TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000048_1.0 # Protein # Selenophosphate synthetase 2 (SPS2)
# Drosophila melanogaster # Complete
         (370 letters)

Database: F.cylindrus/genome.fa 
           271 sequences; 80,540,407 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

scaffold_21                                                           194   2e-49
scaffold_58                                                            30   7.1  
scaffold_22                                                            30   9.3  

>scaffold_21
          Length = 951085

 Score =  194 bits (494), Expect = 2e-49
 Identities = 126/354 (35%), Positives = 190/354 (53%), Gaps = 31/354 (8%)
 Frame = -2

Query: 46     NNDGYLIGS-GMDCAVIPLKRHKDYLLIQTVDFFYPMVNDPELLGRIALANVLSDVYAVG 104
              NN G   G   +DC++   +  + + +I T DFF+P+V+ P L GRI  ANVLSD+YA G
Sbjct: 153072 NNLGTADGRIALDCSI--RETRQGHYVISTTDFFFPLVDSPYLQGRIGAANVLSDLYAEG 152899

Query: 105    VTQFDTVEMIVSTSTSFSEKERDVVIGLVMKGFQNSLKANGYRNTPLIIRQLKINPWCII 164
              V   D V M+++ S   + ++R +   L+++GF+++        T +   Q  +NPW II
Sbjct: 152898 VQHCDFVLMLLAASLDMTPQDRTICTNLMVRGFRDACTE---AETTITGGQTVLNPWAII 152728

Query: 165    GGIATSVCRSEEIILPSNAQPGDVLVLTKPLGGQMAMDAHLWQLNQTEKYK--------- 215
              GG+ATSV   +E +    A  GDV+VLTKP+G Q+A++ H W+    +K K         
Sbjct: 152727 GGVATSVVTRDEYVSSDGACVGDVIVLTKPIGTQIAVNVHEWRKRHEKKAKNGDTTGDKN 152548

Query: 216    --KLLSECSDAD----IKET---FEIAVKSMTYLNKNAALLMHKYQAHCATDITGFGLLG 266
                K+L +  + D    + E+      AV+SM+ LN+  + LM K+ AH  TD+TGFGLLG
Sbjct: 152547 WNKILEQNKNGDEFLTVSESEIMMHAAVRSMSKLNRFGSKLMTKHNAHAGTDVTGFGLLG 152368

Query: 267    HANNLAQFQKEKVLFQINKLPIIKNVLKFSTLVGQSTKFRSGRSVETSGGLLICLPADAA 326
              HA NL   Q  KV  +++  P I N LK +  +  + + R G S ETSGGL+I +    A
Sbjct: 152367 HAQNLMDNQIAKVGIELHTFPCIANTLKINDNI-MNFRLRDGYSAETSGGLMISMTEADA 152191

Query: 327    DKFCRDFEE----ATNGEQKS--------FQIGHVTAANESDAVLCEDVEFIEV 368
                +C +  E    A N    S        + IG V  + +  A + ED  ++EV
Sbjct: 152190 IAYCAELREVETVAYNYNTSSDAGTDFGPWIIGRVVESADRKATITEDAVYLEV 152029



 Score = 30.0 bits (66), Expect = 7.1
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = -1

Query: 2      FQPEKHGLEPDFQLTKFTTHTGUSCKIPQKVLEKYL 37
              F P   GL   + LT F+   G +CKIPQ  L+  L
Sbjct: 153418 FDPTSVGLPEGWSLTDFSDLKG*ACKIPQNELQDML 153311


>scaffold_58
          Length = 317980

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
 Frame = -1

Query: 32     VLEKYLRGTEIENKNNDGYLI-----GSGMDCAVIPLKRHKDYLLIQTVDFFYP 80
              +L K L   E+  K+ DG  +        +   V+PL  H+DYL++  VD +YP
Sbjct: 282562 LLPKQLEVMEVC*KHGDGREVLKDDDDDALRYVVVPLMHHQDYLILD-VDVYYP 282404


>scaffold_22
          Length = 950298

 Score = 29.6 bits (65), Expect = 9.3
 Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
 Frame = -1

Query: 216    KLLSECSDADIK-ETFEIAVKSMTYLNKNAALLMHKYQAHCATDITGFGLLGHANNLA 272
              K+L  C D D+    F+  V S  Y+N+N    +H +       +TG     H N ++
Sbjct: 453696 KVLRHCFDVDVVVAVFDEVVASSKYINQNPYFYLH*FGLFLRAHVTGNR*ESHGNEIS 453523


  Database: F.cylindrus/genome.fa
    Posted date:  Nov 21, 2011  7:46 PM
  Number of letters in database: 80,540,407
  Number of sequences in database:  271
  
Lambda     K      H
   0.319    0.135    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,603,916
Number of Sequences: 271
Number of extensions: 405415
Number of successful extensions: 1574
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1477
Number of HSP's gapped (non-prelim): 215
length of query: 370
length of database: 26,846,802
effective HSP length: 108
effective length of query: 262
effective length of database: 26,817,534
effective search space: 7026193908
effective search space used: 7026193908
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)