TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000056_1.0 # Protein # Selenophosphate synthetase 2 (SPS2)
# Anopheles gambiae # Complete
         (369 letters)

Database: D.fasciculatum/genome.fa 
           25 sequences; 31,019,208 total letters

Searching.........................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|328864870|gb|GL883029.1| Dictyostelium fasciculatum unplaced ...   228   5e-60

>gi|328864870|gb|GL883029.1| Dictyostelium fasciculatum unplaced genomic
              scaffold Scf_EUAJFUG02HR96I-5, whole genome shotgun
              sequence
          Length = 3408800

 Score =  228 bits (581), Expect = 5e-60
 Identities = 127/323 (39%), Positives = 182/323 (56%), Gaps = 29/323 (8%)
 Frame = -2

Query: 75     FLVQSVDFFYPLIDDPFMLGKIALANVVSDVFAVGATEIDQIKLIVTAPTEFTEQEREVV 134
              F   S  FF+P  DDP+++GKIA ANV+SD+++ G  + D + +I+   T+ T ++R   
Sbjct: 338587 FNFNSF*FFFPNCDDPYLMGKIACANVLSDLYSFGIADCDNMLMILAGSTDMTPEQRTWS 338408

Query: 135    VPMVMQGF------------------------LEAAKACNAPVQIGSIAENPWCVIGGAA 170
                 ++ GF                        L+ AK     +  G   +NPW +IGG A
Sbjct: 338407 TRGMINGFNGIYLHQR**FFLLFINLFYFFYSLDNAKIAGTNITGGQTVKNPWPIIGGVA 338228

Query: 171    SAVCHRSELIMPYNAQPGDALVLTKPLGTQLATNAYIWMGEQQSDSWAQLRERFTVADIE 230
              ++V  + E IMP  A  GD LVLTKPLGTQ+  NA+ W+ +   + W ++    T   I 
Sbjct: 338227 TSVVKKDEFIMPVGAVAGDVLVLTKPLGTQVCANAHQWL-QGFPEKWERITGVVTREQII 338051

Query: 231    QTYRIALESMSRLNKTGAELMKKYGAHAATDVTGFGLYGHAENLASHQTADVDFHLDTLP 290
              + +  A+ SM+RLN+TGA +M K+GAHA TDVTGFGL GH+ NLA +Q A V F +DTLP
Sbjct: 338050 ECWAYAVNSMARLNRTGARMMMKHGAHACTDVTGFGLLGHSMNLAKNQNAAVYFEIDTLP 337871

Query: 291    IIKNVREIAETLGRGAKLLAGKAVETSGGLLICLPREAAAGFCEEYRRCTKHEAWIVGHV 350
              I++ + EI  TL     LL G + ETSGGLL+ LP + A  F ++ +   K  AWI+G V
Sbjct: 337870 IMQGMVEIDATLNYNYNLLKGMSAETSGGLLVALPADKAQAFIDDMQEIDKQPAWIIGKV 337691

Query: 351    EKGARGVKMN-----PNLNILSV 368
              +   +    N      NLNI++V
Sbjct: 337690 KASDKPQSENYSYLVDNLNIINV 337622


  Database: D.fasciculatum/genome.fa
    Posted date:  Nov 21, 2011  7:46 PM
  Number of letters in database: 31,019,208
  Number of sequences in database:  25
  
Lambda     K      H
   0.319    0.136    0.399 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,490,692
Number of Sequences: 25
Number of extensions: 126882
Number of successful extensions: 479
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 456
Number of HSP's gapped (non-prelim): 52
length of query: 369
length of database: 10,339,736
effective HSP length: 101
effective length of query: 268
effective length of database: 10,337,211
effective search space: 2770372548
effective search space used: 2770372548
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)