TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000048_1.0 # Protein # Selenophosphate synthetase 2 (SPS2)
# Drosophila melanogaster # Complete
         (370 letters)

Database: S.arctica/genome.fa 
           15,618 sequences; 121,588,341 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

supercont1.927 of Sphaeroforma arctica JP610                           67   1e-10

>supercont1.927 of Sphaeroforma arctica JP610
          Length = 30644

 Score = 66.6 bits (161), Expect = 1e-10
 Identities = 33/83 (39%), Positives = 52/83 (62%)
 Frame = +2

Query: 155  QLKINPWCIIGGIATSVCRSEEIILPSNAQPGDVLVLTKPLGGQMAMDAHLWQLNQTEKY 214
            Q  +NPW I+GG+A SV  + ++I P NA+ GDV+VLTKPLG Q+A++ H W L+Q + +
Sbjct: 3896 QSVMNPWPILGGVAQSVMLATDVITPENARAGDVMVLTKPLGTQLAVNLHQW-LDQPKWW 4072

Query: 215  KKLLSECSDADIKETFEIAVKSM 237
             ++        +   + +A  SM
Sbjct: 4073 DQVKHVIDAETVIRAYNVASASM 4141



 Score = 64.7 bits (156), Expect = 4e-10
 Identities = 32/58 (55%), Positives = 40/58 (68%)
 Frame = +1

Query: 230  FEIAVKSMTYLNKNAALLMHKYQAHCATDITGFGLLGHANNLAQFQKEKVLFQINKLP 287
            F I  + +  LN   A LMHK+ A  ATD+TGFG+LGHANNLAQ QK K+  +I+ LP
Sbjct: 4564 F*IYCQYLLRLNMVGAQLMHKHNARAATDVTGFGILGHANNLAQAQKAKLTLRIDSLP 4737



 Score = 57.4 bits (137), Expect = 6e-08
 Identities = 25/48 (52%), Positives = 37/48 (77%)
 Frame = +3

Query: 70   LLIQTVDFFYPMVNDPELLGRIALANVLSDVYAVGVTQFDTVEMIVST 117
            +++ T DFFYP+V+DP   G+IA ANVLSD+YAVG  + D + MI+++
Sbjct: 2592 VMVSTTDFFYPLVDDPYTQGQIACANVLSDMYAVGARKVDNMLMILAS 2735



 Score = 36.6 bits (83), Expect = 0.11
 Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
 Frame = +3

Query: 289  IKNVLKFSTLVGQSTKFRSGRSVETSGGLLICLPADAADKFCRDFEEATNGEQ--KSFQI 346
            +  VLK   L   +T    G S ETSGGLL+C+    AD FCR    A + E+  K+F +
Sbjct: 6096 VDRVLKGGALFNLAT----GYSAETSGGLLMCMAPADADAFCR----AIHAEEGWKAFVV 6251

Query: 347  G 347
            G
Sbjct: 6252 G 6254


  Database: S.arctica/genome.fa
    Posted date:  Nov 21, 2011  7:47 PM
  Number of letters in database: 121,588,341
  Number of sequences in database:  15,618
  
Lambda     K      H
   0.319    0.135    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,922,299
Number of Sequences: 15618
Number of extensions: 663632
Number of successful extensions: 2201
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 579
Number of HSP's successfully gapped in prelim test: 100
Number of HSP's that attempted gapping in prelim test: 1481
Number of HSP's gapped (non-prelim): 1013
length of query: 370
length of database: 40,529,447
effective HSP length: 111
effective length of query: 259
effective length of database: 38,795,849
effective search space: 10048124891
effective search space used: 10048124891
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)