TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SPP00000038_1.0 # Protein # Eukaryotic elongation factor (eEFSec) # Homo sapiens # Complete (596 letters) Database: genome.fa 697 sequences; 71,881,135 total letters Searching.....................................................done Score E Sequences producing significant alignments: (bits) Value scaffold_147 276 3e-78 scaffold_128 207 1e-57 scaffold_93 92 3e-18 scaffold_118 91 7e-18 scaffold_115 72 3e-12 scaffold_113 51 4e-10 scaffold_599 64 1e-09 scaffold_90 59 3e-08 scaffold_22 44 8e-04 scaffold_29 44 0.001 scaffold_41 44 0.001 scaffold_77 41 0.005 scaffold_130 39 0.019 scaffold_140 39 0.019 scaffold_151 36 0.16 scaffold_134 35 0.36 scaffold_84 34 0.62 scaffold_157 34 0.81 scaffold_161 32 2.4 scaffold_267 32 2.4 scaffold_664 32 2.4 scaffold_171 32 2.4 scaffold_60 32 2.4 scaffold_52 32 3.1 scaffold_27 32 3.1 scaffold_9 32 3.1 scaffold_82 31 5.3 >scaffold_147 Length = 242120 Score = 276 bits (706), Expect(2) = 3e-78 Identities = 186/458 (40%), Positives = 254/458 (55%), Gaps = 9/458 (1%) Frame = -3 Query: 87 QVTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLN 146 Q TLVDCPGHASLI+TIIGGA IID+M LVIDVTKG+ T +AECLVIG+I KL+VVLN Sbjct: 30852 QFTLVDCPGHASLIKTIIGGA*IIDMMFLVIDVTKGI*T*TAECLVIGEILADKLIVVLN 30673 Query: 147 KIDLLPEGKRQAAIDKMTKKMQKTLENTKFRG-APIIPVXXXXXXXXXXXXXXXXXIPEL 205 KIDL E I+K K + L TKF ++PV I +L Sbjct: 30672 KIDLATE----EVINKQKKIISNVLSKTKFGN*VSLVPVSAV*AIG----------IEDL 30535 Query: 206 IELLTSQISIPTRDP--SGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALKV 263 + +L I+IP R + L +DHCF IKG GTV TGTI+ GS+ D V P L + Sbjct: 30534 LGILLHNITIPNR*A*LNKGLLFMIDHCF*IKG*GTVTTGTII*GSMKPNDEVFFPMLNL 30355 Query: 264 VKKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERGLVCAPESLHTVHAALISVEKIP 323 KK+KS+ MF P+ GDR+ T D K +ERG+VC P + + +I +KI Sbjct: 30354 NKKIKSL*MFKKPVQIGEPGDRIAALFTNLDAKEIERGIVC*PGIVSLLENIVIDFKKIS 30175 Query: 324 YFRGPLQTKAKFHITVGHETVMGRLMFFSPAPDNFDQEPILDSFNFSQEYLFQEQYLSKD 383 Y++G L++ KFHIT GH TVMG L P N E N EYL E Y Sbjct: 30174 YYKG*LKS*NKFHITSGHLTVMG*LKLII-RPKNL*LE-----INSEGEYL--EDYEGMY 30019 Query: 384 LTPAVTDNDEADKKAGQATEGHCPRQQWALVEFEKPVTCPRLCLVIGSRLDADIHTNTCR 443 ++ D + +K + +++ EKP+ LVIGS+LD D+ N CR Sbjct: 30018 *LLSLLDYIKLQEK----------YNLYGVLQLEKPLIASMNSLVIGSKLDTDLEANICR 29869 Query: 444 LAFHGILLHG-----LEDRNYADSFLPRLKVYKLKHKHGLVERAMDDYSVIGRSLFKKET 498 +AF+G +L + N+ L+V++ K K+G VE+ +D+Y+++ + LFKKET Sbjct: 29868 IAFYGNILFSYTA**IFQ*NF-------LRVFRKKTKNGKVEKVIDNYTLLIKDLFKKET 29710 Query: 499 NIQLFVGLKVHLSTGEL-GIIDSAFGQSGKFKIHIPGG 535 NI ++G + + G + G IDSAFG+SGK K+ + G Sbjct: 29709 NIANYIGKLIVIK*GNIQGKIDSAFGKSGKVKVFVESG 29596 Score = 37.0 bits (84), Expect(2) = 3e-78 Identities = 24/52 (46%), Positives = 24/52 (46%), Gaps = 8/52 (15%) Frame = -1 Query: 13 LGHIDSGKXXXXXXXXXXXXXXXF--------DKQPQSRERGITLDLGFSCF 56 LGHIDSGK DK P S ERGITLDLGFS F Sbjct: 31067 LGHIDSGKTSLVKTLSKVINISTI*ITSTASLDKNP*S*ERGITLDLGFSAF 30912 >scaffold_128 Length = 268562 Score = 207 bits (526), Expect(2) = 1e-57 Identities = 124/263 (47%), Positives = 158/263 (60%), Gaps = 3/263 (1%) Frame = -2 Query: 87 QVTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLN 146 Q TLVDCPGHASLI+TIIGGA IID+M LVIDVTKG+ T +AECLVIG+I KL+VVLN Sbjct: 76540 QFTLVDCPGHASLIKTIIGGA*IIDMMFLVIDVTKGI*T*TAECLVIGEILADKLIVVLN 76361 Query: 147 KIDLLPEGKRQAAIDKMTKKMQKTLENTKFRG-APIIPVXXXXXXXXXXXXXXXXXIPEL 205 KIDL E I+K K + L TKF P++PV I +L Sbjct: 76360 KIDLATE----EVINKQKKIIANVLSKTKFGN*VPLVPVSAI*ALG----------IEDL 76223 Query: 206 IELLTSQISIPTRDP--SGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALKV 263 + +L I++P R + L +DHCF IKG GTV TGTI+ GS+ D V P L + Sbjct: 76222 LGILLQNITVPNR*A*LNKGLLFMIDHCF*IKG*GTVTTGTIIQGSMKPNDEVYFPMLNL 76043 Query: 264 VKKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERGLVCAPESLHTVHAALISVEKIP 323 KK+KS+ MF P+ GDR+ T D K +ERG+VC P + + +I +KI Sbjct: 76042 NKKIKSL*MFKKPV*IGEPGDRIAALFTNLDAKEIERGIVC*PGIVSLLENIVIDFKKIS 75863 Query: 324 YFRGPLQTKAKFHITVGHETVMG 346 Y++G L++ KFHIT GH TVMG Sbjct: 75862 YYKG*LKS*NKFHITSGHLTVMG 75794 Score = 90.1 bits (222), Expect = 1e-17 Identities = 49/131 (37%), Positives = 81/131 (61%), Gaps = 6/131 (4%) Frame = -3 Query: 411 WALVEFEKPVTCPRLCLVIGSRLDADIHTNTCRLAFHGILLHG-----LEDRNYADSFLP 465 + +++ EKP+ LVI S+LD D+ N CR+AF+G +L+ L N+ Sbjct: 75654 FGVLQLEKPLIASMNSLVIASKLDTDLEANICRIAFYGNILYSYTT**LFQ*NF------ 75493 Query: 466 RLKVYKLKHKHGLVERAMDDYSVIGRSLFKKETNIQLFVGLKVHLSTGEL-GIIDSAFGQ 524 L++++ K K+G VE+ +D+Y+++ + LFKKETNI ++G + + G + G IDSAFG+ Sbjct: 75492 -LRIFRKKTKNGKVEKVIDNYTLLIKDLFKKETNIANYIGKLIVIK*GNIQGKIDSAFGK 75316 Query: 525 SGKFKIHIPGG 535 SGK K+ + G Sbjct: 75315 SGKVKVFVESG 75283 Score = 37.0 bits (84), Expect(2) = 1e-57 Identities = 24/52 (46%), Positives = 24/52 (46%), Gaps = 8/52 (15%) Frame = -3 Query: 13 LGHIDSGKXXXXXXXXXXXXXXX--------FDKQPQSRERGITLDLGFSCF 56 LGHIDSGK DK P S ERGITLDLGFS F Sbjct: 76755 LGHIDSGKTSLVKTLSKVINPSTN*ITSTASLDKNP*S*ERGITLDLGFSAF 76600 >scaffold_93 Length = 332513 Score = 91.7 bits (226), Expect = 3e-18 Identities = 65/227 (28%), Positives = 111/227 (48%), Gaps = 6/227 (2%) Frame = +2 Query: 91 VDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAE-CLVIGQIACQKLVVVLNKID 149 VDCPGH ++ +I GA +D +LV+ T G + E L+ Q+ + ++V +NKID Sbjct: 239822 VDCPGHIDYVKNMITGAAKMDAAILVVAATDGCMA*TREHVLLCRQVGVETIIVFVNKID 240001 Query: 150 LLPEGKRQAAIDKMTKKMQKTLENTKFRG--APIIPVXXXXXXXXXXXXXXXXXIPELIE 207 L + + ++ ++++ L ++ G A I+ I +L+E Sbjct: 240002 LAKDPEIHELVEM---EIRELLSKYEYDGDNAKIVKGSALLASNDQEPELGEKSILQLLE 240172 Query: 208 LLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALKVVK-- 265 + +I IP R PFLMS++ + I G+GTV+TGTI G S+ D++E+ K Sbjct: 240173 TMDKEIKIP*RPIDKPFLMSIEGTYHIAGRGTVVTGTID*GKASIKDNIEVVGYGKPK*T 240352 Query: 266 KVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERG-LVCAPESLHT 311 + ++ F + GD +GI + + RG ++C P SL T Sbjct: 240353 AIVGVETFKKQLDFGEAGDNVGILIRGLTRDDVRRG*VLCKPGSLTT 240493 >scaffold_118 Length = 285946 Score = 90.5 bits (223), Expect = 7e-18 Identities = 65/227 (28%), Positives = 110/227 (48%), Gaps = 6/227 (2%) Frame = -3 Query: 91 VDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAE-CLVIGQIACQKLVVVLNKID 149 VDCPGH ++ +I GA +D +LV+ T G + E L+ Q+ + ++V +NKID Sbjct: 72626 VDCPGHIDYVKNMITGAAKMDAAILVVAATDGCMA*TREHVLLCRQVGVETIIVFVNKID 72447 Query: 150 LLPEGKRQAAIDKMTKKMQKTLENTKFRG--APIIPVXXXXXXXXXXXXXXXXXIPELIE 207 L + + ++ ++++ L ++ G A I+ I +L+E Sbjct: 72446 LAKDPEIHELVEM---EIRELLSKYEYDGDNAKIVKGSALLASNDQEPELGEKSILQLLE 72276 Query: 208 LLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALKVVK-- 265 + +I IP R PFLMS++ + I G+GTV+TGTI G S D++E+ K Sbjct: 72275 TMDKEIKIP*RTIDKPFLMSIEGTYHIAGRGTVVTGTID*GKASTKDNIEVVGYGKPK*T 72096 Query: 266 KVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERG-LVCAPESLHT 311 + ++ F + GD +GI + + RG ++C P SL T Sbjct: 72095 AIVGVETFKKQLDFGEAGDNVGILIRGLTRDDVRRG*VLCKPGSLTT 71955 >scaffold_115 Length = 292917 Score = 72.0 bits (175), Expect = 3e-12 Identities = 65/281 (23%), Positives = 109/281 (38%), Gaps = 12/281 (4%) Frame = +3 Query: 37 DKQPQSRERGITLDLGFSCFSVPLPARLRSSXXXXXXXXXXXXXXXXXXXQVTLVDCPGH 96 D RERGIT+D+ F T++D PGH Sbjct: 94407 DNLKAERERGITIDISLWKFET-------------------------NKYYYTVIDAPGH 94511 Query: 97 ASLIRTIIGGAQIIDLMMLVI-----DVTKGMQTQS---AECLVIGQIACQKLVVVLNKI 148 I+ +I G D+ +L+I + G+ + L+ + + ++ NK+ Sbjct: 94512 RDFIKNMITGTS*ADVALLMIASPAGEFEAGISKEG*TREHVLLAYTLGVK*MICATNKM 94691 Query: 149 DLLPEGKRQAAIDKMTKKMQKTLENTKFR--GAPIIPVXXXXXXXXXXXXXXXXXI--PE 204 D Q D++ K+M+ L+ + P IP+ P Sbjct: 94692 DEKTVNYAQGRYDEIVKEMRDYLKKVGYNPDNVPFIPISGWVGDNMLEKSANFGWYKGPT 94871 Query: 205 LIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALKVV 264 L+E L + ++ P R P + + + I G GTV G + +G + G V + Sbjct: 94872 LLEALDA-VTPPKRPTEKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVV*FAPSAIT 95048 Query: 265 KKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERGLVCA 305 +VKS++M H + A+ GD +G V K L+RG VC+ Sbjct: 95049 TEVKSVEMHHEALPEAVPGDNVGFNVKNIAVKDLKRGFVCS 95171 >scaffold_113 Length = 295349 Score = 50.8 bits (120), Expect(2) = 4e-10 Identities = 31/101 (30%), Positives = 50/101 (49%) Frame = -3 Query: 205 LIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALKVV 264 L+E L + ++ P R P + + + I G GTV G + +G + G V + Sbjct: 202059 LLEALDA-VTPPKRPTEKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVV*FAPSAIT 201883 Query: 265 KKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERGLVCA 305 +VKS++M H + A+ GD +G V K L+RG VC+ Sbjct: 201882 TEVKSVEMHHEALPEAVPGDNVGFNVKNIAVKDLKRGFVCS 201760 Score = 37.7 bits (86), Expect = 0.056 Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 7/120 (5%) Frame = -3 Query: 37 DKQPQSRERGITLDLGFSCFSVPLPARLRSSXXXXXXXXXXXXXXXXXXXQVTLVDCPGH 96 D + +E+G+T+D+ + +V + R Q L+D PGH Sbjct: 226566 DMTKEEKEKGVTMDMAYK--TVVIGGR-----------------------QYNLLDSPGH 226462 Query: 97 ASLIRTIIGGAQIIDLMMLVIDVTKGMQTQS-------AECLVIGQIACQKLVVVLNKID 149 +I GA D +LV+D TK S + +I + +++VV LNK+D Sbjct: 226461 QDFAPYLIAGAA*ADYAILVVDTTKNAFENSIKSGMLREKL*LISAMLIKEIVVALNKMD 226282 Score = 33.5 bits (75), Expect(2) = 4e-10 Identities = 32/157 (20%), Positives = 57/157 (36%), Gaps = 10/157 (6%) Frame = -2 Query: 37 DKQPQSRERGITLDLGFSCFSVPLPARLRSSXXXXXXXXXXXXXXXXXXXQVTLVDCPGH 96 D RERGIT+D+ F T++D PGH Sbjct: 202528 DNLKAERERGITIDISLWKFET-------------------------NKYYYTVIDAPGH 202424 Query: 97 ASLIRTIIGGAQIIDLMMLVI-----DVTKGMQTQS---AECLVIGQIACQKLVVVLNKI 148 I+ +I G D+ +L+I + G+ + L+ + + ++ NK+ Sbjct: 202423 RDFIKNMITGTS*ADVALLMIASPAGEFEAGISKEG*TREHVLLAYTLGVK*MICATNKM 202244 Query: 149 DLLPEGKRQAAIDKMTKKMQKTLENTKFR--GAPIIP 183 D Q D++ K+M+ L+ + P +P Sbjct: 202243 DEKTVNYAQGRYDEIVKEMRDYLKKVGYNPDNVPFLP 202133 >scaffold_599 Length = 2277 Score = 63.5 bits (153), Expect = 1e-09 Identities = 64/281 (22%), Positives = 105/281 (37%), Gaps = 12/281 (4%) Frame = -1 Query: 37 DKQPQSRERGITLDLGFSCFSVPLPARLRSSXXXXXXXXXXXXXXXXXXXQVTLVDCPGH 96 D RERGIT+D+ F T++D PGH Sbjct: 1212 DNLKDERERGITIDISLWKFET-------------------------NKYYYTVIDAPGH 1108 Query: 97 ASLIRTIIGGAQIIDLMMLVIDVTKGMQT--------QSAECLVIGQIACQKLVVVLNKI 148 I+ +I G D+ M++I T G L+ + + L+ +NK+ Sbjct: 1107 RDFIKNMITGTT*ADIAMIMIAATAGEFEVGISQNG*TKEHILLAYTLGVR*LICAINKM 928 Query: 149 DLLPEGKRQAAIDKMTKKMQKTLENTKFR--GAPIIPVXXXXXXXXXXXXXXXXXI--PE 204 D + D++ K+M L+ + P IP+ P Sbjct: 927 DEKSVLYSKGRYDEIVKEMSIYLKKVGYNPDNVPYIPISGWNGDNMLEKSINLQWYNGPT 748 Query: 205 LIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALKVV 264 L+E L + ++ P R P + + + I G GTV G + +G ++ G + + Sbjct: 747 LLEALDA-VTPPKRPTEKPLRLPLQDVYKIGGIGTVPVGRVETGVLTRGMVI*FAPSGIA 571 Query: 265 KKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERGLVCA 305 +VKS++M H A+ GD +G V K L RG V + Sbjct: 570 SEVKSIEMHH*DHPEAIPGDNVGFNVKGVSVKDL*RGYVAS 448 >scaffold_90 Length = 339195 Score = 58.5 bits (140), Expect = 3e-08 Identities = 59/281 (20%), Positives = 107/281 (38%), Gaps = 12/281 (4%) Frame = +2 Query: 37 DKQPQSRERGITLDLGFSCFSVPLPARLRSSXXXXXXXXXXXXXXXXXXXQVTLVDCPGH 96 D RERGIT+D+ F ++D PGH Sbjct: 149339 DNLKDERERGITIDISTQKFET-------------------------NNYNYRVIDAPGH 149443 Query: 97 ASLIRTIIGGAQIIDLMMLVIDVTKGM----QTQSA----ECLVIGQIACQKLVVVLNKI 148 ++ +I G D+ +L+I G +Q+ L+ + + +V +NK+ Sbjct: 149444 RDFLKNMITGTS*ADVALLMISSAAGEFEAGMSQNG*TKEHILLAYTLGIR*IVCAINKM 149623 Query: 149 DLLPEGKRQAAIDKMTKKMQKTLENTKF--RGAPIIPVXXXXXXXXXXXXXXXXXI--PE 204 D + D + + ++ LE + + IP+ P Sbjct: 149624 DEKSVNYSKERYDGIVE*IKTYLEKVGYNPKNTMFIPISGWEGDNMLKRSPNLLWYHGPT 149803 Query: 205 LIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALKVV 264 + E L + I+ P + P +++ + I G GTV GT+ +G + G ++ ++ Sbjct: 149804 VFEALDT-ITPPKKHADKPLRFPLENVYKIGGIGTVPIGTL*TGVLKTGMMIQFAPSGII 149980 Query: 265 KKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERGLVCA 305 + KS++ FH + A GD +G V K L+RG V + Sbjct: 149981 AEAKSIEAFHEELQVAFPGDYVGFNVKNVACKDLKRGYVAS 150103 >scaffold_22 Length = 570993 Score = 43.9 bits (102), Expect = 8e-04 Identities = 22/68 (32%), Positives = 37/68 (54%) Frame = -2 Query: 90 LVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNKID 149 ++D PGH S G+ + DL +LVID+ G++ + E L + ++ ++ LNKID Sbjct: 567395 IIDTPGHESFSNLRTRGSSLCDLAILVIDLMHGLEN*TLESLELLKLRKTPFIIALNKID 567216 Query: 150 LLPEGKRQ 157 E K + Sbjct: 567215 RCVEWKNK 567192 >scaffold_29 Length = 537272 Score = 43.5 bits (101), Expect = 0.001 Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 2/66 (3%) Frame = -1 Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGM-QTQSAECLVIGQIACQKLVVVL- 145 ++ VDCPGH L+ T++ GA ++D +L++ Q Q+ E LV I K V+V+ Sbjct: 470273 ISFVDCPGHDILMSTMLTGAAVMDCALLIVAANMPCPQPQTQEHLVALVITKLKYVIVIQ 470094 Query: 146 NKIDLL 151 NK+D++ Sbjct: 470093 NKVDII 470076 >scaffold_41 Length = 483735 Score = 43.5 bits (101), Expect = 0.001 Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 2/66 (3%) Frame = -1 Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGM-QTQSAECLVIGQIACQKLVVVL- 145 ++ VDCPGH L+ T++ GA ++D +L++ Q Q+ E LV I K V+V+ Sbjct: 396621 ISFVDCPGHDILMSTMLTGAAVMDCALLIVAANMPCPQPQTQEHLVALVITKLKYVIVIQ 396442 Query: 146 NKIDLL 151 NK+D++ Sbjct: 396441 NKVDII 396424 >scaffold_77 Length = 360245 Score = 41.2 bits (95), Expect = 0.005 Identities = 26/90 (28%), Positives = 41/90 (45%) Frame = -3 Query: 216 PTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALKVVKKVKSMQMFHM 275 P R P + + + I G GTV G + +G ++ G + + +VKS++M H Sbjct: 206280 PKRPTEKPLRLPLQDVYKIGGIGTVPVGRVETGVLTRGMVI*FAPSGIASEVKSIEMHH* 206101 Query: 276 PITSAMQGDRLGICVTQFDPKLLERGLVCA 305 A+ GD +G V K L RG V + Sbjct: 206100 DHPEAIPGDNVGFNVKGVSVKDL*RGYVAS 206011 >scaffold_130 Length = 264698 Score = 39.3 bits (90), Expect = 0.019 Identities = 20/64 (31%), Positives = 33/64 (51%) Frame = +2 Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNK 147 + L D PGH + + + + D M+L+IDV +G+ + + +VVV+NK Sbjct: 50609 INLYDTPGHVNFMDEVCCALRASDAMLLIIDVIEGVMMTTEMLIKAAVKEKMPIVVVINK 50788 Query: 148 IDLL 151 ID L Sbjct: 50789 IDRL 50800 >scaffold_140 Length = 252200 Score = 39.3 bits (90), Expect = 0.019 Identities = 20/64 (31%), Positives = 33/64 (51%) Frame = -3 Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNK 147 + L D PGH + + + + D M+L+IDV +G+ + + +VVV+NK Sbjct: 215370 INLYDTPGHVNFMDEVCCALRASDAMLLIIDVIEGVMMTTEMLIKAAVKEKMPIVVVINK 215191 Query: 148 IDLL 151 ID L Sbjct: 215190 IDRL 215179 >scaffold_151 Length = 234462 Score = 36.2 bits (82), Expect = 0.16 Identities = 18/62 (29%), Positives = 31/62 (50%) Frame = -3 Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNK 147 + L+D PGH + ++ D ++V+D +G+ Q+ L K VV++NK Sbjct: 109876 INLIDSPGHVDFSSEVTAALRVTDGALVVVDCVEGVCVQTETVLRQAMQEKIKPVVMINK 109697 Query: 148 ID 149 ID Sbjct: 109696 ID 109691 >scaffold_134 Length = 262358 Score = 35.0 bits (79), Expect = 0.36 Identities = 16/59 (27%), Positives = 36/59 (61%), Gaps = 2/59 (3%) Frame = -2 Query: 111 DLMMLVIDVTKGM--QTQSAECLVIGQIACQKLVVVLNKIDLLPEGKRQAAIDKMTKKM 167 D++++++D + + + E ++G +K+++VLNKIDL+P G A + + K++ Sbjct: 228157 DILLIILDARDPLACRCKHLEREILGMPGDKKIILVLNKIDLVPPGNADAWLAHLRKRI 227981 >scaffold_84 Length = 354111 Score = 34.3 bits (77), Expect = 0.62 Identities = 49/226 (21%), Positives = 90/226 (39%), Gaps = 14/226 (6%) Frame = +1 Query: 90 LVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAE--------CLVIGQIACQKL 141 L D PGH + + +I GA DL L++ G E L+ + + Sbjct: 17896 LADAPGHKNYVPNMIMGAC*ADLAGLIVSAKTGEFESGFEKGGQT*EHALLAKSLGVDHI 18075 Query: 142 VVVLNKIDLLPEGKRQAAIDKMTKKM-QKTLENTKFRGAPIIPVXXXXXXXXXXXXXXXX 200 ++++ K+D + + + ++ + + L+ KF +IP+ Sbjct: 18076 IIIVTKMDTIDWN*DR--FNLIS*NI*EFVLK*CKFDNIYVIPIDALSGSNIKSRVDESK 18249 Query: 201 XI----PELIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSV 256 P LI+L+ + +SIP R+ GP M + F G + G + SG I G V Sbjct: 18250 CNWYKGPSLIDLIDT-VSIPKRNEEGPIRMPILDKFKDMG-SLYIYGKLESGKIIEGLDV 18423 Query: 257 EIPALKVVKKVKSM-QMFHMPITSAMQGDRLGICVTQFDPKLLERG 301 I K ++ + M + A G+ + I V + + ++RG Sbjct: 18424 SIYPKK*PFQITELYNMKDQKMKYAKAGENIKIKVKNIEEEEIKRG 18561 >scaffold_157 Length = 222233 Score = 33.9 bits (76), Expect = 0.81 Identities = 16/63 (25%), Positives = 36/63 (57%), Gaps = 2/63 (3%) Frame = -3 Query: 111 DLMMLVIDVTKGM--QTQSAECLVIGQIACQKLVVVLNKIDLLPEGKRQAAIDKMTKKMQ 168 D++++++D + + + E ++G +K+++VLNKIDL+P G A + + ++ Sbjct: 29058 DILLIILDARDPLACRCKHLEREILGMPGDKKIILVLNKIDLVPPGNADAWLAHLRREFA 28879 Query: 169 KTL 171 L Sbjct: 28878 TVL 28870 >scaffold_161 Length = 215326 Score = 32.3 bits (72), Expect = 2.4 Identities = 17/62 (27%), Positives = 30/62 (48%) Frame = -1 Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNK 147 + L+D PGH + ++ D ++V+D +G+ + L K VV++NK Sbjct: 99325 INLIDSPGHVDFSSEVTAALRVTDGALVVVDCVEGVCV*TETVLRQAM*EKIKPVVMINK 99146 Query: 148 ID 149 ID Sbjct: 99145 ID 99140 >scaffold_267 Length = 10921 Score = 32.3 bits (72), Expect = 2.4 Identities = 17/62 (27%), Positives = 30/62 (48%) Frame = -3 Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNK 147 + L+D PGH + ++ D ++V+D +G+ + L K VV++NK Sbjct: 10352 INLIDSPGHVDFSSEVTAALRVTDGALVVVDCVEGVCV*TETVLRQAMQEKIKPVVMVNK 10173 Query: 148 ID 149 ID Sbjct: 10172 ID 10167 >scaffold_664 Length = 2080 Score = 32.3 bits (72), Expect = 2.4 Identities = 17/62 (27%), Positives = 30/62 (48%) Frame = -1 Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNK 147 + L+D PGH + ++ D ++V+D +G+ + L K VV++NK Sbjct: 277 INLIDSPGHVDFSSEVTAALRVTDGALVVVDCVEGVCV*TETVLRQAMQEKIKPVVMVNK 98 Query: 148 ID 149 ID Sbjct: 97 ID 92 >scaffold_171 Length = 174740 Score = 32.3 bits (72), Expect = 2.4 Identities = 17/62 (27%), Positives = 30/62 (48%) Frame = -2 Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNK 147 + L+D PGH + ++ D ++V+D +G+ + L K VV++NK Sbjct: 94303 INLIDSPGHVDFSSEVTAALRVTDGALVVVDCVEGVCV*TETVLRQAMQEKIKPVVMVNK 94124 Query: 148 ID 149 ID Sbjct: 94123 ID 94118 >scaffold_60 Length = 437965 Score = 32.3 bits (72), Expect = 2.4 Identities = 17/62 (27%), Positives = 30/62 (48%) Frame = -2 Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNK 147 + L+D PGH + ++ D ++V+D +G+ + L K VV++NK Sbjct: 100164 INLIDSPGHVDFSSEVTAALRVTDGALVVVDCVEGVCV*TETVLRQAMQEKIKPVVMVNK 99985 Query: 148 ID 149 ID Sbjct: 99984 ID 99979 >scaffold_52 Length = 461155 Score = 32.0 bits (71), Expect = 3.1 Identities = 17/62 (27%), Positives = 30/62 (48%) Frame = +3 Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNK 147 + L+D PGH + ++ D ++V+D +G+ + L K VV++NK Sbjct: 363402 INLIDSPGHVDFSSEVTAALRVTDGALVVVDCVEGVCV*TETVLRQAM*EKIKPVVMVNK 363581 Query: 148 ID 149 ID Sbjct: 363582 ID 363587 Score = 32.0 bits (71), Expect = 3.1 Identities = 17/62 (27%), Positives = 30/62 (48%) Frame = +1 Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNK 147 + L+D PGH + ++ D ++V+D +G+ + L K VV++NK Sbjct: 372778 INLIDSPGHVDFSSEVTAALRVTDGALVVVDCVEGVCV*TETVLRQAM*EKIKPVVMVNK 372957 Query: 148 ID 149 ID Sbjct: 372958 ID 372963 >scaffold_27 Length = 545223 Score = 32.0 bits (71), Expect = 3.1 Identities = 17/62 (27%), Positives = 30/62 (48%) Frame = +2 Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNK 147 + L+D PGH + ++ D ++V+D +G+ + L K VV++NK Sbjct: 387884 INLIDSPGHVDFSSEVTAALRVTDGALVVVDCVEGVCV*TETVLRQAM*EKIKPVVMVNK 388063 Query: 148 ID 149 ID Sbjct: 388064 ID 388069 >scaffold_9 Length = 703586 Score = 32.0 bits (71), Expect = 3.1 Identities = 16/61 (26%), Positives = 32/61 (52%) Frame = +3 Query: 90 LVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNKID 149 L+D PGH + + + +L+ID T+G+ + ++ + K++ V+NKID Sbjct: 512958 LIDTPGHVDFTYEVSRSMRACEGAILLIDATQGI*A*TLSNYILAKK*NLKIIPVINKID 513137 Query: 150 L 150 + Sbjct: 513138 M 513140 >scaffold_82 Length = 357438 Score = 31.2 bits (69), Expect = 5.3 Identities = 17/64 (26%), Positives = 32/64 (50%) Frame = +2 Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNK 147 + L+D PGH + ++ D ++++DV +G + + L K ++VLNK Sbjct: 45227 INLIDSPGHVEFSSEVQAALRLTDGALVLVDVLEGFSS*TFNVLK*MFEEGIKGILVLNK 45406 Query: 148 IDLL 151 +D L Sbjct: 45407 VDRL 45418 Database: genome.fa Posted date: Feb 10, 2010 10:01 AM Number of letters in database: 71,881,135 Number of sequences in database: 697 Lambda K H 0.321 0.137 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 33,511,956 Number of Sequences: 697 Number of extensions: 399033 Number of successful extensions: 1087 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 35 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 998 Number of HSP's gapped (non-prelim): 134 length of query: 596 length of database: 23,960,378 effective HSP length: 112 effective length of query: 484 effective length of database: 23,882,314 effective search space: 11559039976 effective search space used: 11559039976 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 67 (30.4 bits)