TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000056_1.0 # Protein # Selenophosphate synthetase 2 (SPS2)
# Anopheles gambiae # Complete
         (369 letters)

Database: T.congolense/genome.fa 
           11 sequences; 22,287,946 total letters

Searching...........done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

TcIL3000_10_v2.embl                                                   221   5e-58
T.congo.pschr.11                                                       32   0.53 

>TcIL3000_10_v2.embl
          Length = 3612457

 Score =  221 bits (563), Expect = 5e-58
 Identities = 123/356 (34%), Positives = 193/356 (54%), Gaps = 7/356 (1%)
 Frame = +1

Query: 2       FKPESYGLSHDFRLTKFSTLRGUGSKVPQDVLNRLLAGVYGEQLGDKDGKGPNKEEGVGI 61
               F+P   GL  +F LT ++ L+G   K+PQ  L  LL  V     G KD            
Sbjct: 2071891 FEPSQLGLPDEFILTDYARLKGCSCKLPQPELLALLQRVSATP-GQKDA----------- 2072034

Query: 62      GLDSSVIALKH------DLFLVQSVDFFYPLIDDPFMLGKIALANVVSDVFAVGATEIDQ 115
               G+D S++ L+H       L++V + DFF+P ++DP++ G+I  ANV+SD+++ G    D 
Sbjct: 2072035 GMDCSIVKLQHKDESGNQLYMVSTTDFFFPSVEDPYLQGQIGAANVLSDLYSTGIYRCDT 2072214

Query: 116     IKLIVTAPTEFTEQEREVVVPMVMQGFLEAAKACNAPVQIGSIAENPWCVIGGAASAVCH 175
               + +++ A T+  + ER++    +M+GF++  +   + V  G    NPW +IGG A +V  
Sbjct: 2072215 VLMLLAASTDMDKTERDICTREMMKGFVDHVRLAGSDVTGGQTVMNPWPLIGGIAMSVVP 2072394

Query: 176     RSELIMPYNAQPGDALVLTKPLGTQLATNAYIWMGEQQSDSWAQLRERFTVADIEQTYRI 235
                S+++ P   +PGD LVLTKPLG Q+A N   W+        ++++ +  + +I++ Y  
Sbjct: 2072395 ESQMVRPTGLRPGDILVLTKPLGCQIAVNLKQWIHRPSPIYESRIQGKMDLEEIDELYCA 2072574

Query: 236     ALESMSRLNKTGAELMKKYGAHAATDVTGFGLYGHAENLASHQTADVDFHLDTLPIIKNV 295
               A E M RLN+  A LM  + AH ATDVTGFG+ GHA NL   Q A +   L++LP+ K  
Sbjct: 2072575 AAEGMKRLNREAARLMCVHKAHGATDVTGFGIIGHATNLGGAQEAKLCLVLNSLPMYKGA 2072754

Query: 296     REIAETLGRGAKLLAGKAVETSGGLLICLPR-EAAAGFCEEYRRCTKHEAWIVGHV 350
                + +  +    +L  G + ETSGGLL+       A  +  + R      AW+VG V
Sbjct: 2072755 VKASRLMDDKFRLFEGYSAETSGGLLVAFEDVTTAERYIRDLRDADGEPAWVVGRV 2072922


>T.congo.pschr.11
          Length = 4797796

 Score = 32.0 bits (71), Expect = 0.53
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
 Frame = -1

Query: 206     YIWMGEQ---QSDSWAQLRERFTVADIEQTYRIALESMSRLNKTGAELMKKYGAH 257
               YI++  Q   + ++W + + R+T++D  Q++ I L   S L KT  +  +K G H
Sbjct: 3134695 YIYIRTQIKIKDEAWRKTK*RYTISDTFQSHIIYLSFCSELIKTNKQTKEKCGYH 3134531


  Database: T.congolense/genome.fa
    Posted date:  Nov 21, 2011  7:47 PM
  Number of letters in database: 22,287,946
  Number of sequences in database:  11
  
Lambda     K      H
   0.319    0.136    0.399 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,764,923
Number of Sequences: 11
Number of extensions: 125708
Number of successful extensions: 569
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 521
Number of HSP's gapped (non-prelim): 172
length of query: 369
length of database: 7,429,315
effective HSP length: 99
effective length of query: 270
effective length of database: 7,428,226
effective search space: 2005621020
effective search space used: 2005621020
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)