TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|70879148|gb|EAN92345.1| hypothetical protein, conserved [Trypanosoma cruzi] (386 letters) Database: F.cylindrus/genome.fa 271 sequences; 80,540,407 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value scaffold_6 45 2e-04 scaffold_7 34 0.52 scaffold_52 33 0.68 scaffold_15 31 4.4 scaffold_94 30 5.8 scaffold_55 30 7.5 scaffold_45 30 7.5 scaffold_22 30 7.5 >scaffold_6 Length = 2967614 Score = 45.1 bits (105), Expect = 2e-04 Identities = 51/207 (24%), Positives = 92/207 (44%), Gaps = 5/207 (2%) Frame = +1 Query: 5 LVLLSGLPGAGKTTLSLAIQRLSE---QVTTEGERSNSRHGGVVEAVLELDTFI-SSYEE 60 ++LL+GLP +GK++L+ +++ + T + R + VLE D + SS EE Sbjct: 516973 VILLAGLPASGKSSLAQKLRKQFDYHNNTCTTDDCHRRRLIHIEYDVLEEDLLLLSSTEE 517152 Query: 61 RDGTQRNGSNFSPEAWRRACDEVREATFQRIRQCLLNPEKKRGRNMSSTTTRFVFLVD-T 119 + T N R A ++ R+ +++ + + + + S +T + L+D Sbjct: 517153 YEETSNNDDTCWKNRRRDAWNQARQIAIEQMEKEMQSETVINDDSSSRRSTNTIILMDDN 517332 Query: 120 LPYRSMRASYWKLCRDLGKEQFQHKLERDGVMNKCDGRVPFDAVFVNMVEIRLNTPIEIC 179 R MR ++ R L + Q Q + + + F +++ TPI IC Sbjct: 517333 FHLRGMRK---QIHRSLLRYQQQQQ------STSLNMNLRFGTLYIK-------TPINIC 517464 Query: 180 LERNERRTETPQYVPPHVIKNMGGSFD 206 LERN R+ + VP VI M +F+ Sbjct: 517465 LERNRVRSGR-RRVPDDVIIKMDAAFE 517542 >scaffold_7 Length = 2770240 Score = 33.9 bits (76), Expect = 0.52 Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 10/161 (6%) Frame = +3 Query: 5 LVLLSGLPGAGKTTLSLAIQRLSEQVTTEGERSNSRHGGVVEAVLELDTFISSYEERDGT 64 L ++ G PG+GKTT++ + E ++ + + N++H +E L+LD IS E +D Sbjct: 1923996 LFIVFGRPGSGKTTVA---NKAFESLSLDNNK-NNKHQQCIE--LDLDVCISQ-EMKDNF 1924154 Query: 65 QRNGSNFSPEAWRR------ACDEVREATFQRIRQCLLNPEKKRGRNMSSTTTRFVF--- 115 G P R ACD V + +++ +C ++++ N+S+ + F F Sbjct: 1924155 ---GRGIYPSLKERNVFASGACDYVEKQLDEKLLKCQQQKQQQKDFNLSAIIS-FSFVNT 1924322 Query: 116 -LVDTLPYRSMRASYWKLCRDLGKEQFQHKLERDGVMNKCD 155 L D R +A W L +E + ER+G K D Sbjct: 1924323 DLRDIFRERFPKAE-WILIDTTEEECTKRINEREGHFYKGD 1924442 >scaffold_52 Length = 408677 Score = 33.5 bits (75), Expect = 0.68 Identities = 29/111 (26%), Positives = 55/111 (49%), Gaps = 7/111 (6%) Frame = +1 Query: 5 LVLLSGLPGAGKTTLSLAIQRLSEQVTTEGERSNSRHGGVVEAVLELDTFISSYEERDGT 64 L ++ G PG+GKTT++ + E ++ + + N++H +E L+LD IS G Sbjct: 322765 LFIVFGRPGSGKTTVA---NKAFESLSLDNNK-NNKHQQCIE--LDLDVCIS-----QGM 322911 Query: 65 QRN-GSNFSPEAWRR------ACDEVREATFQRIRQCLLNPEKKRGRNMSS 108 + N G P R ACD V + +++ +C ++++ N+S+ Sbjct: 322912 KDNFGKGIYPSLKERSVFASGACDYVEKQLDEKLLKCQQQKQQQKDFNLSA 323064 >scaffold_15 Length = 1348792 Score = 30.8 bits (68), Expect = 4.4 Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 1/131 (0%) Frame = -3 Query: 77 RRACDEVREATFQRIRQCLLNPEKKRGRNMSSTTTRFVFLVD-TLPYRSMRASYWKLCRD 135 R A ++ R+ +++ + + + + S +T V L+D R MR + R Sbjct: 645578 RDAWNQARQIAIKQMEKEIQSETVINDDSSSRRSTNTVILMDDNFHLRGMRKQIY---RS 645408 Query: 136 LGKEQFQHKLERDGVMNKCDGRVPFDAVFVNMVEIRLNTPIEICLERNERRTETPQYVPP 195 L + Q QH+ MN + F +++ TPI ICLERN R+ + VP Sbjct: 645407 LLRHQ-QHQQPTSMNMN-----LRFGTLYIK-------TPINICLERNRLRSGR-RRVPD 645270 Query: 196 HVIKNMGGSFD 206 VI M +F+ Sbjct: 645269 DVIIKMDAAFE 645237 >scaffold_94 Length = 135709 Score = 30.4 bits (67), Expect = 5.8 Identities = 17/74 (22%), Positives = 33/74 (44%) Frame = +3 Query: 163 VFVNMVEIRLNTPIEICLERNERRTETPQYVPPHVIKNMGGSFDVGVDTSAKFSADDNCW 222 +++N + +NT ++ +R + +T V + + +M D S DN W Sbjct: 47460 IYINKWSLMINTLVKSLFQRPFHQLQTELGVVTNKMPSMSSVKDPSKRLGQIVSRVDNSW 47639 Query: 223 VVSPRQASTPWPVI 236 + ASTP P++ Sbjct: 47640 YMKYFNASTPLPIL 47681 >scaffold_55 Length = 359325 Score = 30.0 bits (66), Expect = 7.5 Identities = 16/35 (45%), Positives = 19/35 (54%) Frame = +2 Query: 258 ERLHSPEVMGELEKQSASFFEAEVKRRERERCDHD 292 E L E GEL KQ + FEAE+K E E D + Sbjct: 23678 EELTEEEAQGELMKQRLADFEAELKAVEDEEFDEE 23782 >scaffold_45 Length = 464023 Score = 30.0 bits (66), Expect = 7.5 Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 2/45 (4%) Frame = -2 Query: 168 VEIRLNTPIEICLERNERRTETPQYVPPHVIKNMGGSF--DVGVD 210 +EIR+N IC ERN+ R+ PQ V + ++G +F VG+D Sbjct: 395436 LEIRVNNRALICPERNQARSPNPQ*VVVYTGWSVGCTFVRVVGID 395302 >scaffold_22 Length = 950298 Score = 30.0 bits (66), Expect = 7.5 Identities = 16/35 (45%), Positives = 19/35 (54%) Frame = +3 Query: 258 ERLHSPEVMGELEKQSASFFEAEVKRRERERCDHD 292 E L E GEL KQ + FEAE+K E E D + Sbjct: 476628 EELTEEEAQGELMKQRLADFEAELKAVEDEEFDEE 476732 Database: F.cylindrus/genome.fa Posted date: Nov 21, 2011 7:46 PM Number of letters in database: 80,540,407 Number of sequences in database: 271 Lambda K H 0.319 0.133 0.400 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 33,593,803 Number of Sequences: 271 Number of extensions: 474253 Number of successful extensions: 2147 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 19 Number of HSP's that attempted gapping in prelim test: 1938 Number of HSP's gapped (non-prelim): 586 length of query: 386 length of database: 26,846,802 effective HSP length: 109 effective length of query: 277 effective length of database: 26,817,263 effective search space: 7428381851 effective search space used: 7428381851 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 65 (29.6 bits)