TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000033_1.0 # Protein # Selenophosphate synthetase 2 (SPS2)
# Homo sapiens # Complete
         (448 letters)

Database: G.niphandrodes/genome.fa 
           3680 sequences; 15,362,869 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|338239606|gb|AFNH01003363.1| Gregarina niphandrodes asmbl.710...    32   0.44 
gi|338241177|gb|AFNH01002578.1| Gregarina niphandrodes asmbl.330...    32   0.44 
gi|338241486|gb|AFNH01002422.1| Gregarina niphandrodes asmbl.316...    31   0.99 
gi|338241151|gb|AFNH01002591.1| Gregarina niphandrodes asmbl.331...    30   1.3  
gi|338240893|gb|AFNH01002720.1| Gregarina niphandrodes asmbl.344...    30   2.2  
gi|338242391|gb|AFNH01001969.1| Gregarina niphandrodes asmbl.274...    30   2.2  
gi|338240452|gb|AFNH01002940.1| Gregarina niphandrodes asmbl.364...    29   2.9  
gi|338241574|gb|AFNH01002378.1| Gregarina niphandrodes asmbl.312...    29   2.9  
gi|338242676|gb|AFNH01001827.1| Gregarina niphandrodes asmbl.261...    29   3.8  
gi|338241247|gb|AFNH01002543.1| Gregarina niphandrodes asmbl.327...    28   4.9  
gi|338241772|gb|AFNH01002279.1| Gregarina niphandrodes asmbl.302...    28   4.9  
gi|338239379|gb|AFNH01003476.1| Gregarina niphandrodes asmbl.812...    28   6.4  
gi|338240899|gb|AFNH01002717.1| Gregarina niphandrodes asmbl.343...    28   6.4  
gi|338241955|gb|AFNH01002187.1| Gregarina niphandrodes asmbl.294...    28   6.4  
gi|338242301|gb|AFNH01002014.1| Gregarina niphandrodes asmbl.278...    28   8.4  

>gi|338239606|gb|AFNH01003363.1| Gregarina niphandrodes asmbl.710,
           whole genome shotgun sequence
          Length = 1200

 Score = 32.0 bits (71), Expect = 0.44
 Identities = 18/45 (40%), Positives = 25/45 (55%)
 Frame = +3

Query: 56  GMKGUGCKVPQEALLKLLAGLTRPDVRPPLGRGLVGGQEEASQEA 100
           G +G  C  PQ+ALLK++  L R      +GR L+  Q   SQE+
Sbjct: 288 GKRGLLCYQPQDALLKIVNALARVSTTNHVGRRLI-SQSTGSQES 419


>gi|338241177|gb|AFNH01002578.1| Gregarina niphandrodes asmbl.3306,
            whole genome shotgun sequence
          Length = 11881

 Score = 32.0 bits (71), Expect = 0.44
 Identities = 18/45 (40%), Positives = 25/45 (55%)
 Frame = -2

Query: 56   GMKGUGCKVPQEALLKLLAGLTRPDVRPPLGRGLVGGQEEASQEA 100
            G +G  C  PQ+ALLK++  L R      +GR L+  Q   SQE+
Sbjct: 8331 GKRGLLCYQPQDALLKIVNALARVSTANHVGRRLI-SQSTGSQES 8200


>gi|338241486|gb|AFNH01002422.1| Gregarina niphandrodes asmbl.3164,
             whole genome shotgun sequence
          Length = 28666

 Score = 30.8 bits (68), Expect = 0.99
 Identities = 29/92 (31%), Positives = 36/92 (39%), Gaps = 3/92 (3%)
 Frame = -1

Query: 29    GRSFSNYRPFEPQALG--LSPSWRLTGFSGMKGUGCKVPQ-EALLKLLAGLTRPDVRPPL 85
             G  FS   P  P A    L+P+  L     +   G  V   +AL      L  P   PPL
Sbjct: 21904 GSRFSPLAPTRPLAPTGPLAPTGPLAPTGPLAPTGPTVAAGDALTGGFETLLAPAAGPPL 21725

Query: 86    GRGLVGGQEEASQEAGLPAGAGPSPTFPALGI 117
               GL  G   A   A    GA  +P  PA+G+
Sbjct: 21724 AGGLTAGGFAALDSAAGAGGAFLAPALPAIGL 21629


>gi|338241151|gb|AFNH01002591.1| Gregarina niphandrodes asmbl.3318,
             whole genome shotgun sequence
          Length = 27172

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +1

Query: 76    LTRPDVRPPLGRGLVGGQEEASQEAGLPAGAGPSPT 111
             L++ + RPP GRG  G ++  S++AG   G G   T
Sbjct: 26263 LSKKEERPPTGRGGFGSRDTYSRDAGTGGGFGSRGT 26370


>gi|338240893|gb|AFNH01002720.1| Gregarina niphandrodes asmbl.3440,
            whole genome shotgun sequence
          Length = 10094

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 19/52 (36%), Positives = 27/52 (51%)
 Frame = -2

Query: 43   LGLSPSWRLTGFSGMKGUGCKVPQEALLKLLAGLTRPDVRPPLGRGLVGGQE 94
            +G  P+WR T +SG +   C  P        +G+  PD+R   G+GLV G E
Sbjct: 4549 IGRRPTWRQTHYSGWE---CNSPG*G-----SGIHHPDIR--CGKGLVQGPE 4424


>gi|338242391|gb|AFNH01001969.1| Gregarina niphandrodes asmbl.2747,
           whole genome shotgun sequence
          Length = 10442

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
 Frame = +3

Query: 73  LAGLTRPDVRPPLGRGLVGGQEEASQEAGLPAGAGPS---PTFPALGIG 118
           LA  T P + P +GRG+  G  E    AG P+  GP+   P  P L +G
Sbjct: 93  LASYTAP-IGPDIGRGIGPGIREPVAGAGGPSIPGPAMGGPAIPVLAMG 236


>gi|338240452|gb|AFNH01002940.1| Gregarina niphandrodes asmbl.3644,
             whole genome shotgun sequence
          Length = 23181

 Score = 29.3 bits (64), Expect = 2.9
 Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
 Frame = +1

Query: 49    WRLTGFSGMKGUGCKVPQEALL---KLLAGLTRPDVR-PPLGRGLVGGQEEASQEAGLPA 104
             W L G  G++  GCK+  ++++    LL GL +  +    LG    G  ++ +    L A
Sbjct: 21382 WGLVGLGGVQSRGCKIRVQSMIMRRALLLGLAQAQLHFASLGNWGAGNAQQHAVARSLKA 21561

Query: 105   GAGPSP 110
              A   P
Sbjct: 21562 AAANPP 21579


>gi|338241574|gb|AFNH01002378.1| Gregarina niphandrodes asmbl.3121,
            whole genome shotgun sequence
          Length = 10671

 Score = 29.3 bits (64), Expect = 2.9
 Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = -2

Query: 104  AGAGPSPTFPALGI-GMDSCVIPLRH 128
            AG  P PT P  G  G  +CV+PLRH
Sbjct: 5123 AGLSP*PTAPISGTRGSHTCVVPLRH 5046


>gi|338242676|gb|AFNH01001827.1| Gregarina niphandrodes asmbl.2617,
            whole genome shotgun sequence
          Length = 7215

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 7/44 (15%)
 Frame = +3

Query: 75   GLTRPDVRPPLGRGLVGGQ-------EEASQEAGLPAGAGPSPT 111
            G  RPD+RP + +GL  GQ       E   Q  GL A  G S T
Sbjct: 6546 GYERPDLRPQIRKGLSEGQAAAWIGDEVRRQRRGLEAALGGSGT 6677


>gi|338241247|gb|AFNH01002543.1| Gregarina niphandrodes asmbl.3274,
             whole genome shotgun sequence
          Length = 11142

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
 Frame = +1

Query: 75    GLTRPDVRPPLGRGLVGGQ---EEASQEAGLPAGAGPSPTFPA 114
             G   P V P   R   G Q   +E  Q++G P G G  PT+PA
Sbjct: 10741 GCCHPQVAPTTPRRRAGAQGPAQERGQKSGGPVGTG--PTYPA 10863


>gi|338241772|gb|AFNH01002279.1| Gregarina niphandrodes asmbl.3028,
            whole genome shotgun sequence
          Length = 14770

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 28/96 (29%), Positives = 38/96 (39%), Gaps = 4/96 (4%)
 Frame = -1

Query: 26   LTLGRSFSNYRPFEPQALGLSPSWRLTGFSGMKGUGCKVPQEALLKLLAGLTRPDVRPPL 85
            L LG  F   R +  + +G +  W LTG S      C      L KLL+   R  VRPP+
Sbjct: 3406 LQLGVEFQ-MREYSWRGMGFATIW-LTGLS--TSA*CMPMLSLLTKLLSWAVRATVRPPV 3239

Query: 86   ----GRGLVGGQEEASQEAGLPAGAGPSPTFPALGI 117
                 R   G    +  +  LP    P    P +G+
Sbjct: 3238 A*ERNRVATGRMGRSFSQIALPLMGLPLMGLPLMGL 3131


>gi|338239379|gb|AFNH01003476.1| Gregarina niphandrodes asmbl.812,
            whole genome shotgun sequence
          Length = 2360

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = +3

Query: 77   TRPDVRPPLGRGLVGGQEEASQEAGLPAGAGP-SPTFPALGIG 118
            T P +RP   R   GG   AS      + AGP SPT P L  G
Sbjct: 1776 TPPHLRPAAARSARGGSCSASACPDAASTAGPDSPTAPRLAAG 1904


>gi|338240899|gb|AFNH01002717.1| Gregarina niphandrodes asmbl.3436,
            whole genome shotgun sequence
          Length = 13555

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 19/37 (51%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +3

Query: 83   PPLGRGLVGGQEEASQEAGLPAGAGP-SPTFPALGIG 118
            P  G+G   GQ  AS  AG  +GAGP S   PALG G
Sbjct: 3000 PASGQGPASGQGPAS-TAGPASGAGPASSAGPALGAG 3107


>gi|338241955|gb|AFNH01002187.1| Gregarina niphandrodes asmbl.2946,
            whole genome shotgun sequence
          Length = 8311

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = +3

Query: 347  IAKMAAVSKASGRFGLLQGTSAETSGGLLICLP 379
            I + ++V   S  F LL G+   TSGG L+CLP
Sbjct: 3645 ITRTSSVRLGSSLFPLLTGSDL-TSGGSLVCLP 3740


>gi|338242301|gb|AFNH01002014.1| Gregarina niphandrodes asmbl.2788,
            whole genome shotgun sequence
          Length = 10447

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 34/116 (29%), Positives = 45/116 (38%), Gaps = 6/116 (5%)
 Frame = -1

Query: 36   RPFEPQALGLSPSWRLT-GFSGMKGUGCKVPQEALLKLLAGLTRPDVRPPLGRGLVGGQE 94
            RP +   LG  PS RLT G S  +G                     VR   GR +V  +E
Sbjct: 7864 RPSKQLVLGRRPSTRLTHGISPRRGIS------------------PVRISRGREVVPDRE 7739

Query: 95   -----EASQEAGLPAGAGPSPTFPALGIGMDSCVIPLRHGGLSLVQTTDFFYPLVE 145
                 E S    +P G  PS   P+  I + S  I L H G+ L  ++    P +E
Sbjct: 7738 VASGREISSAREVPTGVEPSGIVPSDTICLFSGSICLPHDGICLPPSSFSPTPFLE 7571


  Database: G.niphandrodes/genome.fa
    Posted date:  Nov 21, 2011  7:46 PM
  Number of letters in database: 15,362,869
  Number of sequences in database:  3680
  
Lambda     K      H
   0.320    0.136    0.412 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,788,661
Number of Sequences: 3680
Number of extensions: 129874
Number of successful extensions: 771
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 411
Number of HSP's successfully gapped in prelim test: 58
Number of HSP's that attempted gapping in prelim test: 313
Number of HSP's gapped (non-prelim): 555
length of query: 448
length of database: 5,120,956
effective HSP length: 98
effective length of query: 350
effective length of database: 4,760,316
effective search space: 1666110600
effective search space used: 1666110600
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)