TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000108_1.0 # Protein # Selenophosphate synthetase 2 (SPS2)
# Mus musculus # Complete
         (452 letters)

Database: L.donovani_BPK282A1/genome.fa 
           36 sequences; 32,444,998 total letters

Searching....................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

contig_36                                                             226   3e-59
contig_26                                                              30   3.8  
contig_15                                                              30   5.0  
contig_33                                                              29   8.5  
contig_12                                                              29   8.5  

>contig_36
          Length = 2713248

 Score =  226 bits (576), Expect = 3e-59
 Identities = 154/410 (37%), Positives = 198/410 (48%), Gaps = 15/410 (3%)
 Frame = -1

Query: 27      AGWSAGRSFSNYRPFEPQTLGFSPSWRLTSFSGMKGUGCKVPQETLLKLLEGLTRPALQP 86
               AG S G +      F+P +LG    ++LT ++ +KG  CK+PQ  LL LL+ L       
Sbjct: 2120655 AGESNGTADLKKPRFDPVSLGLPAEFQLTDYTRLKGCSCKLPQPKLLALLQEL------- 2120497

Query: 87      PLTSXXXXXXXXXXXXXXXSTRPGPGSAFPSLSIGMDSCVIPLRHGG-----LSLVQTTD 141
                                  ST PG         +GMD  ++PL H       L LV TTD
Sbjct: 2120496 -------------------STTPG------QKDVGMDCSIVPLHHTNSKGEALFLVSTTD 2120392

Query: 142     FFYPLVEDPYMMGRIACANVLSDLYAMGITECDNXXXXXXXXXXXXEKEREKVTPLMIKG 201
               FF+P V DP++ G+I  ANVLSDLY+MGI +CD             E ER   T  ++KG
Sbjct: 2120391 FFFPSVSDPFLQGQIGAANVLSDLYSMGIPDCDTMLMLLAASTEMDEHERLITTREIMKG 2120212

Query: 202     FRDXXXXXXXXXXXXXXXXNPWIIIGGVATVVCQQNEFIMPDSAV-VGDVLVLTKPLGTQ 260
               F +                NPW +IGGVA  V  + E + P   +  GD+LVLTKPLG Q
Sbjct: 2120211 FAERARLATTTVTGGQTVMNPWPLIGGVAMAVVSEAEMVRPAGLLCAGDILVLTKPLGCQ 2120032

Query: 261     VAANAHQWLDNPEKW--NKIKMVVSREEVELAYQEAMFNMATLNRTAAGLMHTFNAHAAT 318
               VA N  QWL  P       I   +S EE+E  Y  A  +M  LNR  A LM    AH AT
Sbjct: 2120031 VAVNLKQWLLRPSPLYEEAIAGHISPEEIEELYNMATDSMRRLNREGARLMRKHGAHGAT 2119852

Query: 319     DITGFGILGHSQNLAKQQ-----KNEVSFVIHNLPXXXXXXXXXXXXG-RFGLLQGTSAE 372
               D+TGFGILGH+ N    Q        +  V+  LP              ++ LL+G SAE
Sbjct: 2119851 DVTGFGILGHANNFGAAQTVGDAPRSLCLVLERLPMFKTAVAASKRMNDKYRLLEGYSAE 2119672

Query: 373     TSGGLLICLPREQAAR-FCSEIKSSKYGEGHQAWIVGIVEKGNRTARIID 421
               TSGGLL+  P   AA  FC+E+  +    G  +WIVG VE  +R A + D
Sbjct: 2119671 TSGGLLVAFPSTTAAEAFCAEL--TAIDGGCPSWIVGHVE--DRAANVAD 2119534


>contig_26
          Length = 1058259

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = +1

Query: 341    SFVIHNLPXXXXXXXXXXXXGRFGLLQGTSAETSGGLLICLPREQAARFCSEIK-SSKYG 399
              SF++H+LP            G  GL Q  +   S GLL CL   + + +C+ +   S  G
Sbjct: 841594 SFLLHSLPFSLFVVSRLLPRGGRGLFQKETVFFSLGLLHCLLASRVSGWCASLSLISSLG 841773

Query: 400    EGH 402
              + H
Sbjct: 841774 DEH 841782


>contig_15
          Length = 618357

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +1

Query: 247    VGDVLVLTKPLGTQVAANAHQWLDNPEKWNKIK 279
              VGD  VLT P    V A  HQ +D P + + ++
Sbjct: 287668 VGDTCVLTSPAALPVGATVHQMVDWPRRMDHMQ 287766


>contig_33
          Length = 1453978

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 29/114 (25%), Positives = 42/114 (36%), Gaps = 3/114 (2%)
 Frame = +2

Query: 25    GPAGWSAGRSFSNYRPFEPQTLGFSPSWRLTSFSGMKGUGCKVPQE--TLLKLLEGLTRP 82
             GP  W A  S S Y       L FSP       SG +   C  P +  T  +      R 
Sbjct: 77504 GPVVWFAASSPSTYAALSSMALRFSP------LSGSRSSPCAAPMKSPTCARKNSIWCRC 77665

Query: 83    ALQPPLTSXXXXXXXXXXXXXXXSTRPGPGSAFPSLSIG-MDSCVIPLRHGGLS 135
             A + P+++                +     SA P+ S+G +   +I L H G+S
Sbjct: 77666 AAEEPISAPAGAPLLSRYCAISIDSNINRLSALPTSSVGTVSRGLICLYHCGIS 77827


>contig_12
          Length = 569561

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
 Frame = +2

Query: 381    LPREQAARFCSEIKSSKYGEGHQAWI--VGIVEKGNRTARIIDKPRV 425
              LPR   A F        Y   + +W+  VGI E+G RT   + +P +
Sbjct: 105989 LPRVSPAPFLLSCTLLTYRAAYSSWLLSVGISERGRRTRAYVGEPEI 106129


  Database: L.donovani_BPK282A1/genome.fa
    Posted date:  Nov 21, 2011  7:46 PM
  Number of letters in database: 32,444,998
  Number of sequences in database:  36
  
Lambda     K      H
   0.319    0.136    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,422,953
Number of Sequences: 36
Number of extensions: 228352
Number of successful extensions: 1045
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1008
Number of HSP's gapped (non-prelim): 100
length of query: 452
length of database: 10,814,999
effective HSP length: 104
effective length of query: 348
effective length of database: 10,811,255
effective search space: 3762316740
effective search space used: 3762316740
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)