TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000056_1.0 # Protein # Selenophosphate synthetase 2 (SPS2)
# Anopheles gambiae # Complete
         (369 letters)

Database: P.capsici/genome.fa 
           917 sequences; 64,023,748 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PHYCAscaffold_49                                                      274   1e-73
PHYCAscaffold_33                                                       33   0.51 

>PHYCAscaffold_49
          Length = 508508

 Score =  274 bits (701), Expect = 1e-73
 Identities = 156/411 (37%), Positives = 226/411 (54%), Gaps = 44/411 (10%)
 Frame = -3

Query: 2     FKPESYGLSHDFRLTKFSTLRGUGSKVPQDVLNRLLAGVYGEQLGDKDGKGPNKEEGVGI 61
             F P S GL  DF LT FS L+G G K+PQ  L           LG  D    + +     
Sbjct: 85458 FDPTSLGLEADFVLTNFSALKGCGCKLPQAKL-----------LGYLDDLANDLKPNETP 85312

Query: 62    GLDSSVIALKH--DLFLVQSVDFFYPLIDDPFMLGKIALANVVSDVFAVGATEIDQIKLI 119
             G+DSSV+ + H  DL+LV + DFF+P ++DP++ GKIA ANV+SD +A+G TE+D + +I
Sbjct: 85311 GMDSSVVKISHGTDLYLVSTTDFFFPSVEDPYVQGKIACANVLSDAYAMGVTEVDTMLMI 85132

Query: 120   VTAPTEFTEQEREVVVPMVMQGFLEAAKACNAPVQIGSIAENPWCVIGGAASAVCH---- 175
             +    + +E++R+VV   +++GF + A+  +  V  G    NPW ++GG A +V      
Sbjct: 85131 LGVCRDMSEKQRDVVTTQMIRGFNDLARQAHTNVTGGQTVMNPWPIVGGVAMSVRSG**K 84952

Query: 176   -----------------RSELIMPYNAQPGDALVLTKPLGTQLATNAYIWMGEQQSDSWA 218
                               S++I P NA  GD ++LTKPLGTQ+A N + W  +++ + W 
Sbjct: 84951 LSIQHL*LI*D*RVFPAESQIIRPENAVVGDVIILTKPLGTQVAVNLFQW--KKKPERWQ 84778

Query: 219   QLRERFTVADIEQTYRIALESMSRLNKTGAELMKK---------------------YGAH 257
             ++    T  D +  +++A ESMSRLN   A++M K                     YGAH
Sbjct: 84777 RVESIVTPEDADVAFQMASESMSRLNLNAAKMMHKVR*VFCLLPFITY*LSLSLC*YGAH 84598

Query: 258   AATDVTGFGLYGHAENLASHQTADVDFHLDTLPIIKNVREIAETLGRGAKLLAGKAVETS 317
             +ATDVTGFG+  HA N A  Q  DV F + TLPIIKN+ ++ E +G   KLL G A ETS
Sbjct: 84597 SATDVTGFGIVAHARNQAKSQLGDVSFEIHTLPIIKNMAKVNEAIGNSFKLLDGFAAETS 84418

Query: 318   GGLLICLPREAAAGFCEEYRRCTKHEAWIVGHVEKGARGVKMNPNLNILSV 368
             GGLL+CLP E A  + +E R      AW+VG V  G++   + P+  ++ V
Sbjct: 84417 GGLLLCLPAENADAYIKELRELDGKPAWVVGRVVAGSKDAYIAPDSKVIEV 84265


>PHYCAscaffold_33
          Length = 640966

 Score = 33.5 bits (75), Expect = 0.51
 Identities = 31/93 (33%), Positives = 43/93 (46%)
 Frame = -3

Query: 75     FLVQSVDFFYPLIDDPFMLGKIALANVVSDVFAVGATEIDQIKLIVTAPTEFTEQEREVV 134
              +++   D F P   D  +L K + A+  S+ F    TE    K   TAPT FT + R   
Sbjct: 489194 YVINQPDPFKPSA*D--VLSKTSDASS-SN*FTTVHTETSNSKRPTTAPTFFTSKFRRKS 489024

Query: 135    VPMVMQGFLEAAKACNAPVQIGSIAENPWCVIG 167
              +P V    L     C A V + SI+ +P  VIG
Sbjct: 489023 LPSVTSSQLHVCMYCEACVAV-SISSSPRPVIG 488928


  Database: P.capsici/genome.fa
    Posted date:  Nov 21, 2011  7:46 PM
  Number of letters in database: 64,023,748
  Number of sequences in database:  917
  
Lambda     K      H
   0.319    0.136    0.399 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,798,838
Number of Sequences: 917
Number of extensions: 345950
Number of successful extensions: 1571
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 1390
Number of HSP's gapped (non-prelim): 579
length of query: 369
length of database: 21,341,249
effective HSP length: 106
effective length of query: 263
effective length of database: 21,244,047
effective search space: 5587184361
effective search space used: 5587184361
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)