence Length = 6357299 Score = 55.5 bits (132), Expect = 1e-07 Identities = 43/129 (33%), Positives = 59/129 (45%), Gaps = 10/129 (7%) Frame = -2 Query: 18 ILGHVDSGKTTLTRRIAELGSTSAFDAHATSTT---------TDGIRRNTLDLGFSTMTS 68 ILGHVD+GKT+L +I +T+ A T D I+ T Sbjct: 1233748 ILGHVDTGKTSLLDKIR---NTNVQGGEARGITQQIGASFIPVDAIKEQTKSFAEKIKMD 1233578 Query: 69 LSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEHL-LLASKFCPNR 127 L LID PGH S + D+AI++ID++ G+Q QT E + LL + P Sbjct: 1233577 FKLPGLLLIDTPGHESFNNLRSRGSGLCDLAILVIDIMHGLQAQTLESINLLRMRKTP-- 1233404 Query: 128 VIIVLNKCD 136 I+ LNK D Sbjct: 1233403 FIVALNKVD 1233377 Score = 48.1 bits (113), Expect = 2e-05 Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 12/167 (7%) Frame = -2 Query: 81 GHSGLIRAVLAASTVFDMAIVIIDVVAGI-QPQTAEHLLLASKFCPNRVIIVLNKCDLXX 139 GH L+ +L + V D A+++I QPQT+EH+ +II+ NK DL Sbjct: 1530337 GHDVLMATMLNGAAVMDAALLLIAGNESCPQPQTSEHIAAIEIMNLKNIIILQNKIDLVK 1530158 Query: 140 XXXXXXXXXXVRKGLKSMGVDENSPIVEMSLADGYFKEEMLQNLKLAIE---SRIFEPKR 196 + K ++ + EN+PI+ +S +M N+ + E +I P R Sbjct: 1530157 EAAAQEQYGQILKFIQGT-IAENAPIIPIS-------AQMKYNIDVICEYIVKKIPIPVR 1530002 Query: 197 DEEGEFLIAIDHCFAIKGQGT--------VLTGTVIRGVLRLNTEIE 235 D + + + F + G+ V G++++GVL++ EIE Sbjct: 1530001 DFTSDPRMIVIRSFDVNKPGSRVDEIKGGVAGGSILKGVLKIGDEIE 1529861 Score = 43.9 bits (102), Expect = 3e-04 Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 28/151 (18%) Frame = -1 Query: 14 LNLGILGHVDSGKTTLTRRIAELGSTSAFDAHATSTTTDGIRRN---------------- 57 LN+ LGHVD+GK+TL+ I L T D H + + N Sbjct: 856580 LNIVFLGHVDAGKSTLSGSIMVL--TGQVDPHTLAKYEREAKENHREGWIYAYIMDTNEE 856407 Query: 58 ------TLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVV 106 T+++G + + + +R ++D PGH + ++ + D+ I++I + Sbjct: 856406 ERTKGKTVEVGRAHFET-TKKRYTILDAPGHRLYVPNMIIGAAQADVGILVISSKKGEFE 856230 Query: 107 AGIQ-PQTAEHLLLASKFCPNRVIIVLNKCD 136 AG++ QT EH LA +++ +NK D Sbjct: 856229 AGVEGGQTIEHARLAKMIGIKYLVVFVNKMD 856137 Score = 41.2 bits (95), Expect = 0.002 Identities = 38/139 (27%), Positives = 59/139 (42%), Gaps = 17/139 (12%) Frame = -1 Query: 15 NLGILGHVDSGKTTLTRRIAELGSTSAFDAHATSTTTDGI----------RRNTLDLGFS 64 N+ +L HVD GKTTL+ + + + D + + + + L F Sbjct: 2449556 NICVLAHVDHGKTTLSDCLISSNGIISPEMAGKLRYLDFLEDEQEREITMKASAISLLFQ 2449377 Query: 65 TMTSLSGRR------LALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEHLL 118 +S S + LID PGH V A + D A+V++D V G+ QT H + Sbjct: 2449376 QPSSSSSSNDKESFLINLIDSPGHVDFSSEVSTAVRITDGALVLVDAVEGVCIQT--HAV 2449203 Query: 119 LASKFCPN-RVIIVLNKCD 136 L + + +VLNK D Sbjct: 2449202 LKQAYQEKVKPCLVLNKID 2449146 >gi|256541943|gb|CM000151.3| Dictyostelium discoideum AX4 chromosome 2, whole genome shotgun sequence Length = 8484197 Score = 55.5 bits (132), Expect = 1e-07 Identities = 54/215 (25%), Positives = 97/215 (45%), Gaps = 1/215 (0%) Frame = -1 Query: 18 ILGHVDSGKTTLTRRIAELGSTSAFDAHATSTTTDGIRRNTLDLGFSTMTSLSGRRLALI 77 ++GH+D GKT+L + L STS D + T I + + + + R + + Sbjct: 5861306 VVGHIDHGKTSL---LDFLRSTSVVD-NEPGRITQHIGAFEVLINDRSDAKKAKRAITFM 5861139 Query: 78 DCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEHLLLASKFCPNRVIIVLNKCDL 137 D PGHS + D+ ++++ G+Q QT E + A K +VI+V+NK D Sbjct: 5861138 DTPGHSAFSTMRERGVGITDIVLLVVAADDGVQEQTIE-AIKAIKKNDVQVIVVINKMDK 5860962 Query: 138 XXXXXXXXXXXXVRKGLKSMGVDENSPIVEMSLADGYFKEEMLQN-LKLAIESRIFEPKR 196 + G+ GV + P VE+S G + + + L + + P + Sbjct: 5860961 PDANPELVKMELLENGIACEGVGGDVPCVEISAKTGMGIQTLEETILFIGDMMELKAPVK 5860782 Query: 197 DEEGEFLIAIDHCFAIKGQGTVLTGTVIRGVLRLN 231 D + ++ I+ F + +GT T V +G+L++N Sbjct: 5860781 DVQVSGVV-IETSFK-RNRGTYSTILVQKGILKIN 5860683 Score = 42.0 bits (97), Expect = 0.001 Identities = 31/125 (24%), Positives = 57/125 (45%), Gaps = 3/125 (2%) Frame = +1 Query: 15 NLGILGHVDSGKTTLT-RRIAELGSTSAFDAHATSTTTDGI--RRNTLDLGFSTMTSLSG 71 N+ I+ HVD GKT+L + + + G+ A + ++ + R + T Sbjct: 6257011 NVAIIAHVDHGKTSLVDQLLRQSGAIKATEKDERVMDSNALEKERGITIMAKCTSFDYKN 6257190 Query: 72 RRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEHLLLASKFCPNRVIIV 131 +L ++D PGH V ++ D ++++D G QT + +L + R I+V Sbjct: 6257191 HKLNIVDTPGHGDFGGEVERVLSMVDGVVLLVDATEGPMAQT-KFVLSKALSQGLRPIVV 6257367 Query: 132 LNKCD 136 +NK D Sbjct: 6257368 INKLD 6257382 >gi|93569080|gb|CM000153.2| Dictyostelium discoideum AX4 chromosome 4, whole genome shotgun sequence Length = 5450249 Score = 49.3 bits (116), Expect = 7e-06 Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 25/148 (16%) Frame = +2 Query: 14 LNLGILGHVDSGKTTLTRRIA-------------------ELGSTSAFDAHATSTTTDGI 54 LN+ ++GHVD+GK+T I +G +S A + Sbjct: 1140359 LNMVVIGHVDAGKSTTMGHILFKLGYVDKRTMSKFENESNRMGKSSFHFAWVLDEQEEER 1140538 Query: 55 RRN-TLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVII---DVVAGI- 109 R T+D+ + RR+ L+D PGH I +++ +T D+AI++I + AG Sbjct: 1140539 ERGVTMDVCVRYFET-EHRRITLLDAPGHRDFIPNMISGTTQADVAILLINASEFEAGFS 1140715 Query: 110 -QPQTAEHLLLASKFCPNRVIIVLNKCD 136 + QT EH LLA +I+ +NK D Sbjct: 1140716 AEGQTKEHALLAKSLGIMELIVAVNKMD 1140799 Score = 39.3 bits (90), Expect = 0.007 Identities = 20/61 (32%), Positives = 35/61 (57%) Frame = -3 Query: 76 LIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEHLLLASKFCPNRVIIVLNKC 135 ++D PGH + V A+ + D+A++IID + G+ QT E L+ + + +V+NK Sbjct: 571503 ILDTPGHPNFLDEVTASIALSDIAVIIIDALEGVMMQT-ERLIKHAVAEGLSICVVINKM 571327 Query: 136 D 136 D Sbjct: 571326 D 571324 Score = 30.0 bits (66), Expect = 4.5 Identities = 20/84 (23%), Positives = 38/84 (45%) Frame = -1 Query: 314 IHVAVAFETVMAECQFLKEKENGEFEMLPSLLAPCQVLFSFEKSIFLPENYSNPFMAARL 373 I ++F+ + + + +KE G +LP L KSI + ++N + ++ Sbjct: 3272915 IEFGISFDQYLIQFKNDIKKEEGLISILPISL----------KSIIFGQKFNNGNKSIKV 3272766 Query: 374 EQQPGSGCRFAFSGIFSQILPENG 397 + P + F F+QI+ ENG Sbjct: 3272765 DTFPKNVTLIEFGSTFNQIIEENG 3272694 >gi|93569058|gb|CM000155.2| Dictyostelium discoideum AX4 chromosome 6, whole genome shotgun sequence Length = 3602379 Score = 43.9 bits (102), Expect = 3e-04 Identities = 40/148 (27%), Positives = 58/148 (39%), Gaps = 25/148 (16%) Frame = +3 Query: 15 NLGILGHVDSGKTTLTRRIAELGST-------SAFDAHATSTTTDGIRRNTLD------- 60 N I+ H+D GKTTL+ ++ L T S D+ ++ R LD Sbjct: 641592 NFSIIAHIDHGKTTLSTKLLSLTGTLPKSIYGSGEDSLVQKEKSEERREQYLDKLQVEKE 641771 Query: 61 -----------LGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGI 109 + + L LID PGH V + A++++D V G+ Sbjct: 641772 RGITVKAQTCTMKYRNKEDGKDYLLNLIDTPGHVDFSYEVSRSLMACQGALLVVDAVQGV 641951 Query: 110 QPQTAEHLLLASKFCPNRVIIVLNKCDL 137 Q QT + LA VI V+NK DL Sbjct: 641952 QAQTMANYYLALD-SGLEVIPVINKIDL 642032 Score = 37.0 bits (84), Expect = 0.037 Identities = 60/259 (23%), Positives = 96/259 (37%), Gaps = 50/259 (19%) Frame = +3 Query: 20 GHVDSGKTTLT----------------------RRIAELGSTSAFDAHATSTTTDG--IR 55 G+VD+GK+TL R E G TS+ + G + Sbjct: 1636596 GNVDAGKSTLLGVLKCGVLDDGRGKARLNVFRHRHEVESGRTSSISQEIVGFDSKGKIVN 1636775 Query: 56 RNTL--DLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQT 113 NTL L S + S + + +D GH ++ L T +I V A T Sbjct: 1636776 YNTLHSSLSPSEICESSSKIITFVDLAGHEKYLKTTLFGMTSSSPDYCMIAVGANTMGAT 1636955 Query: 114 A---EHLLLA-SKFCPNRVIIVLNKCDLXXXXXXXXXXXXVRKGLKSMGVDENSPIVE-- 167 EHL +A S P V IV+ K D ++K L+ G + +++ Sbjct: 1636956 GMCKEHLGIALSLHIP--VYIVITKIDRAPENVLAATMTDIKKILRGPGARKLPVVIKNQ 1637129 Query: 168 ---MSLADGYFKEEML----------QNLKLAIESRIFEPKRDEEGEFLIA-----IDHC 209 + A + + ++ +NL L P R E + ID Sbjct: 1637130 DDVVVAARNFVSDRVVPIFTVSNVTGENLDLLRMFLNLLPARKEWESLALKPAQLDIDST 1637309 Query: 210 FAIKGQGTVLTGTVIRGVL 228 + + G GTV++GTV++GV+ Sbjct: 1637310 WNVSGVGTVVSGTVMKGVI 1637366 Database: D.discoideum_AX4/genome.fa Posted date: Nov 21, 2011 7:46 PM Number of letters in database: 33,943,072 Number of sequences in database: 6 Lambda K H 0.322 0.138 0.404 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 13,228,268 Number of Sequences: 6 Number of extensions: 149820 Number of successful extensions: 733 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 411 Number of HSP's gapped (non-prelim): 541 length of query: 500 length of database: 11,314,357 effective HSP length: 105 effective length of query: 395 effective length of database: 11,313,727 effective search space: 4468922165 effective search space used: 4468922165 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 63 (28.9 bits)