TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SPP00000085_1.0 # Protein # Eukaryotic elongation factor (eEFSec) # Caenorhabditis elegans # Complete (500 letters) Database: A.laibachii_Nc14/genome.fa 3816 sequences; 32,740,139 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|325181502|emb|FR824062.1| Albugo laibachii Nc14, genomic cont... 93 5e-19 gi|325180465|emb|FR824052.1| Albugo laibachii Nc14, genomic cont... 64 3e-10 gi|325183031|emb|FR824081.1| Albugo laibachii Nc14, genomic cont... 57 2e-08 gi|325179861|emb|FR824048.1| Albugo laibachii Nc14, genomic cont... 57 3e-08 gi|325184277|emb|FR824101.1| Albugo laibachii Nc14, genomic cont... 51 2e-06 gi|325188185|emb|FR824211.1| Albugo laibachii Nc14, genomic cont... 50 3e-06 gi|325184111|emb|FR824098.1| Albugo laibachii Nc14, genomic cont... 50 4e-06 gi|325186025|emb|FR824142.1| Albugo laibachii Nc14, genomic cont... 50 4e-06 gi|325190995|emb|FR824346.1| Albugo laibachii Nc14, genomic cont... 50 4e-06 gi|325187591|emb|FR824190.1| Albugo laibachii Nc14, genomic cont... 46 6e-05 gi|325184719|emb|FR824111.1| Albugo laibachii Nc14, genomic cont... 46 7e-05 gi|325190899|emb|FR824340.1| Albugo laibachii Nc14, genomic cont... 40 0.005 gi|325190975|emb|FR824344.1| Albugo laibachii Nc14, genomic cont... 40 0.005 gi|325191704|emb|FR824361.1| Albugo laibachii Nc14, genomic cont... 40 0.005 gi|325188022|emb|FR824204.1| Albugo laibachii Nc14, genomic cont... 39 0.007 gi|325191291|emb|FR824390.1| Albugo laibachii Nc14, genomic cont... 37 0.026 gi|325186899|emb|FR824168.1| Albugo laibachii Nc14, genomic cont... 35 0.10 gi|325181994|emb|FR824067.1| Albugo laibachii Nc14, genomic cont... 33 0.65 gi|325192485|emb|FR824474.1| Albugo laibachii Nc14, genomic cont... 32 0.85 gi|325182478|emb|FR824073.1| Albugo laibachii Nc14, genomic cont... 32 1.4 gi|325181896|emb|FR824066.1| Albugo laibachii Nc14, genomic cont... 29 9.4 >gi|325181502|emb|FR824062.1| Albugo laibachii Nc14, genomic contig CONTIG_17_NC14_v4_199494_229 Length = 199494 Score = 92.8 bits (229), Expect = 5e-19 Identities = 67/238 (28%), Positives = 114/238 (47%), Gaps = 16/238 (6%) Frame = +3 Query: 14 LNLGILGHVDSGKTTLTRRIAELGS-------TSAFDAH-ATSTTTDGIRRNTLDLGFST 65 +N+G +GHVD GKTTLT + ++ S TS D A GI +T + + T Sbjct: 130515 VNIGTIGHVDHGKTTLTAALTKVLSEKGGAKFTSYEDIDKAPEERARGITISTAHVEYET 130694 Query: 66 MTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEHLLLASKFCP 125 R A +DCPGH+ ++ ++ + D I+++ G PQT EH+LLA + Sbjct: 130695 ----EKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAGDGPMPQTREHILLARQVGV 130862 Query: 126 NRVIIVLNKCD-LXXXXXXXXXXXXVRKGL-------KSMGVDENSPIVEMSLADGYFKE 177 +++ LNK D + +R+ L + + + S + + D Sbjct: 130863 PALVVFLNKVDQVDDEELLELVEMEIRELLDLYDFPSEEIPIIRGSALAAVEGRDHPIGR 131042 Query: 178 EMLQNLKLAIESRIFEPKRDEEGEFLIAIDHCFAIKGQGTVLTGTVIRGVLRLNTEIE 235 + + L +++ I +P RD E FL+ ++ F+I G+GTV++G V GV+ E+E Sbjct: 131043 DAVLQLVEHVDNYIPDPVRDFEKPFLMPVEDVFSIAGRGTVVSGRVEHGVINAGDEVE 131216 >gi|325180465|emb|FR824052.1| Albugo laibachii Nc14, genomic contig CONTIG_7_NC14_v4_241751_227 Length = 241751 Score = 63.5 bits (153), Expect = 3e-10 Identities = 66/267 (24%), Positives = 109/267 (40%), Gaps = 45/267 (16%) Frame = +2 Query: 14 LNLGILGHVDSGKTTLTRRIAE---------------------------------LGSTS 40 +N+G +GHV GK+T+ + I+ +G Sbjct: 139007 INIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKKENENGIGCYR 139186 Query: 41 AFDAHATSTTTDGIRRNTLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAI 100 AF + T D + + L R ++ +DCPGH L+ +L + V D A+ Sbjct: 139187 AFGSSKPDTFVDEVDQKKWVLQ---------RHVSFVDCPGHDILMATMLNGAAVMDAAL 139339 Query: 101 VIIDVVAG----IQPQTAEHLLLASKFCPNRVIIVLNKCDLXXXXXXXXXXXXVRKGLKS 156 ++ VAG QPQT+EHL +II+ NK DL ++K + Sbjct: 139340 LL---VAGNEVCPQPQTSEHLAAIEIMRLQNIIILQNKVDLIKEDVAVAQHEQIKKFVAG 139510 Query: 157 MGVDENSPIVEMSLADGYFKEEMLQNLKLAIESRIFEPKRDEEGEFLIAIDHCFAIKG-- 214 V ++PI+ +S Y + + + I I PKRD + + + F + Sbjct: 139511 T-VAHDAPIIPISAVLKYNIDVVCE----YIVRNIPIPKRDFTSKPKLIVIRSFDVNKPG 139675 Query: 215 ------QGTVLTGTVIRGVLRLNTEIE 235 +G V G++++GVLR+N EIE Sbjct: 139676 EDVENLKGGVAGGSILQGVLRVNDEIE 139756 >gi|325183031|emb|FR824081.1| Albugo laibachii Nc14, genomic contig CONTIG_36_NC14_v4_137019_239 Length = 137019 Score = 57.4 bits (137), Expect = 2e-08 Identities = 42/127 (33%), Positives = 62/127 (48%), Gaps = 8/127 (6%) Frame = +2 Query: 18 ILGHVDSGKTTLTRRI-------AELGSTSAFDAHATSTTTDGIRRNTLDLGFSTMTSLS 70 I+GHVD+GKT L I E G + AT + I++ T L + Sbjct: 44357 IMGHVDTGKTKLLDNIRRTKVQDGEAGGITQ-QIGATFFPVEAIKQRTERLAKTMKLEYR 44533 Query: 71 GRRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEHL-LLASKFCPNRVI 129 L +ID PGH +++ D+AI+++D++ G++PQT E L LL K P I Sbjct: 44534 LPGLLVIDTPGHESFTNLRSRGTSLCDIAILVVDIMHGLEPQTLESLRLLRQKKAP--FI 44707 Query: 130 IVLNKCD 136 + LNK D Sbjct: 44708 VALNKID 44728 >gi|325179861|emb|FR824048.1| Albugo laibachii Nc14, genomic contig CONTIG_3_NC14_v4_366484_228 Length = 366484 Score = 57.0 bits (136), Expect = 3e-08 Identities = 40/128 (31%), Positives = 64/128 (50%), Gaps = 6/128 (4%) Frame = -3 Query: 15 NLGILGHVDSGKTTLTRRIAELGST--SAFDAHATSTTTDGI---RRNTLDLGFSTMT-S 68 N+GIL H+D+GKTT T R+ + H TT D + R+ + +G + ++ Sbjct: 171731 NIGILAHIDAGKTTTTERMLFYSGVIHKMGEVHDGDTTMDYMPQERQRGITIGAAAISFP 171552 Query: 69 LSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEHLLLASKFCPNRV 128 + +ID PGH V A V D +I +ID VAG++ QT A+++ R+ Sbjct: 171551 WRSTNVNVIDTPGHVDFTVEVERAVRVLDGSIAVIDGVAGVEAQTETVWEQANRYAVPRI 171372 Query: 129 IIVLNKCD 136 + + NK D Sbjct: 171371 VFI-NKMD 171351 >gi|325184277|emb|FR824101.1| Albugo laibachii Nc14, genomic contig CONTIG_56_NC14_v4_108009_226 Length = 108009 Score = 50.8 bits (120), Expect = 2e-06 Identities = 53/225 (23%), Positives = 94/225 (41%), Gaps = 6/225 (2%) Frame = +1 Query: 11 VGPLNLGILGHVDSGKTTLTRRIAELGSTSAFDAHATSTTTDGIRRNTLDLGFSTMTSLS 70 V P + ++GHVD GKTTL + + T++ + T G L F ++++ Sbjct: 84046 VRPPVVCVMGHVDHGKTTLLDTLRKSNVTAS--EYGGITQKIGAFSVNLGKSFGEQSTMT 84219 Query: 71 GRRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEHLLLASK--FCPNRV 128 +D PGHS DM ++I+ GIQ QT E + A K C + Sbjct: 84220 -----FLDTPGHSVFSGMRSRGVEATDMILLIVAADDGIQSQTIEVVEQAVKNGIC---M 84375 Query: 129 IIVLNKCDL----XXXXXXXXXXXXVRKGLKSMGVDENSPIVEMSLADGYFKEEMLQNLK 184 I+ + KCD+ ++ G+ + + ++P++ +S G + + + + Sbjct: 84376 IVAITKCDMHGSDEQEAVQRISAQLMKYGVTTENLGGDTPVICVSGKTGDGLDLLKETIA 84555 Query: 185 LAIESRIFEPKRDEEGEFLIAIDHCFAIKGQGTVLTGTVIRGVLR 229 L E + D +GE ++ +G GT + V G LR Sbjct: 84556 LHTEMKDLRADHDAKGEAIVL--EAQVARGAGTQVDAVVKWGTLR 84684 >gi|325188185|emb|FR824211.1| Albugo laibachii Nc14, genomic contig CONTIG_166_NC14_v4_56190_229 Length = 56190 Score = 50.4 bits (119), Expect = 3e-06 Identities = 61/277 (22%), Positives = 104/277 (37%), Gaps = 41/277 (14%) Frame = +3 Query: 14 LNLGILGHVDSGKTTLTRRIA------ELGSTSAFDAHATSTTTDGI------------- 54 ++L ++GHVD+GK+T T + + + F+ A Sbjct: 3405 ISLVVIGHVDAGKSTTTGHLIYKCGGIDKRTIEKFEKEAAQLNKSSFKYAWVVDKLKAER 3584 Query: 55 -RRNTLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAG 108 R T+D+ +ID PGH I+ ++ ++ D +I+ I + AG Sbjct: 3585 ERGITIDIALWKFEGCC-HSFTVIDAPGHRDFIKNMITGTSQADASILCIASGVGEFEAG 3761 Query: 109 I--QPQTAEHLLLASKFCPNRVIIVLNKCD----LXXXXXXXXXXXXVRKGLKSMGVDEN 162 I + QT EH LLA ++++ +NK D V L +G N Sbjct: 3762 ISKEGQTREHALLAFTLGVKQMVVAVNKMDDASVKYSQSRFDEIVTEVGTYLTKIGYKAN 3941 Query: 163 SPIVEMSLADGYFKEEMLQNLK----------LAIESRIFEPKRDEEGEFLIAIDHCFAI 212 M G+ + M++ L ++ PKR + + + + I Sbjct: 3942 K--CTMIPISGWCGDNMIEKSSNMPWYKGPTLLEALDKLVPPKRPTDKPLRLPLQDVYKI 4115 Query: 213 KGQGTVLTGTVIRGVLRLNTEIEFPALNEKRRVKTLE 249 G GTV G V GVL+ + F + VK++E Sbjct: 4116 GGIGTVPVGRVETGVLKPGMVVTFGPVGLTTEVKSVE 4226 Score = 49.3 bits (116), Expect = 7e-06 Identities = 53/225 (23%), Positives = 96/225 (42%), Gaps = 10/225 (4%) Frame = -1 Query: 12 GPLNLGILGHVDSGKTTLTRRIAELGSTSAFDAHATSTTTDGIRRNTLDLGFSTMTSLSG 71 GP+ + ++GHVD GKTTL + E + S+ +GI T + + G Sbjct: 7464 GPV-IAVMGHVDHGKTTLMDSLRE-------HSFIASSEREGI---TQKINVCEASLEDG 7318 Query: 72 RRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQT------AEHLLLASKFCP 125 + +D PGH R +A+ V D+ ++++ V G QT E + + S C Sbjct: 7317 IKATFLDTPGHFHFFRMRTSAAQVADIILLVVAVDEGCLLQTEESIGCIEEMNIPSVVCI 7138 Query: 126 NRVIIVLNKCDLXXXXXXXXXXXXVRKGLKSMGVDENSPIVEMSLADGYFKEEMLQNLKL 185 N++ + + D V + LKS +++P++ +S +K + L Sbjct: 7137 NKMDVFASNGDDHEQEQSKSVVDRVTQQLKSFVALQDTPVIPIS---AKYKLNL-----L 6982 Query: 186 AIESRIFEPKRDEEGEFLIAIDHCFAIK----GQGTVLTGTVIRG 226 +++ I + + EG+ L ++ I+ QG VL RG Sbjct: 6981 GLKNEIVKITKTLEGDALSSVQTYVGIQEQVIPQGIVLESVKERG 6847 >gi|325184111|emb|FR824098.1| Albugo laibachii Nc14, genomic contig CONTIG_53_NC14_v4_112287_155 Length = 112287 Score = 50.1 bits (118), Expect = 4e-06 Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 27/150 (18%) Frame = +3 Query: 14 LNLGILGHVDSGKTTLTRRIAEL------GSTSAFDAHATSTTTDGI------------- 54 LN+ ++GHVD+GK+TL+ I L + ++ A + + + Sbjct: 13506 LNVVLIGHVDAGKSTLSGNILYLMGMVDKRTIERYEKEAKARSRESWFLSFIMDTGEEER 13685 Query: 55 -RRNTLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQP-- 111 + T+++G + + RR ++D PGH + ++ ++ D+ I++I G Sbjct: 13686 EKGKTIEVGRAHFET-ENRRYTILDAPGHKTYVPNMIQGASQADIGILVISARKGEFETG 13862 Query: 112 -----QTAEHLLLASKFCPNRVIIVLNKCD 136 QT EH LLA N++++V+NK D Sbjct: 13863 FERGGQTREHALLAKTLGINKLVVVINKMD 13952 >gi|325186025|emb|FR824142.1| Albugo laibachii Nc14, genomic contig CONTIG_97_NC14_v4_80307_117 Length = 80307 Score = 50.1 bits (118), Expect = 4e-06 Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 27/150 (18%) Frame = +1 Query: 14 LNLGILGHVDSGKTTLTRRIAEL------GSTSAFDAHATSTTTDGI------------- 54 LN+ ++GHVD+GK+TL+ I L + ++ A + + + Sbjct: 13288 LNVVLIGHVDAGKSTLSGNILYLMGMVDKRTIERYEKEAKARSRESWFLSFIMDTGEEER 13467 Query: 55 -RRNTLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQP-- 111 + T+++G + + RR ++D PGH + ++ ++ D+ I++I G Sbjct: 13468 EKGKTIEVGRAHFET-ENRRYTILDAPGHKTYVPNMIQGASQADIGILVISARKGEFETG 13644 Query: 112 -----QTAEHLLLASKFCPNRVIIVLNKCD 136 QT EH LLA N++++V+NK D Sbjct: 13645 FERGGQTREHALLAKTLGINKLVVVINKMD 13734 >gi|325190995|emb|FR824346.1| Albugo laibachii Nc14, genomic contig CONTIG_301_NC14_v4_31381_247 Length = 31381 Score = 50.1 bits (118), Expect = 4e-06 Identities = 32/122 (26%), Positives = 55/122 (45%) Frame = -3 Query: 15 NLGILGHVDSGKTTLTRRIAELGSTSAFDAHATSTTTDGIRRNTLDLGFSTMTSLSGRRL 74 NL I+ HVD GKTTL ++ + G + A + R + T G L Sbjct: 2870 NLAIVAHVDHGKTTLVDQLLKQGGNMVLEERAMDSIELERERGITIMSKCTRIEYEGHVL 2691 Query: 75 ALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEHLLLASKFCPNRVIIVLNK 134 ++D PGH+ V ++ D ++++D G QT + +L + + ++V+NK Sbjct: 2690 NIVDTPGHADFGGEVERILSMVDGVVLVVDATEGPMSQT-KFVLTKALQRGLKPLVVINK 2514 Query: 135 CD 136 D Sbjct: 2513 VD 2508 >gi|325187591|emb|FR824190.1| Albugo laibachii Nc14, genomic contig CONTIG_145_NC14_v4_62925_230 Length = 62925 Score = 46.2 bits (108), Expect = 6e-05 Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 11/110 (10%) Frame = +2 Query: 15 NLGILGHVDSGKTTLTRRIAELGSTSAFDAHATSTTTDGI--RRNTLDL---------GF 63 N+GI H+DSGKTTLT RI L T ++ DG+ + ++++L Sbjct: 19202 NIGISAHIDSGKTTLTERI--LYYTGKINSIHDVRGKDGVGAKMDSMELEREKGITIQSA 19375 Query: 64 STMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQT 113 +T + +ID PGH V A V D I+++ V+G+Q Q+ Sbjct: 19376 ATFCQWKENHINIIDTPGHVDFTIEVERALRVLDGGILVLCGVSGVQSQS 19525 >gi|325184719|emb|FR824111.1| Albugo laibachii Nc14, genomic contig CONTIG_66_NC14_v4_99192_244 Length = 99192 Score = 45.8 bits (107), Expect = 7e-05 Identities = 38/169 (22%), Positives = 69/169 (40%), Gaps = 46/169 (27%) Frame = +3 Query: 14 LNLGILGHVDSGKTTLTRRI------------------AELGSTSAFD-AHATSTTTDGI 54 +NL ++GHVD+GK+T+ + +++ S+F A T + + Sbjct: 31398 INLIVIGHVDAGKSTIMGHLLFQLGYVSPKLMHKYEKESKIAGKSSFKYAWVTDADQEEV 31577 Query: 55 --------------------RRNTLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAAST 94 R T+D+G + S + + L+D PGH I ++ +T Sbjct: 31578 SLPHHLMPSFPHSNRT**RARGVTMDIGLKFFETAS-KCVTLLDAPGHKDFIPKMITGAT 31754 Query: 95 VFDMAIVIIDVVAGI-------QPQTAEHLLLASKFCPNRVIIVLNKCD 136 D+A++++ G QT EH LL ++I+ +NK D Sbjct: 31755 QADVALLVVPASTGAFEGAFENSGQTKEHTLLIKSLGVTQIIVAINKMD 31901 >gi|325190899|emb|FR824340.1| Albugo laibachii Nc14, genomic contig CONTIG_295_NC14_v4_31828_130 Length = 31828 Score = 39.7 bits (91), Expect = 0.005 Identities = 39/162 (24%), Positives = 64/162 (39%), Gaps = 40/162 (24%) Frame = +3 Query: 15 NLGILGHVDSGKTTLTRRIAE----LGSTSAFDAHATSTTTDGIRR-------------- 56 N+ ++ HVD GK+TLT + + + A +A T T D R Sbjct: 4218 NMSVIAHVDHGKSTLTDSLVSKAGIISAKHAGEARFTDTRQDEQDRCITIKSTGISMFFE 4397 Query: 57 NTLDLGFSTMT--------------------SLSGRRLALIDCPGHSGLIRAVLAASTVF 96 +D+G S + + LID PGH V AA V Sbjct: 4398 YNMDVGEKATAAKVANESVVAAKTDSETVEISQNSYLINLIDSPGHVDFSSEVTAALRVT 4577 Query: 97 DMAIVIIDVVAG--IQPQTAEHLLLASKFCPNRVIIVLNKCD 136 D A+V++D + G +Q +T ++ + P ++++NK D Sbjct: 4578 DGALVVVDCIEGVCVQTETVLRQAISERVKP---VLMVNKVD 4694 >gi|325190975|emb|FR824344.1| Albugo laibachii Nc14, genomic contig CONTIG_299_NC14_v4_31534_143 Length = 31534 Score = 39.7 bits (91), Expect = 0.005 Identities = 39/162 (24%), Positives = 64/162 (39%), Gaps = 40/162 (24%) Frame = +1 Query: 15 NLGILGHVDSGKTTLTRRIAE----LGSTSAFDAHATSTTTDGIRR-------------- 56 N+ ++ HVD GK+TLT + + + A +A T T D R Sbjct: 2113 NMSVIAHVDHGKSTLTDSLVSKAGIISAKHAGEARFTDTRQDEQDRCITIKSTGISMFFE 2292 Query: 57 NTLDLGFSTMT--------------------SLSGRRLALIDCPGHSGLIRAVLAASTVF 96 +D+G S + + LID PGH V AA V Sbjct: 2293 YNMDVGEKATAAKVANESVVAAKTDSETVEISQNSYLINLIDSPGHVDFSSEVTAALRVT 2472 Query: 97 DMAIVIIDVVAG--IQPQTAEHLLLASKFCPNRVIIVLNKCD 136 D A+V++D + G +Q +T ++ + P ++++NK D Sbjct: 2473 DGALVVVDCIEGVCVQTETVLRQAISERVKP---VLMVNKVD 2589 >gi|325191704|emb|FR824361.1| Albugo laibachii Nc14, genomic contig CONTIG_316_NC14_v4_29481_226 Length = 29481 Score = 39.7 bits (91), Expect = 0.005 Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Frame = +2 Query: 422 SAICTGMFKAETNFDVFRGFQICTSSGPRGKIEGAF-GKSGKFRVTFAEKI 471 +A GMF +E F G I T SG RG+++ A G G FR TF +KI Sbjct: 13823 TAFIKGMFNSELEVAKFEGASIRTVSGIRGRVKKAIHGSKGDFRATFEDKI 13975 >gi|325188022|emb|FR824204.1| Albugo laibachii Nc14, genomic contig CONTIG_159_NC14_v4_58101_232 Length = 58101 Score = 39.3 bits (90), Expect = 0.007 Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 31/138 (22%) Frame = -1 Query: 14 LNLGILGHVDSGKTTLTRRIA----------------------ELGSTSA-------FDA 44 L + +G+VDSGK++L + E G TS+ FDA Sbjct: 39876 LRVAFVGNVDSGKSSLIGTLIKGELDDGRGSSRKAIFRHKHEIETGRTSSVATAYIGFDA 39697 Query: 45 HATSTTTDGIRRNTLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVF--DMAIVI 102 + + +R + + + S++ +R+ LID GH ++ + T D+ IV+ Sbjct: 39696 NGNQIVS---KRAGKSIPSAELASIAEKRIQLIDLAGHEKYLKTTVYGLTGMQPDIVIVV 39526 Query: 103 IDVVAGIQPQTAEHLLLA 120 I G++ T EHL +A Sbjct: 39525 IGTNMGVKRMTKEHLAIA 39472 >gi|325191291|emb|FR824390.1| Albugo laibachii Nc14, genomic contig CONTIG_345_NC14_v4_25966_356 Length = 25966 Score = 37.4 bits (85), Expect = 0.026 Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 1/62 (1%) Frame = +3 Query: 76 LIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEHLLLASKFCP-NRVIIVLNK 134 L+D PGH V A + D A+V+ID V G PQT H +L + R +V+NK Sbjct: 20826 LVDSPGHVDFSFDVSTAVRICDGALVLIDAVEGFCPQT--HAVLRQAWIEGTRPCLVINK 20999 Query: 135 CD 136 D Sbjct: 21000 ID 21005 >gi|325186899|emb|FR824168.1| Albugo laibachii Nc14, genomic contig CONTIG_123_NC14_v4_71167_256 Length = 71167 Score = 35.4 bits (80), Expect = 0.10 Identities = 25/105 (23%), Positives = 46/105 (43%), Gaps = 10/105 (9%) Frame = +3 Query: 15 NLGILGHVDSGKTTLTRRIAELGSTSAFDAHATSTTTDGIRRNTLDLGFS--------TM 66 N+ I+G + GKT + + +D TD IR++ + S + Sbjct: 44496 NIAIVGDLHHGKTLFMDLLIQQTHLKKWDPEKEKRYTD-IRKDEQERKISIKSTPVSLVL 44672 Query: 67 TSLSGRRLAL--IDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGI 109 + G+ + +DCPGH +AA + D AI+++D + G+ Sbjct: 44673 PTSKGKHYLINAMDCPGHVNFKDESIAALQIADGAILVVDAIEGV 44807 >gi|325181994|emb|FR824067.1| Albugo laibachii Nc14, genomic contig CONTIG_22_NC14_v4_183579_236 Length = 183579 Score = 32.7 bits (73), Expect = 0.65 Identities = 16/44 (36%), Positives = 25/44 (56%) Frame = +1 Query: 11 VGPLNLGILGHVDSGKTTLTRRIAELGSTSAFDAHATSTTTDGI 54 V P+N+ + G SGKT + RR+A++ ++ AT T GI Sbjct: 112660 VSPMNILMSGPTGSGKTEIARRLAKMTNSPFLKVEATKYTEVGI 112791 >gi|325192485|emb|FR824474.1| Albugo laibachii Nc14, genomic contig CONTIG_431_NC14_v4_18283_238 Length = 18283 Score = 32.3 bits (72), Expect = 0.85 Identities = 14/29 (48%), Positives = 19/29 (65%) Frame = +1 Query: 400 LPPRFTRKCRKGHVERVEKDGFSAICTGM 428 LPPR R GHV+++ K G +A+C GM Sbjct: 5680 LPPRIIR----GHVDKIAKRGITAVCIGM 5754 >gi|325182478|emb|FR824073.1| Albugo laibachii Nc14, genomic contig CONTIG_28_NC14_v4_152595_242 Length = 152595 Score = 31.6 bits (70), Expect = 1.4 Identities = 21/64 (32%), Positives = 30/64 (46%) Frame = +2 Query: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQPQTAEHLLLASKFCPNRVIIVLN 133 L LID PGH V + + ++++D GIQ QT A K RV+ +L Sbjct: 124025 LNLIDTPGHVDFSYEVHRSLAACEGVLLLVDCSQGIQAQTLATFYAAKKL-NMRVLPLLT 124201 Query: 134 KCDL 137 K D+ Sbjct: 124202 KIDM 124213 >gi|325181896|emb|FR824066.1| Albugo laibachii Nc14, genomic contig CONTIG_21_NC14_v4_184092_240 Length = 184092 Score = 28.9 bits (63), Expect = 9.4 Identities = 14/54 (25%), Positives = 24/54 (44%) Frame = -2 Query: 291 TKFVLATVEPIQFFRKSINSKSKIHVAVAFETVMAECQFLKEKENGEFEMLPSL 344 ++F+LA P+Q R ++ + +H EC FL ++ E P L Sbjct: 11120 SRFLLAVFWPVQLCRSLLHQSNGMHTQSPIHIRSIECHFLAAPKSSELFQWPFL 10959 Database: A.laibachii_Nc14/genome.fa Posted date: Nov 21, 2011 7:46 PM Number of letters in database: 32,740,139 Number of sequences in database: 3816 Lambda K H 0.322 0.138 0.404 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 16,096,947 Number of Sequences: 3816 Number of extensions: 213832 Number of successful extensions: 1015 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 221 Number of HSP's successfully gapped in prelim test: 43 Number of HSP's that attempted gapping in prelim test: 682 Number of HSP's gapped (non-prelim): 470 length of query: 500 length of database: 10,913,379 effective HSP length: 104 effective length of query: 396 effective length of database: 10,516,515 effective search space: 4164539940 effective search space used: 4164539940 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 63 (28.9 bits)