TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|8923460|ref|NP_060316.1| tRNA selenocysteine 1-associated
protein 1 [Homo sapiens]
         (287 letters)

Database: genome.fa 
           32,746 sequences; 89,612,356 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAHK01000012.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    63   5e-10
gb|AAHK01000010.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    53   7e-07
gb|AAHK01000380.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    47   4e-05
gb|AAHK01000219.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    43   7e-04
gb|AAHK01000354.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    42   0.002
gb|AAHK01026024.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    40   0.005
gb|AAHK01019503.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    40   0.005
gb|AAHK01008320.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    40   0.005
gb|AAHK01001027.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    40   0.005
gb|AAHK01001774.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    39   0.010
gb|AAHK01001204.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    39   0.010
gb|AAHK01000001.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    39   0.010
gb|AAHK01002059.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    39   0.014
gb|AAHK01000017.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    39   0.014
gb|AAHK01000057.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    38   0.018
gb|AAHK01000045.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    37   0.040
gb|AAHK01026952.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    36   0.068
gb|AAHK01013649.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    35   0.12 
gb|AAHK01000747.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    35   0.12 
gb|AAHK01027436.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    35   0.15 
gb|AAHK01000204.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    33   0.44 
gb|AAHK01026014.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    33   0.75 
gb|AAHK01001058.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    33   0.75 
gb|AAHK01000896.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    33   0.75 
gb|AAHK01000512.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    33   0.75 
gb|AAHK01000078.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    32   0.98 
gb|AAHK01000762.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    32   1.3  
gb|AAHK01000376.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    32   1.7  
gb|AAHK01000600.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    31   2.2  
gb|AAHK01024583.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    30   4.9  
gb|AAHK01005193.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    30   4.9  
gb|AAHK01002742.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    30   4.9  

>gb|AAHK01000012.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053506885, whole genome
             shotgun sequence
          Length = 133599

 Score = 63.2 bits (152), Expect = 5e-10
 Identities = 49/161 (30%), Positives = 81/161 (50%), Gaps = 4/161 (2%)
 Frame = -3

Query: 3     ASLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCL 62
             ASL++GDL+P + E  +   F   G T+++V++ R+ +T    GY +V F    +A K +
Sbjct: 15691 ASLYVGDLDPVVTEPHLVELFKPFG-TILNVRVCRDIITQRSLGYGYVNFNSHDSAAKAM 15515

Query: 63    HKINGKPLPGATPAKRFKLNYATYGKQPDNSPEYS----LFVGDLTPDVDDGMLYEFFVK 118
               +N K +      K  ++ +    +Q D +  YS    +FV +L  +VD   L   F K
Sbjct: 15514 EALNFKRVGD----KCMRIMW----QQRDPTLRYSGNGNIFVKNLKNEVDSRELSVIFKK 15359

Query: 119   VYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQG 159
              +      KV+ D+ G S+GYGFV F ++   K A+    G
Sbjct: 15358 -FGDILSCKVMEDEEGKSRGYGFVHFKNDNAAKEAIENMNG 15239


>gb|AAHK01000010.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053508461, whole genome
             shotgun sequence
          Length = 135130

 Score = 52.8 bits (125), Expect = 7e-07
 Identities = 43/158 (27%), Positives = 70/158 (44%)
 Frame = -3

Query: 4     SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
             S+W+G L+P ++E  +   F  +G  V SV++  + +T    GY +V F + A AEK L 
Sbjct: 39161 SIWVGGLDPNLNEQKLYDHFVRLG-PVASVRVCVDSVTQKSLGYGYVNFQNPADAEKALD 38985

Query: 64    KINGKPLPGATPAKRFKLNYATYGKQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSC 123
             +   K       +K  ++           S   ++ V  L P VD   L E F K Y   
Sbjct: 38984 QAGVK-----LGSKHIRIAKIQRDPSKRRSGVTNIVVKKLPPSVDTYALKEMFSK-YGRL 38823

Query: 124   RGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAV 161
                 +  ++ G S+GY  + +  E    +A+ E  G V
Sbjct: 38822 TAIGLATNENGESRGYARISYEKEESAIQAVQEVNGMV 38709



 Score = 47.4 bits (111), Expect = 3e-05
 Identities = 30/82 (36%), Positives = 47/82 (57%)
 Frame = -3

Query: 90    PDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELE 149
             P  SP  S++VG L P++++  LY+ FV++ P       V   T  S GYG+V F +  +
Sbjct: 39176 PAASP--SIWVGGLDPNLNEQKLYDHFVRLGPVASVRVCVDSVTQKSLGYGYVNFQNPAD 39003

Query: 150   QKRALTECQGAVGLGSKPVRLS 171
              ++AL   Q  V LGSK +R++
Sbjct: 39002 AEKALD--QAGVKLGSKHIRIA 38943


>gb|AAHK01000380.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053509999, whole genome
             shotgun sequence
          Length = 38494

 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 53/193 (27%), Positives = 84/193 (43%), Gaps = 16/193 (8%)
 Frame = +3

Query: 3     ASLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCL 62
             A+L++  L   +DEN +   F+  G+ ++S  ++RN  TG   G  FV +A    A   L
Sbjct: 36144 ANLFIRHLPRVVDENELRIFFSPYGQ-ILSAAVMRNIHTGENLGTAFVRYATNEQARTAL 36320

Query: 63    HKINGKPLPGATPAKRFKLNYATYGKQPDNSP-------EYSLFVGDLTPDVDDGMLYEF 115
             H+ NG+ L G    +   +++A   K+ DN+P        + LFV ++  DV    L   
Sbjct: 36321 HECNGRFLHG----RAISVHWAK--KRHDNTPIGDARKKIFKLFVRNIPLDVSADELARL 36482

Query: 116   FVKVYP----SCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGA---VGLGSKP- 167
             F    P    S      V     + +  GFV F  E   ++A           G GS P 
Sbjct: 36483 FACFGPVGSVSLHKDTAVPRNKWMERRIGFVAFLAEGAAEKAAEAVHNTRPFPGSGSIPL 36662

Query: 168   -VRLSVAIPKASR 179
              V+L+  +P  +R
Sbjct: 36663 MVKLAEDVPARNR 36701


>gb|AAHK01000219.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053510657, whole genome
             shotgun sequence
          Length = 50317

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
 Frame = +3

Query: 49    FVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYGKQPDNSPEYSLFVGDLTPDVD 108
             +V F D  +  K L ++NG  + G     R  +      K  + +PE S+F+G++  D +
Sbjct: 35952 YVLFKDEGSVTKAL-EMNGVVVDG-----RHIVVTTMDAKSREYAPETSVFIGNIAYDTN 36113

Query: 109   DGMLYEFFV-KVYPSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRAL 154
             + M++ FF+ K     R  ++V D+ TG  KG+G+V+F       RA+
Sbjct: 36114 EEMVWNFFLEKGVTDVRRVRLVRDRDTGSCKGFGYVEFRSPASVSRAI 36257


>gb|AAHK01000354.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053510747, whole genome
             shotgun sequence
          Length = 39836

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 31/108 (28%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
 Frame = -2

Query: 49    FVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYGKQPDNSPEYSLFVGDLTPDVD 108
             +V F D  +  K L ++NG  + G     R  +      +  + +PE S+F+G++  D +
Sbjct: 18730 YVLFKDEGSVTKAL-EMNGVVVDG-----RHIVVTTMDAESREYAPETSVFIGNIAYDTN 18569

Query: 109   DGMLYEFFV-KVYPSCRGGKVVLD-QTGVSKGYGFVKFTDELEQKRAL 154
             + M++ FF+ K     R  ++V D +TG  KG+G+V+F       RA+
Sbjct: 18568 EEMVWNFFLEKGVTDVRRVRLVRDRETGSCKGFGYVEFRSPASVSRAI 18425


>gb|AAHK01026024.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053426865, whole
           genome shotgun sequence
          Length = 820

 Score = 40.0 bits (92), Expect = 0.005
 Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
 Frame = -3

Query: 97  SLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLD-QTGVSKGYGFVKFTDELEQKRA 153
           +LFV  L  +++D  L + F +  P     KV+LD  TG SKG+GFV F  E E KRA
Sbjct: 521 NLFVAKLPRNLNDSDLEQIFAEYRPV--SAKVMLDASTGRSKGFGFVLFRTEEEGKRA 354


>gb|AAHK01019503.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053473909, whole
           genome shotgun sequence
          Length = 922

 Score = 40.0 bits (92), Expect = 0.005
 Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
 Frame = -3

Query: 97  SLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLD-QTGVSKGYGFVKFTDELEQKRA 153
           +LFV  L  +++D  L + F +  P     KV+LD  TG SKG+GFV F  E E KRA
Sbjct: 854 NLFVAKLPRNLNDSDLEQIFAEYRPV--SAKVMLDASTGRSKGFGFVLFRTEEEGKRA 687


>gb|AAHK01008320.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053456657, whole
           genome shotgun sequence
          Length = 1246

 Score = 40.0 bits (92), Expect = 0.005
 Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
 Frame = -1

Query: 97  SLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLD-QTGVSKGYGFVKFTDELEQKRA 153
           +LFV  L  +++D  L + F +  P     KV+LD  TG SKG+GFV F  E E KRA
Sbjct: 289 NLFVAKLPRNLNDSDLEQIFAEYRPV--SAKVMLDASTGRSKGFGFVLFRTEEEGKRA 122


>gb|AAHK01001027.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053507025, whole genome
            shotgun sequence
          Length = 18803

 Score = 40.0 bits (92), Expect = 0.005
 Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
 Frame = -2

Query: 97   SLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLD-QTGVSKGYGFVKFTDELEQKRA 153
            +LFV  L  +++D  L + F +  P     KV+LD  TG SKG+GFV F  E E KRA
Sbjct: 9325 NLFVAKLPRNLNDSDLEQIFAEYRPV--SAKVMLDASTGRSKGFGFVLFRTEEEGKRA 9158



 Score = 32.0 bits (71), Expect = 1.3
 Identities = 18/28 (64%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = -1

Query: 127   KVVLD-QTGVSKGYGFVKFTDELEQKRA 153
             KV+LD  TG SKG+GFV F  E E KRA
Sbjct: 18779 KVMLDASTGRSKGFGFVLFRTEEEGKRA 18696


>gb|AAHK01001774.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053506693, whole genome
            shotgun sequence
          Length = 9478

 Score = 38.9 bits (89), Expect = 0.010
 Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
 Frame = -3

Query: 90   PDNSPEY--SLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLD-QTGVSKGYGFVKFTD 146
            P N   Y   L V  L PDV    L+  F +  P   G +++ D QT + KGYGFV F +
Sbjct: 6011 PSNDERYRKQLIVNYLAPDVVSAELHGLFSRFGP-LDGARIIHDRQTNLPKGYGFVYFCN 5835

Query: 147  ELEQKRALTECQG 159
              + K A+    G
Sbjct: 5834 PEDAKEAVERMNG 5796


>gb|AAHK01001204.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053511481, whole genome
             shotgun sequence
          Length = 15581

 Score = 38.9 bits (89), Expect = 0.010
 Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 2/104 (1%)
 Frame = +1

Query: 77    KRFKLNYATYGKQPDNSPEY--SLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQTG 134
             KR K         P    E+  +++V  L  D DD  L++ F +  P      +    T 
Sbjct: 12061 KRKKKGEKMGSPSPTERSEFGRNVYVASLPLDFDDQQLFDLFAQYGPISSARIMRKKGTR 12240

Query: 135   VSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKAS 178
              SKGYGF+ + +      A++   G + +G   +++ +A P AS
Sbjct: 12241 ESKGYGFILYKNVASAALAISSLSGGI-IGGSRIQVRLAHPDAS 12369


>gb|AAHK01000001.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053508153, whole genome
              shotgun sequence
          Length = 256157

 Score = 38.9 bits (89), Expect = 0.010
 Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
 Frame = +2

Query: 90     PDNSPEY--SLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLD-QTGVSKGYGFVKFTD 146
              P N   Y   L V  L PDV    L+  F +  P   G +++ D QT + KGYGFV F +
Sbjct: 133052 PSNDERYRKQLIVNYLAPDVVSAELHGLFSRFGP-LDGARIIHDRQTNLPKGYGFVYFCN 133228

Query: 147    ELEQKRALTECQG 159
                + K A+    G
Sbjct: 133229 PEDAKEAVERMNG 133267


>gb|AAHK01002059.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053469785, whole genome
            shotgun sequence
          Length = 7623

 Score = 38.5 bits (88), Expect = 0.014
 Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
 Frame = -2

Query: 97   SLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLD-QTGVSKGYGFVKFTDELEQKR 152
            +LFV  L  +++D  L + F +  P     KV+LD  TG SKG+GFV F  E E KR
Sbjct: 6944 NLFVAKLPRNLNDSDLEQIFAEYRPV--SAKVMLDASTGRSKGFGFVLFRTEEEGKR 6780


>gb|AAHK01000017.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053511127, whole
           genome shotgun sequence
          Length = 114992

 Score = 38.5 bits (88), Expect = 0.014
 Identities = 22/82 (26%), Positives = 40/82 (48%)
 Frame = +2

Query: 97  SLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTE 156
           +++V  L  D DD  L++ F +  P      +    T  SKGYGF+ + +      A++ 
Sbjct: 794 NVYVASLPLDFDDQQLFDLFAQYGPISSARIMRKKGTRESKGYGFILYKNVASAALAISS 973

Query: 157 CQGAVGLGSKPVRLSVAIPKAS 178
             G + +G   +++ +A P AS
Sbjct: 974 LSGGI-IGGSRIQVRLAHPDAS 1036


>gb|AAHK01000057.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053509965, whole genome
             shotgun sequence
          Length = 85381

 Score = 38.1 bits (87), Expect = 0.018
 Identities = 40/181 (22%), Positives = 71/181 (39%), Gaps = 14/181 (7%)
 Frame = -2

Query: 5     LWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHK 64
             LW+GDL P +    ++  F   G+ + ++  + +R         F+ F  +    + L  
Sbjct: 35466 LWLGDLPPTVSNEELNENFKVFGK-IKTISRLDSR------NMAFIHFETIEDCTQALDL 35308

Query: 65    INGKPLPGATPAKRFKLNYATYGKQP--------------DNSPEYSLFVGDLTPDVDDG 110
             +  +P+ GA    R  LNY    + P              + +P   +++G L  DV +G
Sbjct: 35307 MRDQPIGGA----RVVLNYGRAQRNPTSTETGLTPDGIPVNETPTNVVYLGQLASDVTEG 35140

Query: 111   MLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRL 170
              + + F + +      K +      S G  F  F D +E  RA         L   P+R+
Sbjct: 35139 DVEDLF-EPFEGFINSKFI-----QSSGIAFGHF-DSIEHARAARIALNNALLRGAPLRI 34981

Query: 171   S 171
             S
Sbjct: 34980 S 34978


>gb|AAHK01000045.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053507093, whole genome
             shotgun sequence
          Length = 89693

 Score = 37.0 bits (84), Expect = 0.040
 Identities = 26/75 (34%), Positives = 37/75 (49%)
 Frame = -2

Query: 10    LEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKP 69
             L P MDE  +   F   G  + SVKII ++ T    GY FV++    +A    + +NG  
Sbjct: 69325 LPPMMDETQLYGLFGQFGP-IESVKIIYDKETRESRGYGFVKYVHYFSASYAANSLNGYC 69149

Query: 70    LPGATPAKRFKLNYA 84
             + G    KR K+ YA
Sbjct: 69148 IAG----KRLKVAYA 69116



 Score = 35.0 bits (79), Expect = 0.15
 Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
 Frame = -1

Query: 97    SLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLD-QTGVSKGYGFVKFTDELEQKRALT 155
             +L V  +   VD+  L + F + Y      K+V D +T  S+GYGFVKF      ++A+ 
Sbjct: 60329 NLMVNYIPTTVDEVQLRQLFER-YGPIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIA 60153

Query: 156   ECQGAVGLGSKPVRLSVAIPKASRVKP 182
                G  G      RL VA+  +   +P
Sbjct: 60152 ---GLNGFNILNKRLKVALAASGHQRP 60081



 Score = 34.7 bits (78), Expect = 0.20
 Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 1/117 (0%)
 Frame = -1

Query: 59    EKCLHKINGKPLPGATPAKRFKLNYATYGKQPDNSPEYSLFVGDLTPDVDDGMLYEFFVK 118
             EK L  I  + +    P ++ +   A    +PD     +L V  +   VD+  L + F +
Sbjct: 65600 EKILSFIMSQQMQYYAPQQQLQQAPAQMNPEPDLLR--NLMVNYIPTTVDEVQLRQLFER 65427

Query: 119   VYPSCRGGKVVLD-QTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAI 174
              Y      K+V D +T  S+GYGFVKF      ++A+    G  G      RL VA+
Sbjct: 65426 -YGPIESVKIVADRETRQSRGYGFVKFQSGSSAQQAIA---GLNGFNILNKRLKVAL 65268



 Score = 32.7 bits (73), Expect = 0.75
 Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
 Frame = -2

Query: 97    SLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLD-QTGVSKGYGFVKFTDELEQKRALT 155
             +L V  L P +D+  LY  F +  P     K++ D +T  S+GYGFVK+        A  
Sbjct: 69343 NLIVNYLPPMMDETQLYGLFGQFGP-IESVKIIYDKETRESRGYGFVKYVHYFSASYAAN 69167

Query: 156   ECQGAVGLGSKPVRLSVA 173
                G    G    RL VA
Sbjct: 69166 SLNGYCIAGK---RLKVA 69122



 Score = 32.0 bits (71), Expect = 1.3
 Identities = 24/76 (31%), Positives = 39/76 (51%)
 Frame = -1

Query: 14    MDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGA 73
             +DE  + + F   G  + SVKI+ +R T    GY FV+F   ++A++ +  +NG  +   
Sbjct: 65462 VDEVQLRQLFERYGP-IESVKIVADRETRQSRGYGFVKFQSGSSAQQAIAGLNGFNILN- 65289

Query: 74    TPAKRFKLNYATYGKQ 89
                KR K+  A  G Q
Sbjct: 65288 ---KRLKVALAASGHQ 65250



 Score = 31.2 bits (69), Expect = 2.2
 Identities = 24/76 (31%), Positives = 39/76 (51%)
 Frame = -1

Query: 14    MDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGA 73
             +DE  + + F   G  + SVKI+ +R T    GY FV+F   ++A++ +  +NG  +   
Sbjct: 60299 VDEVQLRQLFERYGP-IESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIAGLNGFNILN- 60126

Query: 74    TPAKRFKLNYATYGKQ 89
                KR K+  A  G Q
Sbjct: 60125 ---KRLKVALAASGHQ 60087


>gb|AAHK01026952.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053423459, whole
           genome shotgun sequence
          Length = 795

 Score = 36.2 bits (82), Expect = 0.068
 Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
 Frame = +1

Query: 97  SLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLD-QTGVSKGYGFVKFTDELEQKRA 153
           +LF   L  +++D  L + F +  P     KV+LD  TG SKG+GFV F  E + KRA
Sbjct: 589 NLFGAKLPRNLNDSDLEQIFAEYRPV--SAKVMLDASTGRSKGFGFVLFRTEKKGKRA 756


>gb|AAHK01013649.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053420841, whole
           genome shotgun sequence
          Length = 1012

 Score = 35.4 bits (80), Expect = 0.12
 Identities = 21/63 (33%), Positives = 34/63 (53%)
 Frame = +3

Query: 97  SLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTE 156
           ++FV +L  +VD   L   F K +      KV+ D+ G S+GYGFV F ++   + A+ +
Sbjct: 72  NIFVKNLKNEVDSRELSVIFRK-FGDILSCKVMEDEEGKSRGYGFVHFKNDNAAREAIEK 248

Query: 157 CQG 159
             G
Sbjct: 249 MNG 257


>gb|AAHK01000747.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053506795, whole genome
            shotgun sequence
          Length = 24682

 Score = 35.4 bits (80), Expect = 0.12
 Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
 Frame = -3

Query: 87   GKQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQT--GVSKGYGFVKF 144
            G  P      +L V  +   V D  L E F K + +    +V+ D+   G  KGYGFV +
Sbjct: 3635 GTMPSGGDPRNLIVNYIPTPVSDESLREMFEK-FGTLVSARVIRDKKRDGHPKGYGFVVY 3459

Query: 145  TDELEQKRALTECQGAVGLGSKPVRLSVA 173
             D     RA+ E  G   + +K +R+S A
Sbjct: 3458 ADRESGLRAMEEMNG-FKIHNKHLRVSPA 3375



 Score = 31.2 bits (69), Expect = 2.2
 Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
 Frame = -3

Query: 12   PYMDENFISRAFATMGETVMSVKIIRNRLT-GIPAGYCFVEFADLATAEKCLHKING 67
            P  DE+ +   F   G T++S ++IR++   G P GY FV +AD  +  + + ++NG
Sbjct: 3578 PVSDES-LREMFEKFG-TLVSARVIRDKKRDGHPKGYGFVVYADRESGLRAMEEMNG 3414


>gb|AAHK01027436.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053427987, whole
           genome shotgun sequence
          Length = 778

 Score = 35.0 bits (79), Expect = 0.15
 Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
 Frame = -2

Query: 97  SLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLD-QTGVSKGYGFVKFTDELEQKRALT 155
           +L V  +   VD+  L + F + Y      K+V D +T  S+GYGFVKF      ++A+ 
Sbjct: 648 NLMVNYIPTTVDEVQLRQLFER-YGPIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIA 472

Query: 156 ECQGAVGLGSKPVRLSVAIPKASRVKP 182
              G  G      RL VA+  +   +P
Sbjct: 471 ---GLNGFNILNKRLKVALAASGHQRP 400



 Score = 31.2 bits (69), Expect = 2.2
 Identities = 24/76 (31%), Positives = 39/76 (51%)
 Frame = -2

Query: 14  MDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGA 73
           +DE  + + F   G  + SVKI+ +R T    GY FV+F   ++A++ +  +NG  +   
Sbjct: 618 VDEVQLRQLFERYGP-IESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIAGLNGFNILN- 445

Query: 74  TPAKRFKLNYATYGKQ 89
              KR K+  A  G Q
Sbjct: 444 ---KRLKVALAASGHQ 406


>gb|AAHK01000204.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053509937, whole genome
             shotgun sequence
          Length = 51329

 Score = 33.5 bits (75), Expect = 0.44
 Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
 Frame = +1

Query: 90    PDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQT--GVSKGYGFVKFTDE 147
             P      +L V  +   V D  L E F K + +    +V+ D+   G  KGYGFV + D 
Sbjct: 12412 PSGGDPRNLIVNYIPTPVSDESLREMFEK-FGTLVSARVIRDKKRDGHPKGYGFVVYADR 12588

Query: 148   LEQKRALTECQGAVGLGSKPVRLSVA 173
                 RA+ E  G   + +K +R+S A
Sbjct: 12589 ESGLRAMEEMNG-FKIHNKHLRVSPA 12663



 Score = 31.2 bits (69), Expect = 2.2
 Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
 Frame = +1

Query: 12    PYMDENFISRAFATMGETVMSVKIIRNRLT-GIPAGYCFVEFADLATAEKCLHKING 67
             P  DE+ +   F   G T++S ++IR++   G P GY FV +AD  +  + + ++NG
Sbjct: 12460 PVSDES-LREMFEKFG-TLVSARVIRDKKRDGHPKGYGFVVYADRESGLRAMEEMNG 12624


>gb|AAHK01026014.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053456907, whole
           genome shotgun sequence
          Length = 820

 Score = 32.7 bits (73), Expect = 0.75
 Identities = 21/69 (30%), Positives = 33/69 (47%)
 Frame = -3

Query: 2   AASLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKC 61
           + ++++G+L  Y  E  I   FA+ G  V  V +  N  T  P G+CFV F     A   
Sbjct: 683 STTVYVGNLSFYTTEGQIWEHFASCGH-VRDVVMGLNEATRTPCGFCFVVFEQQCAAMCA 507

Query: 62  LHKINGKPL 70
           +  ++G  L
Sbjct: 506 VSDMHGSLL 480


>gb|AAHK01001058.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053509591, whole genome
             shotgun sequence
          Length = 18120

 Score = 32.7 bits (73), Expect = 0.75
 Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
 Frame = +3

Query: 98    LFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVL-DQTGVSKGYGFVKFTDELEQKRALTE 156
             LFV  L+  V    + EF  K++P     +++    +G  KG+ +V F+DE      L  
Sbjct: 10950 LFVSRLSKSVPAKEVEEFLAKLFPEAVHIQLLQGSHSGTHKGHAYVHFSDEATAADVLRR 11129

Query: 157   CQGAVGLGSKPV--RLSVAIPKASRV 180
                 +G G  P    LS+ + +ASR+
Sbjct: 11130 ----LGEGPTPTFHELSIHVKRASRL 11195



 Score = 30.0 bits (66), Expect = 4.9
 Identities = 15/71 (21%), Positives = 32/71 (45%)
 Frame = +3

Query: 1     MAASLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEK 60
             M   L++  L   +    +    A +    + +++++   +G   G+ +V F+D ATA  
Sbjct: 10938 MTVRLFVSRLSKSVPAKEVEEFLAKLFPEAVHIQLLQGSHSGTHKGHAYVHFSDEATAAD 11117

Query: 61    CLHKINGKPLP 71
              L ++   P P
Sbjct: 11118 VLRRLGEGPTP 11150


>gb|AAHK01000896.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053504071, whole genome
             shotgun sequence
          Length = 21107

 Score = 32.7 bits (73), Expect = 0.75
 Identities = 21/69 (30%), Positives = 33/69 (47%)
 Frame = +1

Query: 2     AASLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKC 61
             + ++++G+L  Y  E  I   FA+ G  V  V +  N  T  P G+CFV F     A   
Sbjct: 14563 STTVYVGNLSFYTTEGQIWEHFASCGH-VRDVVMGLNEATRTPCGFCFVVFEQQCAAMCA 14739

Query: 62    LHKINGKPL 70
             +  ++G  L
Sbjct: 14740 VSDMHGSLL 14766


>gb|AAHK01000512.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053503999, whole genome
             shotgun sequence
          Length = 32148

 Score = 32.7 bits (73), Expect = 0.75
 Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
 Frame = +3

Query: 98    LFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVL-DQTGVSKGYGFVKFTDELEQKRALTE 156
             LFV  L+  V    + EF  K++P     +++    +G  KG+ +V F+DE      L  
Sbjct: 24126 LFVSRLSKSVPAKEVEEFLAKLFPEAVHIQLLQGSHSGTHKGHAYVHFSDEATAADVLRR 24305

Query: 157   CQGAVGLGSKPV--RLSVAIPKASRV 180
                 +G G  P    LS+ + +ASR+
Sbjct: 24306 ----LGEGPTPTFHELSIHVKRASRL 24371



 Score = 30.0 bits (66), Expect = 4.9
 Identities = 15/71 (21%), Positives = 32/71 (45%)
 Frame = +3

Query: 1     MAASLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEK 60
             M   L++  L   +    +    A +    + +++++   +G   G+ +V F+D ATA  
Sbjct: 24114 MTVRLFVSRLSKSVPAKEVEEFLAKLFPEAVHIQLLQGSHSGTHKGHAYVHFSDEATAAD 24293

Query: 61    CLHKINGKPLP 71
              L ++   P P
Sbjct: 24294 VLRRLGEGPTP 24326


>gb|AAHK01000078.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053506825, whole genome
            shotgun sequence
          Length = 74869

 Score = 32.3 bits (72), Expect = 0.98
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = -2

Query: 30   VMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGAT 74
            V+  K++R+  T +P G+ FV F     A  C+  +NG    G T
Sbjct: 2526 VLRAKVVRDATTSLPCGHGFVLFETEEQASACVATLNGFVAEGRT 2392


>gb|AAHK01000762.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053506681, whole genome
            shotgun sequence
          Length = 24348

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = -2

Query: 30   VMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGAT 74
            V+  K++R+  T +P G+ FV F     A  C+  +NG    G T
Sbjct: 2888 VLRAKVVRDATTSLPCGHGFVLFETEEQAAACVATLNGFVAEGRT 2754


>gb|AAHK01000376.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053503897, whole genome
             shotgun sequence
          Length = 38879

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 19/41 (46%), Positives = 26/41 (63%)
 Frame = +2

Query: 133   TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVA 173
             T  SKG  FVKF    +  RAL+ C+GAV +G + +R+S A
Sbjct: 21962 TRQSKGAAFVKFVRVEDAMRALSLCRGAVFMG-RLLRVSAA 22081


>gb|AAHK01000600.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053509561, whole genome
             shotgun sequence
          Length = 28974

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 19/41 (46%), Positives = 26/41 (63%)
 Frame = -3

Query: 133   TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVA 173
             T  SKG  FVKF    +  RAL+ C+GAV +G + +R+S A
Sbjct: 22855 TRQSKGAAFVKFVRVEDAVRALSLCRGAVFMG-RLLRVSAA 22736


>gb|AAHK01024583.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053417763, whole
           genome shotgun sequence
          Length = 848

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
 Frame = -2

Query: 10  LEPYMDENFISRAFATMGET-VMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGK 68
           L  ++ ++     F   GE      KII +R      GY FV + D  + E  +  ING 
Sbjct: 433 LPQFLTDDGFRELFTPFGEIHTKPTKIIYDRGARRGKGYGFVYYKDGRSTEAAIKTINGL 254

Query: 69  PLPGATPAKRFKLNYA 84
            L G    +R K+ YA
Sbjct: 253 SLGG----RRLKVRYA 218


>gb|AAHK01005193.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053404223, whole genome
            shotgun sequence
          Length = 1674

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
 Frame = -2

Query: 10   LEPYMDENFISRAFATMGET-VMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGK 68
            L  ++ ++     F   GE      KII +R      GY FV + D  + E  +  ING 
Sbjct: 1310 LPQFLTDDGFRELFTPFGEIHTKPTKIIYDRGARRGKGYGFVYYKDGRSTEAAIKTINGL 1131

Query: 69   PLPGATPAKRFKLNYA 84
             L G    +R K+ YA
Sbjct: 1130 SLGG----RRLKVRYA 1095


>gb|AAHK01002742.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053508901, whole genome
            shotgun sequence
          Length = 4822

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
 Frame = +3

Query: 10   LEPYMDENFISRAFATMGET-VMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGK 68
            L  ++ ++     F   GE      KII +R      GY FV + D  + E  +  ING 
Sbjct: 3675 LPQFLTDDGFRELFTPFGEIHTKPTKIIYDRGARRGKGYGFVYYKDGRSTEAAIKTINGL 3854

Query: 69   PLPGATPAKRFKLNYA 84
             L G    +R K+ YA
Sbjct: 3855 SLGG----RRLKVRYA 3890


  Database: genome.fa
    Posted date:  Jan 19, 2010  5:13 PM
  Number of letters in database: 89,612,356
  Number of sequences in database:  32,746
  
Lambda     K      H
   0.317    0.135    0.406 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,287,684
Number of Sequences: 32746
Number of extensions: 351660
Number of successful extensions: 1089
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1086
length of query: 287
length of database: 29,870,785
effective HSP length: 105
effective length of query: 182
effective length of database: 26,432,455
effective search space: 4810706810
effective search space used: 4810706810
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)