TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000048_1.0 # Protein # Selenophosphate synthetase 2 (SPS2)
# Drosophila melanogaster # Complete
         (370 letters)

Database: P.capsici/genome.fa 
           917 sequences; 64,023,748 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PHYCAscaffold_49                                                      254   1e-67
PHYCAscaffold_3                                                        30   4.3  
PHYCAscaffold_80                                                       29   9.7  
PHYCAscaffold_67                                                       29   9.7  

>PHYCAscaffold_49
          Length = 508508

 Score =  254 bits (649), Expect = 1e-67
 Identities = 158/410 (38%), Positives = 225/410 (54%), Gaps = 42/410 (10%)
 Frame = -3

Query: 2     FQPEKHGLEPDFQLTKFTTHTGUSCKIPQKVLEKYLRGTEIENKNNDGYLIGSGMDCAVI 61
             F P   GLE DF LT F+   G  CK+PQ  L  YL     + K N+      GMD +V+
Sbjct: 85458 FDPTSLGLEADFVLTNFSALKGCGCKLPQAKLLGYLDDLANDLKPNET----PGMDSSVV 85291

Query: 62    PLKRHKDYLLIQTVDFFYPMVNDPELLGRIALANVLSDVYAVGVTQFDTVEMIVSTSTSF 121
              +    D  L+ T DFF+P V DP + G+IA ANVLSD YA+GVT+ DT+ MI+      
Sbjct: 85290 KISHGTDLYLVSTTDFFFPSVEDPYVQGKIACANVLSDAYAMGVTEVDTMLMILGVCRDM 85111

Query: 122   SEKERDVVIGLVMKGFQNSLKANGYRNTPLIIRQLKINPWCIIGGIATSVCRS------- 174
             SEK+RDVV   +++GF N L    + N  +   Q  +NPW I+GG+A SV          
Sbjct: 85110 SEKQRDVVTTQMIRGF-NDLARQAHTN--VTGGQTVMNPWPIVGGVAMSVRSG**KLSIQ 84940

Query: 175   --------------EEIILPSNAQPGDVLVLTKPLGGQMAMDAHLWQLNQTEKYKKLLSE 220
                            +II P NA  GDV++LTKPLG Q+A++   W+  + E+++++ S 
Sbjct: 84939 HL*LI*D*RVFPAESQIIRPENAVVGDVIILTKPLGTQVAVNLFQWK-KKPERWQRVESI 84763

Query: 221   CSDADIKETFEIAVKSMTYLNKNAALLMHK---------------------YQAHCATDI 259
              +  D    F++A +SM+ LN NAA +MHK                     Y AH ATD+
Sbjct: 84762 VTPEDADVAFQMASESMSRLNLNAAKMMHKVR*VFCLLPFITY*LSLSLC*YGAHSATDV 84583

Query: 260   TGFGLLGHANNLAQFQKEKVLFQINKLPIIKNVLKFSTLVGQSTKFRSGRSVETSGGLLI 319
             TGFG++ HA N A+ Q   V F+I+ LPIIKN+ K +  +G S K   G + ETSGGLL+
Sbjct: 84582 TGFGIVAHARNQAKSQLGDVSFEIHTLPIIKNMAKVNEAIGNSFKLLDGFAAETSGGLLL 84403

Query: 320   CLPADAADKFCRDFEEATNGEQKSFQIGHVTAANESDAVLCEDVEFIEVS 369
             CLPA+ AD + ++  E     + ++ +G V A ++ DA +  D + IEV+
Sbjct: 84402 CLPAENADAYIKELRELDG--KPAWVVGRVVAGSK-DAYIAPDSKVIEVT 84262


>PHYCAscaffold_3
          Length = 1611504

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
 Frame = +3

Query: 85      PELLGRIALANVLSDVYAVGV--TQFDTVEMIVSTSTSFSEKERDVVIGLVMKGFQNSLK 142
               PELL   A +++ SDVYA G+  ++ DT E+       F+E+E+     L+    ++S +
Sbjct: 1103556 PELLANGAQSSMASDVYAFGIVLSEIDTCEL------PFAEREKLAARSLLATAGEDSSE 1103717

Query: 143     ANGYR--NTPLIIRQLKINPW 161
                   R  N   I+ ++    W
Sbjct: 1103718 DGDSRAMNESTIVHRIVSEGW 1103780


>PHYCAscaffold_80
          Length = 185445

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = +1

Query: 87    LLGRIALANVLSDVYAVGVTQFDTVEMIVSTSTSFSEKE--RDVVIGLVMKGFQN 139
             LLG +   N+ S   A  ++   T   I  TST+F +KE    V   +VM+G +N
Sbjct: 19192 LLGHVTRYNIESKTNADNISVPSTAFQICWTSTAFQKKEHVHQVSESVVMRGIRN 19356


>PHYCAscaffold_67
          Length = 292061

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 36/164 (21%), Positives = 70/164 (42%), Gaps = 18/164 (10%)
 Frame = +1

Query: 150    PLIIRQLKINPWCIIGGIATSV-CRSEEIILPSNAQPGDVLVLTKPLGGQMAM-DAHLWQ 207
              P+ +R L+I  W        S  CR E++I        D   +T+   G+    D H  +
Sbjct: 157165 PMSMRPLEIESWAENAREHCSPRCRVEQVI-------HDRCEITQQSPGEQRW*DRHTRR 157323

Query: 208    LNQTEK-----------YKKLLSECSDADIKETFEIAVKSMTYLNKNAALLM----HKYQ 252
              + QT             ++++ S C DA +  T     +    + K  + ++    HKY+
Sbjct: 157324 VLQTAYRFLSPAGWRF*FQRMQSHCLDA-LGWTLRFRKRLPRRI*KIVSYILIQDHHKYR 157500

Query: 253    AHCATDITGFGLLGHANNLAQFQKEKVLFQI-NKLPIIKNVLKF 295
               +  T+ + +  +   NN  Q+Q  K++ Q+   L + ++ L+F
Sbjct: 157501 GYTRTEASSYTNVSITNNYIQYQLLKIMLQLWAALKLFRSCLRF 157632


  Database: P.capsici/genome.fa
    Posted date:  Nov 21, 2011  7:46 PM
  Number of letters in database: 64,023,748
  Number of sequences in database:  917
  
Lambda     K      H
   0.319    0.135    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,047,117
Number of Sequences: 917
Number of extensions: 324597
Number of successful extensions: 1337
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 1168
Number of HSP's gapped (non-prelim): 467
length of query: 370
length of database: 21,341,249
effective HSP length: 106
effective length of query: 264
effective length of database: 21,244,047
effective search space: 5608428408
effective search space used: 5608428408
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)