TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000048_1.0 # Protein # Selenophosphate synthetase 2 (SPS2)
# Drosophila melanogaster # Complete
         (370 letters)

Database: L.tarentolae/genome.fa 
           7267 sequences; 31,598,840 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Lt_contig6185  |  | 1 to 5850                                         226   2e-59
Lt_contig5903  |  | 1 to 13814                                         32   0.70 
Lt_contig5117  |  | 1 to 5653                                          30   2.7  
Lt_contig5269  |  | 1 to 3224                                          29   5.9  
Lt_contig6559  |  | 1 to 5604                                          28   7.8  

>Lt_contig6185  |  | 1 to 5850
          Length = 5850

 Score =  226 bits (576), Expect = 2e-59
 Identities = 143/384 (37%), Positives = 206/384 (53%), Gaps = 17/384 (4%)
 Frame = -3

Query: 2    FQPEKHGLEPDFQLTKFTTHTGUSCKIPQKVLEKYLRGTEIENKNNDGYLIGSGMDCAVI 61
            F P   GL  +FQLT +T   G SCK+PQ  L   L+         D      G+DC+++
Sbjct: 5650 FDPVSLGLPAEFQLTDYTRLKGCSCKLPQPKLLTLLQELSATPGQKD-----VGVDCSIV 5486

Query: 62   PLKRHKD----YLLIQTVDFFYPMVNDPELLGRIALANVLSDVYAVGVTQFDTVEMIVST 117
            PL+R         L+ T DFF+P V+DP L G+I  ANVLSD+Y++G+   DT+ M+++ 
Sbjct: 5485 PLQRTNSKGEALFLVSTTDFFFPSVSDPFLQGQIGAANVLSDLYSMGIPDCDTMLMLLAA 5306

Query: 118  STSFSEKERDVVIGLVMKGFQNSLKANGYRNTPLIIRQLKINPWCIIGGIATSVCRSEEI 177
            ST   E ER +    +MKGF           T +   Q  +NPW +IGG+A +V    E+
Sbjct: 5305 STEMDEHERLITTREIMKGFAERAH---LATTTVTGGQTVMNPWPLIGGVAMAVVSEAEM 5135

Query: 178  ILPSN-AQPGDVLVLTKPLGGQMAMDAHLWQLNQTEKYKKLL-SECSDADIKETFEIAVK 235
            + P+   + GD+LVLTKPLG Q+A++   W L  +  Y+  +    S  +I+E + +A  
Sbjct: 5134 VRPTGLLRTGDILVLTKPLGCQVAVNLKQWLLRPSPLYEDAIKGHISPEEIEELYNMATD 4955

Query: 236  SMTYLNKNAALLMHKYQAHCATDITGFGLLGHANNLAQFQ-----KEKVLFQINKLPIIK 290
            SM  LN+  A LM K+ AH ATD+TGFG+LGHANN    Q        +   + +LP+ K
Sbjct: 4954 SMRRLNREGARLMRKHGAHGATDVTGFGILGHANNFGAAQTMGDAPRSLCLVLERLPMFK 4775

Query: 291  NVLKFSTLVGQSTKFRSGRSVETSGGLLICLP-ADAADKFCRDFEEATNGEQKSFQIGHV 349
              +  S  +    +   G S ETSGGLL+  P   AA+ FC +  E  +G   S+ +GHV
Sbjct: 4774 TAVAASKRMNDKYRLLEGYSPETSGGLLVAFPNTTAAEAFCAELTEVDDG-CPSWIVGHV 4598

Query: 350  --TAANESDAV---LCEDVEFIEV 368
               AA+  D V   L +  E +EV
Sbjct: 4597 EDRAASSVDGVYARLKDGYEIVEV 4526


>Lt_contig5903  |  | 1 to 13814
          Length = 13814

 Score = 32.0 bits (71), Expect = 0.70
 Identities = 21/63 (33%), Positives = 30/63 (47%)
 Frame = +2

Query: 293   LKFSTLVGQSTKFRSGRSVETSGGLLICLPADAADKFCRDFEEATNGEQKSFQIGHVTAA 352
             L F T+    ++  S R   TSG  L+ L +    + CRD  E  +G    F  G V+AA
Sbjct: 12962 LSFRTVSNGRSRMASRRGTSTSGVRLLKLKSRTRSRVCRDTAERKDGRLGRF--GDVSAA 13135

Query: 353   NES 355
             + S
Sbjct: 13136 SPS 13144


>Lt_contig5117  |  | 1 to 5653
          Length = 5653

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 13/33 (39%), Positives = 22/33 (66%)
 Frame = -2

Query: 250  KYQAHCATDITGFGLLGHANNLAQFQKEKVLFQ 282
            KY+ HC +  +GFG+LG  + L Q Q+ ++L +
Sbjct: 5646 KYERHCTSPSSGFGMLGVPSTL-QLQENELLLR 5551


>Lt_contig5269  |  | 1 to 3224
          Length = 3224

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 156  LKINPWCIIGGIATSVCRSEEIILPS 181
            LK  PWC + G +T   RS   +LP+
Sbjct: 2348 LKKRPWCTVSGASTHSARSPTSVLPA 2425


>Lt_contig6559  |  | 1 to 5604
          Length = 5604

 Score = 28.5 bits (62), Expect = 7.8
 Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
 Frame = -3

Query: 89   GRIALANVLSDVYAVGVTQFDTVEM-----IVSTSTSFSEKERDVVIGLVMKGFQNSLKA 143
            G + L +VLS    + ++ F+T  +     + STST  +E+++ +V+G   K +    KA
Sbjct: 3772 GCLCLRSVLSLDLDLSISNFNTFLVTRPPTVGSTSTGKAEEQKKIVLGGRGKVYGVRNKA 3593

Query: 144  NGYRNTP 150
            +  +NTP
Sbjct: 3592 HDIQNTP 3572


  Database: L.tarentolae/genome.fa
    Posted date:  Nov 21, 2011  7:46 PM
  Number of letters in database: 31,598,840
  Number of sequences in database:  7267
  
Lambda     K      H
   0.319    0.135    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,379,998
Number of Sequences: 7267
Number of extensions: 168975
Number of successful extensions: 663
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 491
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 149
Number of HSP's gapped (non-prelim): 532
length of query: 370
length of database: 10,532,946
effective HSP length: 101
effective length of query: 269
effective length of database: 9,798,979
effective search space: 2635925351
effective search space used: 2635925351
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)