TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000056_1.0 # Protein # Selenophosphate synthetase 2 (SPS2)
# Anopheles gambiae # Complete
         (369 letters)

Database: C.fasciculata/genome.fa 
           1089 sequences; 37,048,325 total letters

Searching...................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Cf_Contig765  |  | 1 to 162644                                        225   4e-59
Cf_Contig946  |  | 1 to 179534                                         36   0.060
Cf_Contig1047  |  | 1 to 300975                                        31   1.9  
Cf_Contig1010  |  | 1 to 178774                                        31   1.9  
Cf_Contig941  |  | 1 to 68895                                          30   2.5  
Cf_Contig1048  |  | 1 to 336746                                        30   3.3  
Cf_Contig1041  |  | 1 to 166514                                        30   3.3  
Cf_Contig1069  |  | 1 to 371363                                        29   5.6  
Cf_Contig852  |  | 1 to 29077                                          29   7.3  
Cf_Contig972  |  | 1 to 178207                                         28   9.6  

>Cf_Contig765  |  | 1 to 162644
          Length = 162644

 Score =  225 bits (574), Expect = 4e-59
 Identities = 141/367 (38%), Positives = 194/367 (52%), Gaps = 14/367 (3%)
 Frame = +3

Query: 2      FKPESYGLSHDFRLTKFSTLRGUGSKVPQDVLNRLLAGVYGEQLGDKDGKGPNKEEGVGI 61
              F P S GL  +F+LT ++ L+G   K+PQ  L  LL  V     G KD           +
Sbjct: 101625 FDPVSLGLPAEFQLTDYTRLKGCSCKLPQPKLLALLQAV-ATSPGQKD-----------V 101768

Query: 62     GLDSSVIALKHD------LFLVQSVDFFYPLIDDPFMLGKIALANVVSDVFAVGATEIDQ 115
              G+D S++ L H       LFLV + DFF+P + DPF+ G I  ANV+SD++++G    D 
Sbjct: 101769 GMDCSIVPLHHTNGKGEALFLVSTTDFFFPSVADPFLQGHIGAANVLSDLYSMGIAHCDT 101948

Query: 116    IKLIVTAPTEFTEQEREVVVPMVMQGFLEAAKACNAPVQIGSIAENPWCVIGGAASAVCH 175
              + +++ A T+  E ER V    +M+GF E A+     V  G    NPW +IGG A AV  
Sbjct: 101949 MLMLLAASTDMDEDERLVTTREIMRGFAERARLAATSVTGGQTVMNPWPLIGGVAMAVVS 102128

Query: 176    RSELIMPYN-AQPGDALVLTKPLGTQLATNAYIWMGEQQSDSWAQLRERFTVADIEQTYR 234
               +E++ P    + GD LVLTKPLG Q+A N   W+          +    +  +IE+ Y 
Sbjct: 102129 EAEMVRPAGLLRAGDVLVLTKPLGCQIAMNLKQWLMRPSPLYEDVIEGHISRDEIEELYN 102308

Query: 235    IALESMSRLNKTGAELMKKYGAHAATDVTGFGLYGHAENLASHQTA-----DVDFHLDTL 289
               A +SM RLN+ GA LM K+GAH ATDVTGFG+ GHA N  + Q        +   LD L
Sbjct: 102309 KATDSMRRLNREGARLMLKHGAHGATDVTGFGILGHANNFGAAQAVGSAPQSLCLVLDRL 102488

Query: 290    PIIKNVREIAETLGRGAKLLAGKAVETSGGLLICL-PREAAAGFCEEYRRCTKH-EAWIV 347
              P++K     +  +    +L  G + ETSGGLL+ L  REAA  F +E         +WIV
Sbjct: 102489 PMLKTAVAASRLMQDKYRLFEGYSAETSGGLLVALASREAAEAFQKELEEADGGCPSWIV 102668

Query: 348    GHVEKGA 354
              G VE  A
Sbjct: 102669 GRVEARA 102689


>Cf_Contig946  |  | 1 to 179534
          Length = 179534

 Score = 35.8 bits (81), Expect = 0.060
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = -2

Query: 304    RGAKLLAGKAVETSGGLLICLPREAAAGFCEEYRRCTKHEAWIVGHVEKG 353
              R A ++ G  V  +G  ++C+    A G  E+ RRCT+H    +G V  G
Sbjct: 128473 RAAAVVCGAVVSRTGHPIVCVAEFGAGGVAEDGRRCTRHREAGLGVVGAG 128324


>Cf_Contig1047  |  | 1 to 300975
          Length = 300975

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
 Frame = -1

Query: 320   LLICLPREAAAGFC-----EEYRRCTKHEAWIVGHVEKGARGV 357
             ++  + R+ AAG C        RRC  +E  +VGH+  GAR V
Sbjct: 70566 VVAAVERDVAAGCCGPAADTRLRRCGVYEGHVVGHLHLGARTV 70438


>Cf_Contig1010  |  | 1 to 178774
          Length = 178774

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
 Frame = +1

Query: 320   LLICLPREAAAGFC-----EEYRRCTKHEAWIVGHVEKGARGV 357
             ++  + R+ AAG C        RRC  +E  +VGH+  GAR V
Sbjct: 45223 VVAAVERDVAAGCCGPAADTRLRRCGVYEGHVVGHLHLGARTV 45351


>Cf_Contig941  |  | 1 to 68895
          Length = 68895

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -1

Query: 155   IGSIAENPWCVIGGAASAVCHRSELIMPYNAQPGDAL 191
             +G +AE PW ++  AA+ VC           QP +AL
Sbjct: 32742 VGELAEAPWVMLAAAAATVCCHRRHRSSSTTQPSNAL 32632


>Cf_Contig1048  |  | 1 to 336746
          Length = 336746

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 38/157 (24%), Positives = 60/157 (38%), Gaps = 28/157 (17%)
 Frame = +3

Query: 186    QPGDALVLTKPLGTQLATNAY-----IWMGEQQSD------------------SW----- 217
              Q G+ LV+ + +  +L   AY     IW G+QQ                    SW     
Sbjct: 113346 QHGEKLVVVRQVTEELLNPAYVGHFGIWHGKQQRRQQPACPPLPPVVQTQFRASW*VQQR 113525

Query: 218    AQLRERFTVADIEQTYRIALESMSRLNKTGAELMKKYGAHAATDVTGFGLYGHAENLASH 277
               Q ++   V D ++   + L+ + +  + G +L+   GA A + V   G       L   
Sbjct: 113526 HQGQQPCRVLDAKRHICLLLQRLEQHLRCGVQLL--LGAAAGSRVAAKGRQHRLSLLRCV 113699

Query: 278    QTADVDFHLDTLPIIKNVREIAETLGRGAKLLAGKAV 314
                         LP+   VR++ E +GRG   L G AV
Sbjct: 113700 GVTSTFVQCHALPVTLPVRKVGEVVGRGQ--LPGNAV 113804


>Cf_Contig1041  |  | 1 to 166514
          Length = 166514

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -1

Query: 155   IGSIAENPWCVIGGAASAVCHRSELIMPYNAQPGDAL 191
             +G +AE PW ++  AA+ VC           QP  AL
Sbjct: 88121 VGELAEAPWVMLAAAAATVCCHRRHRSSSTTQPSSAL 88011


>Cf_Contig1069  |  | 1 to 371363
          Length = 371363

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 17/58 (29%), Positives = 27/58 (46%)
 Frame = +3

Query: 170    ASAVCHRSELIMPYNAQPGDALVLTKPLGTQLATNAYIWMGEQQSDSWAQLRERFTVA 227
              A+A     ++  P++ +PG       PL  QL  + + W G Q+  +  Q R R T A
Sbjct: 334599 ANACAESPQIRNPHHRRPGS*PDSMGPLAAQLPADVHPWPGLQRQTAAIQQRRRATPA 334772


>Cf_Contig852  |  | 1 to 29077
          Length = 29077

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 20/64 (31%), Positives = 32/64 (50%)
 Frame = -1

Query: 261  DVTGFGLYGHAENLASHQTADVDFHLDTLPIIKNVREIAETLGRGAKLLAGKAVETSGGL 320
            DVTG  L  HAEN A+H    ++ H+  L     +  IA  L    +L+   ++  +G +
Sbjct: 4558 DVTGDDLLVHAEN-AAHARRHLEVHIHLL-----ISGIAVKLTETHQLVGAASLRAAGPV 4397

Query: 321  LICL 324
             +CL
Sbjct: 4396 ELCL 4385


>Cf_Contig972  |  | 1 to 178207
          Length = 178207

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = +3

Query: 162    PWCVIGGAASAVCHRSELIMPYNAQPGDALVLTKPL 197
              PWCV+GG    VC    L  P  +     L+ TK L
Sbjct: 166710 PWCVVGGLVECVCKGFVLKAPP*SSSEGLLLSTKNL 166817


  Database: C.fasciculata/genome.fa
    Posted date:  Nov 21, 2011  7:46 PM
  Number of letters in database: 37,048,325
  Number of sequences in database:  1089
  
Lambda     K      H
   0.319    0.136    0.399 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,906,484
Number of Sequences: 1089
Number of extensions: 231875
Number of successful extensions: 1444
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 110
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 1173
Number of HSP's gapped (non-prelim): 592
length of query: 369
length of database: 12,349,441
effective HSP length: 103
effective length of query: 266
effective length of database: 12,237,274
effective search space: 3255114884
effective search space used: 3255114884
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)