TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|70879148|gb|EAN92345.1| hypothetical protein, conserved
[Trypanosoma cruzi]
         (386 letters)

Database: D.fasciculatum/genome.fa 
           25 sequences; 31,019,208 total letters

Searching.........................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|328871378|gb|GL883013.1| Dictyostelium fasciculatum unplaced ...    30   3.9  

>gi|328871378|gb|GL883013.1| Dictyostelium fasciculatum unplaced genomic
               scaffold Scf_ET2XIPL01CNAVH-3, whole genome shotgun sequence
          Length = 1908399

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -1

Query: 163     VFVNMVEIRLNTPIEICLERNERRTETPQYVPPHVIKNMGGSFD 206
               +FVNMV I L  P + C +  +   E      PH ++ +   FD
Sbjct: 1142721 IFVNMVSILLTNPADFCQQNQQISAEFKLVHHPHRLQLLDHPFD 1142590


  Database: D.fasciculatum/genome.fa
    Posted date:  Nov 21, 2011  7:46 PM
  Number of letters in database: 31,019,208
  Number of sequences in database:  25
  
Lambda     K      H
   0.319    0.133    0.400 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,236,800
Number of Sequences: 25
Number of extensions: 168329
Number of successful extensions: 767
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 760
Number of HSP's gapped (non-prelim): 33
length of query: 386
length of database: 10,339,736
effective HSP length: 102
effective length of query: 284
effective length of database: 10,337,186
effective search space: 2935760824
effective search space used: 2935760824
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)