TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000048_1.0 # Protein # Selenophosphate synthetase 2 (SPS2)
# Drosophila melanogaster # Complete
         (370 letters)

Database: L.donovani_BPK282A1/genome.fa 
           36 sequences; 32,444,998 total letters

Searching....................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

contig_36                                                             229   3e-60
contig_05                                                              30   2.9  
contig_35                                                              29   5.0  

>contig_36
          Length = 2713248

 Score =  229 bits (584), Expect = 3e-60
 Identities = 144/384 (37%), Positives = 210/384 (54%), Gaps = 17/384 (4%)
 Frame = -1

Query: 2       FQPEKHGLEPDFQLTKFTTHTGUSCKIPQKVLEKYLRGTEIENKNNDGYLIGSGMDCAVI 61
               F P   GL  +FQLT +T   G SCK+PQ  L   L+         D      GMDC+++
Sbjct: 2120613 FDPVSLGLPAEFQLTDYTRLKGCSCKLPQPKLLALLQELSTTPGQKD-----VGMDCSIV 2120449

Query: 62      PL----KRHKDYLLIQTVDFFYPMVNDPELLGRIALANVLSDVYAVGVTQFDTVEMIVST 117
               PL     + +   L+ T DFF+P V+DP L G+I  ANVLSD+Y++G+   DT+ M+++ 
Sbjct: 2120448 PLHHTNSKGEALFLVSTTDFFFPSVSDPFLQGQIGAANVLSDLYSMGIPDCDTMLMLLAA 2120269

Query: 118     STSFSEKERDVVIGLVMKGFQNSLKANGYRNTPLIIRQLKINPWCIIGGIATSVCRSEEI 177
               ST   E ER +    +MKGF    +      T +   Q  +NPW +IGG+A +V    E+
Sbjct: 2120268 STEMDEHERLITTREIMKGFAERAR---LATTTVTGGQTVMNPWPLIGGVAMAVVSEAEM 2120098

Query: 178     ILPSNAQ-PGDVLVLTKPLGGQMAMDAHLWQLNQTEKYKKLLS-ECSDADIKETFEIAVK 235
               + P+     GD+LVLTKPLG Q+A++   W L  +  Y++ ++   S  +I+E + +A  
Sbjct: 2120097 VRPAGLLCAGDILVLTKPLGCQVAVNLKQWLLRPSPLYEEAIAGHISPEEIEELYNMATD 2119918

Query: 236     SMTYLNKNAALLMHKYQAHCATDITGFGLLGHANNLAQFQ-----KEKVLFQINKLPIIK 290
               SM  LN+  A LM K+ AH ATD+TGFG+LGHANN    Q        +   + +LP+ K
Sbjct: 2119917 SMRRLNREGARLMRKHGAHGATDVTGFGILGHANNFGAAQTVGDAPRSLCLVLERLPMFK 2119738

Query: 291     NVLKFSTLVGQSTKFRSGRSVETSGGLLICLPA-DAADKFCRDFEEATNGEQKSFQIGHV 349
                 +  S  +    +   G S ETSGGLL+  P+  AA+ FC +   A +G   S+ +GHV
Sbjct: 2119737 TAVAASKRMNDKYRLLEGYSAETSGGLLVAFPSTTAAEAFCAEL-TAIDGGCPSWIVGHV 2119561

Query: 350     --TAANESDAV---LCEDVEFIEV 368
                  AAN +D V   L +  E +EV
Sbjct: 2119560 EDRAANVADGVYARLKDGYEIVEV 2119489


>contig_05
          Length = 452426

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 20/63 (31%), Positives = 29/63 (46%)
 Frame = -2

Query: 293    LKFSTLVGQSTKFRSGRSVETSGGLLICLPADAADKFCRDFEEATNGEQKSFQIGHVTAA 352
              L FST      +    R   T G  L+ L +    + CRD  E  +G  +S  +G V+AA
Sbjct: 218383 LSFSTASNGRPRMAWRRGASTCGVRLLKLKSSTRSRVCRDTTERKDG--RSGMLGDVSAA 218210

Query: 353    NES 355
              + S
Sbjct: 218209 SPS 218201


>contig_35
          Length = 2113966

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 42/178 (23%), Positives = 67/178 (37%), Gaps = 27/178 (15%)
 Frame = -2

Query: 186     GDVLVLTKPLGGQMAMD-AHLWQLNQTEKYKKLL---SECSDADIKETFEI------AVK 235
               G  +VL+  L   +A   +H+    Q ++Y  LL    +C   D++  + I       VK
Sbjct: 1221099 GSTVVLSSRLLATVASTFSHIGNAEQMQRYISLLLSHPDCRVRDVESVYSIYARLRDTVK 1220920

Query: 236     SMTYLNKNAALLMHKYQAHCATDITGFGLLGH----ANNLAQFQKE-------------K 278
                   L+   A  + K      T ++ F   G     A  L + +K+              
Sbjct: 1220919 LQELLD---AANLPKTPLIYNTCVSAFARAGEHAKVAFLLTEMEKQGFALSRNTSIILSS 1220749

Query: 279     VLFQINKLPIIKNVLKFSTLVGQSTKFRSGRSVETSGGLLICLPADAADKFCRDFEEA 336
               +L +  KL + + VLK+  L   +    SGR   T+G      PA      C   EEA
Sbjct: 1220748 LLLKAGKLELAQTVLKWKGLT--TADVESGRGASTNGAAAFSSPAHGDTPSCPSAEEA 1220581


  Database: L.donovani_BPK282A1/genome.fa
    Posted date:  Nov 21, 2011  7:46 PM
  Number of letters in database: 32,444,998
  Number of sequences in database:  36
  
Lambda     K      H
   0.319    0.135    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,410,642
Number of Sequences: 36
Number of extensions: 169273
Number of successful extensions: 633
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 614
Number of HSP's gapped (non-prelim): 83
length of query: 370
length of database: 10,814,999
effective HSP length: 102
effective length of query: 268
effective length of database: 10,811,327
effective search space: 2897435636
effective search space used: 2897435636
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)