TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000048_1.0 # Protein # Selenophosphate synthetase 2 (SPS2)
# Drosophila melanogaster # Complete
         (370 letters)

Database: D.fasciculatum/genome.fa 
           25 sequences; 31,019,208 total letters

Searching.........................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|328864870|gb|GL883029.1| Dictyostelium fasciculatum unplaced ...   200   1e-56
gi|328870360|gb|GL883017.1| Dictyostelium fasciculatum unplaced ...    31   1.7  

>gi|328864870|gb|GL883029.1| Dictyostelium fasciculatum unplaced genomic
              scaffold Scf_EUAJFUG02HR96I-5, whole genome shotgun
              sequence
          Length = 3408800

 Score =  200 bits (508), Expect(2) = 1e-56
 Identities = 120/317 (37%), Positives = 175/317 (55%), Gaps = 25/317 (7%)
 Frame = -2

Query: 77     FFYPMVNDPELLGRIALANVLSDVYAVGVTQFDTVEMIVSTSTSFSEKERDVVIGLVMKG 136
              FF+P  +DP L+G+IA ANVLSD+Y+ G+   D + MI++ ST  + ++R      ++ G
Sbjct: 338566 FFFPNCDDPYLMGKIACANVLSDLYSFGIADCDNMLMILAGSTDMTPEQRTWSTRGMING 338387

Query: 137    FQN---------------------SLKANGYRNTPLIIRQLKINPWCIIGGIATSVCRSE 175
              F                       SL       T +   Q   NPW IIGG+ATSV + +
Sbjct: 338386 FNGIYLHQR**FFLLFINLFYFFYSLDNAKIAGTNITGGQTVKNPWPIIGGVATSVVKKD 338207

Query: 176    EIILPSNAQPGDVLVLTKPLGGQMAMDAHLWQLNQTEKYKKLLSECSDADIKETFEIAVK 235
              E I+P  A  GDVLVLTKPLG Q+  +AH W     EK++++    +   I E +  AV 
Sbjct: 338206 EFIMPVGAVAGDVLVLTKPLGTQVCANAHQWLQGFPEKWERITGVVTREQIIECWAYAVN 338027

Query: 236    SMTYLNKNAALLMHKYQAHCATDITGFGLLGHANNLAQFQKEKVLFQINKLPIIKNVLKF 295
              SM  LN+  A +M K+ AH  TD+TGFGLLGH+ NLA+ Q   V F+I+ LPI++ +++ 
Sbjct: 338026 SMARLNRTGARMMMKHGAHACTDVTGFGLLGHSMNLAKNQNAAVYFEIDTLPIMQGMVEI 337847

Query: 296    STLVGQSTKFRSGRSVETSGGLLICLPADAADKFCRDFEEATNGEQKSFQIGHVTAA--- 352
                 +  +     G S ETSGGLL+ LPAD A  F  D +E    +Q ++ IG V A+   
Sbjct: 337846 DATLNYNYNLLKGMSAETSGGLLVALPADKAQAFIDDMQEI--DKQPAWIIGKVKASDKP 337673

Query: 353    -NESDAVLCEDVEFIEV 368
               +E+ + L +++  I V
Sbjct: 337672 QSENYSYLVDNLNIINV 337622



 Score = 38.5 bits (88), Expect(2) = 1e-56
 Identities = 26/65 (40%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
 Frame = -1

Query: 14     QLTKFTTHTGUSCKIPQKVLEKYLRGTEIENKNNDGYLIGSGM--DCAVIPLKRHKDYLL 71
              +LT FT   G  CKIPQK L   L G            IGSG+  DC+V+P K   D ++
Sbjct: 338813 KLTDFTKLKG*GCKIPQKELLSLLEG------------IGSGIGFDCSVVPTK-FNDIVM 338673

Query: 72     IQTVD 76
              + T D
Sbjct: 338672 VSTTD 338658


>gi|328870360|gb|GL883017.1| Dictyostelium fasciculatum unplaced genomic
              scaffold Scf_Dfasci-G-b-190b03.r1-5, whole genome shotgun
              sequence
          Length = 548609

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = -3

Query: 40     TEIENKNNDGYLIGSGMDCAVIPLKRHKDYLLIQTVDFFY 79
              TEI   N+DG+LIGS     +    R K+ LL+  +++F+
Sbjct: 124323 TEIAVVNDDGHLIGSFSSSDLRVCNRKKELLLLYFINYFF 124204


  Database: D.fasciculatum/genome.fa
    Posted date:  Nov 21, 2011  7:46 PM
  Number of letters in database: 31,019,208
  Number of sequences in database:  25
  
Lambda     K      H
   0.319    0.135    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,610,010
Number of Sequences: 25
Number of extensions: 165062
Number of successful extensions: 662
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 628
Number of HSP's gapped (non-prelim): 105
length of query: 370
length of database: 10,339,736
effective HSP length: 101
effective length of query: 269
effective length of database: 10,337,211
effective search space: 2780709759
effective search space used: 2780709759
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)