TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SPP00000038_1.0 # Protein # Eukaryotic elongation factor (eEFSec) # Homo sapiens # Complete (596 letters) Database: genome.fa 1696 sequences; 31,706,682 total letters Searching...................................................done Score E Sequences producing significant alignments: (bits) Value mex409j13.q1k 288 8e-78 mex386e10.q1k 87 4e-17 mex99f20.p1k 81 2e-15 mex303a15.p1k 81 2e-15 mex425i21.q1k 81 2e-15 mex123f07.p1k 81 2e-15 mex54a16.p1k 81 2e-15 mex320d04.p1k 77 3e-14 mex484k20.q1k 61 3e-09 mex488e14.p1k 49 1e-05 mex22g23.p1k 49 1e-05 mex309d24.q1k 48 2e-05 mex469p04.p1k 46 9e-05 mex435o22.q1k 46 9e-05 mex239b05.q1k 44 5e-04 mex339n17.q1k 44 5e-04 mex384f04.p1k 44 5e-04 mex378p04.q1k 43 8e-04 mex556b19.q1k 38 0.019 1036_mexFOS1_35k08.p1kpIBF 38 0.025 mex308d23.q1k 37 0.032 mex259m22.p1k 35 0.21 mex315k04.p1k 34 0.36 mex469n10.q1k 32 1.0 mex99h04.q1k 32 1.4 mex106a04.p1k 31 2.3 mex379f12.p1k 31 2.3 mex131d09.p1k 30 3.9 mex380f18.p1k 30 6.7 >mex409j13.q1k Length = 36118 Score = 288 bits (737), Expect = 8e-78 Identities = 213/680 (31%), Positives = 311/680 (45%), Gaps = 98/680 (14%) Frame = +3 Query: 13 LGHIDSGKXXXXXXXXXXXXXXXFDKQPQSRERGITLDLGFSCFSVPLPARLRSSXXXXX 72 LGH+DSGK FDK PQS+ RGITLDLGFS V S Sbjct: 14634 LGHVDSGKTALAKALSSTASTAAFDKSPQSQSRGITLDLGFSACEV-------SVEDGNE 14792 Query: 73 XXXXXXXXXXXXXXQVTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLV 132 Q TLVDCPGHASLIRT++GGAQIID M+LVID TKGMQ Q+AECLV Sbjct: 14793 DATQVLRSADLTKVQCTLVDCPGHASLIRTVVGGAQIIDAMVLVIDATKGMQVQTAECLV 14972 Query: 133 IGQIACQKLVVVLNKIDLLP---EGKRQAAIDKMTKKMQKTLENTKFRGAPIIPVXXXXX 189 +G++ + LVVVLNK D + ++AA+ + +K+Q+ T++ API+ V Sbjct: 14973 LGEVLAKPLVVVLNKTDAIQGATPAAKEAALAALKRKLQQAFRRTRWPTAPIVEVAAAPR 15152 Query: 190 XXXXXXXXXXXXIPELIELLTSQISIPT--------RDPSGPFLMSVDHCFSIKGQGTVM 241 ++ L+ + + + F M VDHCF+++GQGTV Sbjct: 15153 EMAGGIGHPVNT-EAVLPLVLRAVDLAALKAAKESEAERPAQFYMLVDHCFAVRGQGTVF 15329 Query: 242 TGTILSGSISLGDSVEIPALKVVKKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERG 301 TGT+++G + +GD+V +P L+ +KVK +Q+FH P+ SA GDR+G+CVTQFDP +ERG Sbjct: 15330 TGTVVAGVVRVGDTVLVPELQTTRKVKGLQVFHKPVESAQSGDRVGLCVTQFDPTWMERG 15509 Query: 302 LVCAPES----LHTVHAALISVEKIPYFRGPLQTKAKFHITVGHETVMGRLMFFSPAP-- 355 ++C+ S L + + V ++ Y P T KFHIT+GH TVMG + +F P Sbjct: 15510 VLCSAASSGRTLVSSSQLIARVHRVRYHPLPCDTHTKFHITIGHATVMGAMRYFVRPPRT 15689 Query: 356 -DNFDQEPILDSFNFSQEYLFQEQYLSKDLTPAVTDNDEADKKAGQATE-GHCPRQQWAL 413 D + SFN S E + E+ L + + T D G+ + +A+ Sbjct: 15690 TQGLDVAGTVTSFNPSIESAYVEE-LGDGVVASYTSTDTTTGVPGRPLPVAPAEQDYYAV 15866 Query: 414 VEFEKPVTCPRLCLVIGSRLDADIHTNTCRLAFHGILLH----------------GLEDR 457 + E+PV +I RLD + N CR+A G + H G D Sbjct: 15867 LLLERPVLAAPGVSMIAMRLDVE-RENFCRIALAGTVCHVLSEEGAAVRTATTVPGSADH 16043 Query: 458 NYADSFLP---RLKVYKLKHKHGLVERAMDDYSVIGRSLFKKET---------------- 498 + +P RL V + +++ V+R +D S I + +T Sbjct: 16044 SATHGQVPAWRRLPVVRYRYRALRVDRVLDSRSCIADGVVSLQTPGAGGSGSRPAGASAG 16223 Query: 499 --------------------NIQLFVGLKVHL---------------STGEL-GIIDSAF 522 +Q F+ L V S G + GIIDS+F Sbjct: 16224 AKRDKGRVNVEARQKAELFAEVQKFLRLAVVFEPEDGDAAVTTPQASSPGAVKGIIDSSF 16403 Query: 523 GQSGKFKIHIPGGL--SPESKKILTP--ALKKRARAGRGEATRQEESAERSEPSQHVV-- 576 G++GK K+ G + P + P + AR R +T+ +S + + Sbjct: 16404 GKTGKVKLVFDGPVFADPAASAATAPIGSFVSAARNKRNNSTKGPDSVDAGRSGGVFLRP 16583 Query: 577 --LSLTFKRYVFDTHKRMVQ 594 + L K+Y F H + Q Sbjct: 16584 GRILLVLKKYPFALHSGLEQ 16643 >mex386e10.q1k Length = 60303 Score = 87.0 bits (214), Expect = 4e-17 Identities = 61/227 (26%), Positives = 103/227 (45%), Gaps = 12/227 (5%) Frame = +1 Query: 91 VDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVI-GQIACQKLVVVLNKID 149 +DCPGH ++ +I GA +D ++V+ T G+ Q+ E L+I QI LV +NK+D Sbjct: 16573 IDCPGHMDFVKNMITGAAQMDGGIIVVAATDGVMPQTREHLLICSQIGLPALVGFINKVD 16752 Query: 150 LLPEGKRQAAIDKMTKKMQKTLENTKFRGAPIIPVXXXXXXXXXXXXXXXXXIPELIELL 209 + E D + ++++ LE KF V I EL+ Sbjct: 16753 MTDED----TCDLVDMEVREQLEKYKFPAEETPIVRGSALKAVEGDAKYEENILELVRKC 16920 Query: 210 TSQISIPTRDPSGPFLMSVDHCFSI--KGQGTVMTGTILSGSISLGDSVEIPALKVVK-- 265 I P R+ PFLM+++H + I + ++TG + G + L E+ V K Sbjct: 16921 DEWIPDPPRNTDKPFLMAIEHVYEIGKDKKSVIVTGRVDQGVLKLNTDAELAGFSVKKST 17100 Query: 266 -KVKSMQMFHMPITSAMQGDRLGICVT------QFDPKLLERGLVCA 305 +V ++M+H ++ M GD +G+ + +ERG+V A Sbjct: 17101 VRVTGIEMYHKTLSECMPGDSVGVSIVGTGDTISLSKDNVERGMVMA 17241 >mex99f20.p1k Length = 2336 Score = 81.3 bits (199), Expect = 2e-15 Identities = 71/280 (25%), Positives = 111/280 (39%), Gaps = 12/280 (4%) Frame = -2 Query: 37 DKQPQSRERGITLDLGFSCFSVPLPARLRSSXXXXXXXXXXXXXXXXXXXQVTLVDCPGH 96 DK RERGIT+D+ F P T++D PGH Sbjct: 1054 DKLKAERERGITIDIALWKFESPKSV-------------------------FTIIDAPGH 950 Query: 97 ASLIRTIIGGAQIIDLMMLVIDVTKG-------MQTQSAE-CLVIGQIACQKLVVVLNKI 148 I+ +I G D +L+ID T G Q+ E L+ + +++VV NK+ Sbjct: 949 RDFIKNMITGTSQADAAILMIDSTHGGFEAGISKDGQTREHALLAFTLGVKQMVVCCNKM 770 Query: 149 DLLPEGKRQAAIDKMTKKMQKTLENTKFRGAPI--IPVXXXXXXXXXXXXXXXXXI--PE 204 D Q+ D+++K++ L+ + + IP+ P Sbjct: 769 DDKTVMYAQSRYDEISKEVSAYLKRVGYNPEKVRFIPISGWQGDNMIDKSDNMPWYKGPT 590 Query: 205 LIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALKVV 264 L++ L + P R P + + + I G GTV G + +G + GD V V Sbjct: 589 LLDAL-DMLEPPVRPVDKPLRLPLQDVYKIGGIGTVPVGRVETGIMKPGDVVTFAPANVT 413 Query: 265 KKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERGLVC 304 +VKS++M H + A GD +G V K + RG VC Sbjct: 412 TEVKSIEMHHEQLAEAQPGDNVGFNVKNVSVKDIRRGNVC 293 >mex303a15.p1k Length = 24893 Score = 81.3 bits (199), Expect = 2e-15 Identities = 71/280 (25%), Positives = 111/280 (39%), Gaps = 12/280 (4%) Frame = -1 Query: 37 DKQPQSRERGITLDLGFSCFSVPLPARLRSSXXXXXXXXXXXXXXXXXXXQVTLVDCPGH 96 DK RERGIT+D+ F P T++D PGH Sbjct: 23480 DKLKAERERGITIDIALWKFESPKSV-------------------------FTIIDAPGH 23376 Query: 97 ASLIRTIIGGAQIIDLMMLVIDVTKG-------MQTQSAE-CLVIGQIACQKLVVVLNKI 148 I+ +I G D +L+ID T G Q+ E L+ + +++VV NK+ Sbjct: 23375 RDFIKNMITGTSQADAAILMIDSTHGGFEAGISKDGQTREHALLAFTLGVKQMVVCCNKM 23196 Query: 149 DLLPEGKRQAAIDKMTKKMQKTLENTKFRGAPI--IPVXXXXXXXXXXXXXXXXXI--PE 204 D Q+ D+++K++ L+ + + IP+ P Sbjct: 23195 DDKTVMYAQSRYDEISKEVSAYLKRVGYNPEKVRFIPISGWQGDNMIDKSDNMPWYKGPT 23016 Query: 205 LIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALKVV 264 L++ L + P R P + + + I G GTV G + +G + GD V V Sbjct: 23015 LLDAL-DMLEPPVRPVDKPLRLPLQDVYKIGGIGTVPVGRVETGIMKPGDVVTFAPANVT 22839 Query: 265 KKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERGLVC 304 +VKS++M H + A GD +G V K + RG VC Sbjct: 22838 TEVKSIEMHHEQLAEAQPGDNVGFNVKNVSVKDIRRGNVC 22719 >mex425i21.q1k Length = 2831 Score = 81.3 bits (199), Expect = 2e-15 Identities = 71/280 (25%), Positives = 111/280 (39%), Gaps = 12/280 (4%) Frame = +1 Query: 37 DKQPQSRERGITLDLGFSCFSVPLPARLRSSXXXXXXXXXXXXXXXXXXXQVTLVDCPGH 96 DK RERGIT+D+ F P T++D PGH Sbjct: 844 DKLKAERERGITIDIALWKFESPKSV-------------------------FTIIDAPGH 948 Query: 97 ASLIRTIIGGAQIIDLMMLVIDVTKG-------MQTQSAE-CLVIGQIACQKLVVVLNKI 148 I+ +I G D +L+ID T G Q+ E L+ + +++VV NK+ Sbjct: 949 RDFIKNMITGTSQADAAILMIDSTHGGFEAGISKDGQTREHALLAFTLGVKQMVVCCNKM 1128 Query: 149 DLLPEGKRQAAIDKMTKKMQKTLENTKFRGAPI--IPVXXXXXXXXXXXXXXXXXI--PE 204 D Q+ D+++K++ L+ + + IP+ P Sbjct: 1129 DDKTVMYAQSRYDEISKEVSAYLKRVGYNPEKVRFIPISGWQGDNMIDKSDNMPWYKGPT 1308 Query: 205 LIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALKVV 264 L++ L + P R P + + + I G GTV G + +G + GD V V Sbjct: 1309 LLDAL-DMLEPPVRPVDKPLRLPLQDVYKIGGIGTVPVGRVETGIMKPGDVVTFAPANVT 1485 Query: 265 KKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERGLVC 304 +VKS++M H + A GD +G V K + RG VC Sbjct: 1486 TEVKSIEMHHEQLAEAQPGDNVGFNVKNVSVKDIRRGNVC 1605 >mex123f07.p1k Length = 2568 Score = 81.3 bits (199), Expect = 2e-15 Identities = 71/280 (25%), Positives = 111/280 (39%), Gaps = 12/280 (4%) Frame = -3 Query: 37 DKQPQSRERGITLDLGFSCFSVPLPARLRSSXXXXXXXXXXXXXXXXXXXQVTLVDCPGH 96 DK RERGIT+D+ F P T++D PGH Sbjct: 2095 DKLKAERERGITIDIALWKFESPKSV-------------------------FTIIDAPGH 1991 Query: 97 ASLIRTIIGGAQIIDLMMLVIDVTKG-------MQTQSAE-CLVIGQIACQKLVVVLNKI 148 I+ +I G D +L+ID T G Q+ E L+ + +++VV NK+ Sbjct: 1990 RDFIKNMITGTSQADAAILMIDSTHGGFEAGISKDGQTREHALLAFTLGVKQMVVCCNKM 1811 Query: 149 DLLPEGKRQAAIDKMTKKMQKTLENTKFRGAPI--IPVXXXXXXXXXXXXXXXXXI--PE 204 D Q+ D+++K++ L+ + + IP+ P Sbjct: 1810 DDKTVMYAQSRYDEISKEVSAYLKRVGYNPEKVRFIPISGWQGDNMIDKSDNMPWYKGPT 1631 Query: 205 LIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALKVV 264 L++ L + P R P + + + I G GTV G + +G + GD V V Sbjct: 1630 LLDAL-DMLEPPVRPVDKPLRLPLQDVYKIGGIGTVPVGRVETGIMKPGDVVTFAPANVT 1454 Query: 265 KKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERGLVC 304 +VKS++M H + A GD +G V K + RG VC Sbjct: 1453 TEVKSIEMHHEQLAEAQPGDNVGFNVKNVSVKDIRRGNVC 1334 >mex54a16.p1k Length = 1364 Score = 81.3 bits (199), Expect = 2e-15 Identities = 71/280 (25%), Positives = 111/280 (39%), Gaps = 12/280 (4%) Frame = -2 Query: 37 DKQPQSRERGITLDLGFSCFSVPLPARLRSSXXXXXXXXXXXXXXXXXXXQVTLVDCPGH 96 DK RERGIT+D+ F P T++D PGH Sbjct: 955 DKLKAERERGITIDIALWKFESPKSV-------------------------FTIIDAPGH 851 Query: 97 ASLIRTIIGGAQIIDLMMLVIDVTKG-------MQTQSAE-CLVIGQIACQKLVVVLNKI 148 I+ +I G D +L+ID T G Q+ E L+ + +++VV NK+ Sbjct: 850 RDFIKNMITGTSQADAAILMIDSTHGGFEAGISKDGQTREHALLAFTLGVKQMVVCCNKM 671 Query: 149 DLLPEGKRQAAIDKMTKKMQKTLENTKFRGAPI--IPVXXXXXXXXXXXXXXXXXI--PE 204 D Q+ D+++K++ L+ + + IP+ P Sbjct: 670 DDKTVMYAQSRYDEISKEVSAYLKRVGYNPEKVRFIPISGWQGDNMIDKSDNMPWYKGPT 491 Query: 205 LIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALKVV 264 L++ L + P R P + + + I G GTV G + +G + GD V V Sbjct: 490 LLDAL-DMLEPPVRPVDKPLRLPLQDVYKIGGIGTVPVGRVETGIMKPGDVVTFAPANVT 314 Query: 265 KKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERGLVC 304 +VKS++M H + A GD +G V K + RG VC Sbjct: 313 TEVKSIEMHHEQLAEAQPGDNVGFNVKNVSVKDIRRGNVC 194 >mex320d04.p1k Length = 1129 Score = 77.4 bits (189), Expect = 3e-14 Identities = 69/277 (24%), Positives = 109/277 (39%), Gaps = 12/277 (4%) Frame = +3 Query: 37 DKQPQSRERGITLDLGFSCFSVPLPARLRSSXXXXXXXXXXXXXXXXXXXQVTLVDCPGH 96 DK RERGIT+D+ F P T++D PGH Sbjct: 375 DKLKAERERGITIDIALWKFESPKSV-------------------------FTIIDAPGH 479 Query: 97 ASLIRTIIGGAQIIDLMMLVIDVTKG-------MQTQSAE-CLVIGQIACQKLVVVLNKI 148 I+ +I G D +L+ID T G Q+ E L+ + +++VV NK+ Sbjct: 480 RDFIKNMITGTSQADAAILMIDSTHGGFEAGISKDGQTREHALLAFTLGVKQMVVCCNKM 659 Query: 149 DLLPEGKRQAAIDKMTKKMQKTLENTKFRGAPI--IPVXXXXXXXXXXXXXXXXXI--PE 204 D Q+ D+++K++ L+ + + IP+ P Sbjct: 660 DDKTVMYAQSRYDEISKEVSAYLKRVGYNPEKVRFIPISGWQGDNMIDKSDNMPWYKGPT 839 Query: 205 LIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALKVV 264 L++ L + P R P + + + I G GTV G + +G + GD V V Sbjct: 840 LLDAL-DMLEPPVRPVDKPLRLPLQDVYKIGGIGTVPVGRVETGIMKPGDVVTFAPANVT 1016 Query: 265 KKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERG 301 +VKS++M H + A GD +G V K + RG Sbjct: 1017TEVKSIEMHHEQLAEAQPGDNVGFNVKNVSVKDIRRG 1127 >mex484k20.q1k Length = 49043 Score = 60.8 bits (146), Expect = 3e-09 Identities = 57/191 (29%), Positives = 93/191 (48%), Gaps = 13/191 (6%) Frame = +2 Query: 89 TLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGM-QTQSAECLVIGQ-IACQKLVVVLN 146 + VDCPGH L+ T++ GA I+D +L+I + Q Q+ E L + I L+V+ N Sbjct: 1157 SFVDCPGHDVLMATMLNGAAIMDAALLLIAANESFPQPQTLEHLAAAEMIGVSSLIVLQN 1336 Query: 147 KIDLLPEGKRQAAIDKMTKKMQKTLENTKFRGAPIIPVXXXXXXXXXXXXXXXXXIP--- 203 K+DL+ + +R AA + T T + AP+IPV IP Sbjct: 1337 KVDLVSK-ERAAAQYSIIHHYLAT--KTAYAKAPVIPVCAQQHMNISFLLDYLVHIPLPR 1507 Query: 204 ------ELIELLTS-QISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSV 256 + + +L S +S+P P+G D ++K G V+ GT+ +G + +GD + Sbjct: 1508 RQLHHAQYMNVLRSFDVSLP--GPAG------DDAKALK--GGVVGGTVAAGVLCVGDEI 1657 Query: 257 E-IPALKVVKK 266 E IP L V+++ Sbjct: 1658 EIIPGLLVLRR 1690 Score = 58.5 bits (140), Expect = 1e-08 Identities = 55/181 (30%), Positives = 81/181 (44%), Gaps = 11/181 (6%) Frame = +1 Query: 89 TLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGM-QTQSAECLVIGQI-ACQKLVVVLN 146 + VDCPGH L+ T++ GA I+D +L+I + Q Q+ E L +I + LVV+ N Sbjct: 4024 SFVDCPGHDVLMATMLNGAAIMDAALLLIAANESFPQPQTLEHLKAVEIMKLRHLVVLQN 4203 Query: 147 KIDLLPEGKRQAAIDKMTKKMQKTLENTKFRGAPIIPVXXXXXXXXXXXXXXXXXIPELI 206 KIDL+ E K + ++ L+N PI+P+ + L+ Sbjct: 4204 KIDLVGEVKAH----DQYRHVRAYLDNIAL-NVPIVPI----------SAQLKRNVDYLL 4338 Query: 207 ELLTSQISIPTRDPSGPFLMSVDHCFSIKG---------QGTVMTGTILSGSISLGDSVE 257 E L I +P R P M+V F I +G V GT+ G I +G VE Sbjct: 4339 EYLL-HIPMPVRQLKAPVRMTVVRSFDINKPGEGDIESLKGGVAGGTVTQGVIKVGQVVE 4515 Query: 258 I 258 I Sbjct: 4516 I 4518 >mex488e14.p1k Length = 70354 Score = 48.9 bits (115), Expect = 1e-05 Identities = 66/304 (21%), Positives = 114/304 (37%), Gaps = 14/304 (4%) Frame = +1 Query: 37 DKQPQSRERGITLDLGFSCFSVPLPARLRSSXXXXXXXXXXXXXXXXXXXQVTLVDCPGH 96 D+ + R RG+T+D G CF +V ++D PGH Sbjct: 56068 DQCEEERRRGVTIDSGSFCFETE-------------------------HRRVHILDAPGH 56172 Query: 97 ASLIRTIIGGAQIIDLMMLVID-VTKGMQT-----QSAECLVIGQIACQKLVVVLNKIDL 150 + +I A D +LV+ T +T + LV+ + +VV +NK+D Sbjct: 56173 KDFVLNMISSATQADAALLVVTAATSEFETGLHHGTKSHLLVLKTLGVGSIVVAVNKMDA 56352 Query: 151 LPEGKRQAAIDKMTKKMQKTLENTKFRG------APIIPVXXXXXXXXXXXXXXXXXIPE 204 + Q D + +++Q L+ T+ PI + Sbjct: 56353 V--AYSQERYDYVVRELQLLLKQTRIPEEAIIGFCPISGMTGVNITQRGAKETPWYHDLS 56526 Query: 205 LIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALKVV 264 LIE++ + + +R + P +S+ QGT + + SG + GD+V +V Sbjct: 56527 LIEMI-DKCPLESRLVNSPLRLSLQDV-----QGTTLYAKVESGRLFTGDTVHFVPSEVR 56688 Query: 265 KKVKSMQMFHM--PITSAMQGDRLGICVTQFDPKLLERGLVCAPESLHTVHAALISVEKI 322 VKS+Q + P+ A G+ + I L + C P L +H++ I Sbjct: 56689 VAVKSIQKPTVAGPVLVAFAGETVEISTNSSVTGLYPGCVGCEPNLL--IHSSTDFEAHI 56862 Query: 323 PYFR 326 FR Sbjct: 56863 QTFR 56874 >mex22g23.p1k Length = 1884 Score = 48.5 bits (114), Expect = 1e-05 Identities = 51/221 (23%), Positives = 83/221 (37%), Gaps = 12/221 (5%) Frame = +1 Query: 37 DKQPQSRERGITLDLGFSCFSVPLPARLRSSXXXXXXXXXXXXXXXXXXXQVTLVDCPGH 96 DK RERGIT+D+ F P T++D PGH Sbjct: 1186 DKLKAERERGITIDIALWKFESPKSV-------------------------FTIIDAPGH 1290 Query: 97 ASLIRTIIGGAQIIDLMMLVIDVTKG-------MQTQSAE-CLVIGQIACQKLVVVLNKI 148 I+ +I G D +L+ID T G Q+ E L+ + +++VV NK+ Sbjct: 1291 RDFIKNMITGTSQADAAILMIDSTHGGFEAGISKDGQTREHALLAFTLGVKQMVVCCNKM 1470 Query: 149 DLLPEGKRQAAIDKMTKKMQKTLENTKFRGAPI--IPVXXXXXXXXXXXXXXXXXI--PE 204 D Q+ D+++K++ L+ + + IP+ P Sbjct: 1471 DDKTVMYAQSRYDEISKEVSVYLKRVGYNPEKVRFIPISGWQGDNMIDKSDNMPWYKGPT 1650 Query: 205 LIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTI 245 L++ L + P R P + + + I G GTV G + Sbjct: 1651 LLDAL-DMLEPPVRPVDKPLRLPLQDVYKIGGIGTVPVGRV 1770 >mex309d24.q1k Length = 2140 Score = 48.1 bits (113), Expect = 2e-05 Identities = 26/73 (35%), Positives = 36/73 (49%) Frame = -2 Query: 232 FSIKGQGTVMTGTILSGSISLGDSVEIPALKVVKKVKSMQMFHMPITSAMQGDRLGICVT 291 + I G GTV G + +G + GD V V +VKS++M H + A GD +G V Sbjct: 2115 YKIGGIGTVPVGRVETGIMKPGDVVTFAPANVTTEVKSIEMHHEQLAEAQPGDNVGFNVK 1936 Query: 292 QFDPKLLERGLVC 304 K + RG VC Sbjct: 1935 NVSVKDIRRGNVC 1897 Score = 43.5 bits (101), Expect = 5e-04 Identities = 37/148 (25%), Positives = 60/148 (40%), Gaps = 8/148 (5%) Frame = -1 Query: 37 DKQPQSRERGITLDLGFSCFSVPLPARLRSSXXXXXXXXXXXXXXXXXXXQVTLVDCPGH 96 DK RERGIT+D+ F P T++D PGH Sbjct: 445 DKLKAERERGITIDIALWKFESPKSV-------------------------FTIIDAPGH 341 Query: 97 ASLIRTIIGGAQIIDLMMLVIDVTKG-------MQTQSAE-CLVIGQIACQKLVVVLNKI 148 I+ +I G D +L+ID T G Q+ E L+ + +++VV NK+ Sbjct: 340 RDFIKNMITGTSQADAAILMIDSTHGGFEAGISKDGQTREHALLAFTLGVKQMVVCCNKM 161 Query: 149 DLLPEGKRQAAIDKMTKKMQKTLENTKF 176 D Q+ D+++K++ L+ + Sbjct: 160 DDKTVMYAQSRYDEISKEVSAYLKRVGY 77 >mex469p04.p1k Length = 59646 Score = 45.8 bits (107), Expect = 9e-05 Identities = 50/244 (20%), Positives = 102/244 (41%), Gaps = 18/244 (7%) Frame = -1 Query: 87 QVTLVDCPGHASLIRTIIGGAQIIDLMMLVID---------VTKGMQTQSAECLVIGQIA 137 +VT++D PGH + + ++IGGA D+ +LVI KG QT+ +++ Sbjct: 22605 RVTVLDAPGHKAFVPSMIGGATQADICVLVISSRTGEFETGFEKGGQTRE-HAMLVRTCG 22429 Query: 138 CQKLVVVLNKIDLLPEGKRQ--AAIDKMTKKM-QKTLENTKFRGAPIIPVXXXXXXXXXX 194 ++++ V+NK+D + K + +D++ + Q + + + +PV Sbjct: 22428 VKQMICVINKMDEMKWSKERYNEIVDRLRPFLRQNGYDEERAKNLIFMPVAGLTGENLIK 22249 Query: 195 XXXXXXXI----PELIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSI 250 ++E++ ++ F + + + G+ T + G + SGSI Sbjct: 22248 HVEPSHCDWYKGKTMMEVIDDLKLPESKTEDDVFCIPLVGAYKDDGK-THIYGKVESGSI 22072 Query: 251 SLGDSVEIPALKVVKKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERGLVCA--PES 308 ++G+ +++ K V+ + + GD + I V D + G V P S Sbjct: 22071 AVGERIQVLPTKAEALVEGISIESTEFEKCYPGDNVHIHVRGIDENDIHGGYVATSIPTS 21892 Query: 309 LHTV 312 L V Sbjct: 21891 LRAV 21880 >mex435o22.q1k Length = 32145 Score = 45.8 bits (107), Expect = 9e-05 Identities = 23/65 (35%), Positives = 38/65 (58%) Frame = +3 Query: 89 TLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNKI 148 T +D PGH + T I D++ LVI V +G+ +Q+ E + + + ++VVLNK+ Sbjct: 28671 TFIDTPGHHIFVETRFHVQLIADVIALVISVAEGIGSQTHETIKVALNVDKPVIVVLNKL 28850 Query: 149 DLLPE 153 DLL + Sbjct: 28851 DLLSD 28865 >mex239b05.q1k Length = 1725 Score = 43.5 bits (101), Expect = 5e-04 Identities = 37/148 (25%), Positives = 60/148 (40%), Gaps = 8/148 (5%) Frame = +1 Query: 37 DKQPQSRERGITLDLGFSCFSVPLPARLRSSXXXXXXXXXXXXXXXXXXXQVTLVDCPGH 96 DK RERGIT+D+ F P T++D PGH Sbjct: 1228 DKLKAERERGITIDIALWKFESPKSV-------------------------FTIIDAPGH 1332 Query: 97 ASLIRTIIGGAQIIDLMMLVIDVTKG-------MQTQSAE-CLVIGQIACQKLVVVLNKI 148 I+ +I G D +L+ID T G Q+ E L+ + +++VV NK+ Sbjct: 1333 RDFIKNMITGTSQADAAILMIDSTHGGFEAGISKDGQTREHALLAFTLGVKQMVVCCNKM 1512 Query: 149 DLLPEGKRQAAIDKMTKKMQKTLENTKF 176 D Q+ D+++K++ L+ + Sbjct: 1513 DDKTVMYAQSRYDEISKEVSAYLKRVGY 1596 >mex339n17.q1k Length = 1171 Score = 43.5 bits (101), Expect = 5e-04 Identities = 37/148 (25%), Positives = 60/148 (40%), Gaps = 8/148 (5%) Frame = -3 Query: 37 DKQPQSRERGITLDLGFSCFSVPLPARLRSSXXXXXXXXXXXXXXXXXXXQVTLVDCPGH 96 DK RERGIT+D+ F P T++D PGH Sbjct: 509 DKLKAERERGITIDIALWKFESPKSV-------------------------FTIIDAPGH 405 Query: 97 ASLIRTIIGGAQIIDLMMLVIDVTKG-------MQTQSAE-CLVIGQIACQKLVVVLNKI 148 I+ +I G D +L+ID T G Q+ E L+ + +++VV NK+ Sbjct: 404 RDFIKNMITGTSQADAAILMIDSTHGGFEAGISKDGQTREHALLAFTLGVKQMVVCCNKM 225 Query: 149 DLLPEGKRQAAIDKMTKKMQKTLENTKF 176 D Q+ D+++K++ L+ + Sbjct: 224 DDKTVMYAQSRYDEISKEVSAYLKRVGY 141 >mex384f04.p1k Length = 1968 Score = 43.5 bits (101), Expect = 5e-04 Identities = 37/148 (25%), Positives = 60/148 (40%), Gaps = 8/148 (5%) Frame = -3 Query: 37 DKQPQSRERGITLDLGFSCFSVPLPARLRSSXXXXXXXXXXXXXXXXXXXQVTLVDCPGH 96 DK RERGIT+D+ F P T++D PGH Sbjct: 502 DKLKAERERGITIDIALWKFESPKSV-------------------------FTIIDAPGH 398 Query: 97 ASLIRTIIGGAQIIDLMMLVIDVTKG-------MQTQSAE-CLVIGQIACQKLVVVLNKI 148 I+ +I G D +L+ID T G Q+ E L+ + +++VV NK+ Sbjct: 397 RDFIKNMITGTSQADAAILMIDSTHGGFEAGISKDGQTREHALLAFTLGVKQMVVCCNKM 218 Query: 149 DLLPEGKRQAAIDKMTKKMQKTLENTKF 176 D Q+ D+++K++ L+ + Sbjct: 217 DDKTVMYAQSRYDEISKEVSAYLKRVGY 134 >mex378p04.q1k Length = 37120 Score = 42.7 bits (99), Expect = 8e-04 Identities = 23/88 (26%), Positives = 48/88 (54%), Gaps = 1/88 (1%) Frame = +1 Query: 90 LVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNKID 149 ++D PGH S G+ + D+ +LV+D+ G++ Q+ E + + + +V LNK+D Sbjct: 11200 VIDTPGHESFTNLRSRGSSLCDIAILVVDIMHGLEQQTRESIRLLREKRCPFIVALNKVD 11379 Query: 150 LLPEGKRQAAID-KMTKKMQKTLENTKF 176 L + + +D + + ++QK ++F Sbjct: 11380 RLFDWQPHENMDIQQSLELQKAHVRSEF 11463 >mex556b19.q1k Length = 15909 Score = 38.1 bits (87), Expect = 0.019 Identities = 25/86 (29%), Positives = 33/86 (38%) Frame = +1 Query: 37 DKQPQSRERGITLDLGFSCFSVPLPARLRSSXXXXXXXXXXXXXXXXXXXQVTLVDCPGH 96 DK RERGIT+D+ F P T++D PGH Sbjct: 15685 DKLKAERERGITIDIALWKFESPKSV-------------------------FTIIDAPGH 15789 Query: 97 ASLIRTIIGGAQIIDLMMLVIDVTKG 122 I+ +I G D +L+ID T G Sbjct: 15790 RDFIKNMITGTSQADAAILMIDSTHG 15867 >1036_mexFOS1_35k08.p1kpIBF Length = 103920 Score = 37.7 bits (86), Expect = 0.025 Identities = 22/72 (30%), Positives = 36/72 (50%) Frame = -2 Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNK 147 + LVD PGH + ++ D ++++DV G+ Q+A L + +VLNK Sbjct: 87785 LNLVDSPGHIDFSCEVSTAMRLCDGAVVIVDVVDGVTQQTASILRHTYQEGLSMCLVLNK 87606 Query: 148 IDLLPEGKRQAA 159 IDLL ++ A Sbjct: 87605 IDLLVTTQQNTA 87570 >mex308d23.q1k Length = 17553 Score = 37.4 bits (85), Expect = 0.032 Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 1/66 (1%) Frame = -1 Query: 87 QVTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQ-KLVVVL 145 Q+T++D PGH LI G ++ D ++ +D + + S L + Q +V+V+ Sbjct: 16815 QITVIDTPGHPDLIGETASGMRLADAVLFCVDAAESLSDHSERLLRHAIVNEQLPIVLVI 16636 Query: 146 NKIDLL 151 K+D L Sbjct: 16635 TKVDRL 16618 >mex259m22.p1k Length = 45004 Score = 34.7 bits (78), Expect = 0.21 Identities = 17/62 (27%), Positives = 31/62 (50%) Frame = +2 Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNK 147 + L+D PGH + +++D ++ + D + G+Q QS L + L+ LNK Sbjct: 31871 INLIDTPGHVDFTVEVERTMRVVDGVVALFDASAGVQAQSYTVLQQSRKFNAPLIAFLNK 32050 Query: 148 ID 149 +D Sbjct: 32051 MD 32056 >mex315k04.p1k Length = 197933 Score = 33.9 bits (76), Expect = 0.36 Identities = 16/62 (25%), Positives = 30/62 (48%) Frame = -2 Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNK 147 + L+D PGH + ++ D ++V+D +G+ Q+ L + VV +NK Sbjct: 42853 INLIDSPGHVDFSSEVTAALRVTDGALVVVDCVEGVCVQTETVLRQALTERIRPVVFINK 42674 Query: 148 ID 149 +D Sbjct: 42673 VD 42668 >mex469n10.q1k Length = 29490 Score = 32.3 bits (72), Expect = 1.0 Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 3/81 (3%) Frame = +1 Query: 395 DKKAGQATEGHCPRQ-QWALVEFEKPVTCPRLCLVIGSRL--DADIHTNTCRLAFHGILL 451 D K+ +A+E HC QW E P++ ++G R +AD HTNT + + L Sbjct: 10885 DCKSVRASETHCHTPAQWPRTSQEVPLS------ILGPRTGQEADAHTNTAHVPLVALQL 11046 Query: 452 HGLEDRNYADSFLPRLKVYKL 472 H R + LPR + L Sbjct: 11047 H---PRRLGQTVLPRNRAIHL 11100 >mex99h04.q1k Length = 93031 Score = 32.0 bits (71), Expect = 1.4 Identities = 27/94 (28%), Positives = 39/94 (41%), Gaps = 3/94 (3%) Frame = -2 Query: 490 GRSLFKKETNIQLFVGLK---VHLSTGELGIIDSAFGQSGKFKIHIPGGLSPESKKILTP 546 GRS +K + +FVG + ++ +LG G +G K T Sbjct: 42567 GRSAEEKTHKLIIFVGKLLD*IQMTRNKLGGDTQYAGDTG-------------DKNTTTQ 42427 Query: 547 ALKKRARAGRGEATRQEESAERSEPSQHVVLSLT 580 A K R GRGE TR +R+ PSQ + + T Sbjct: 42426 AKKGREGKGRGEHTRHGRVGQRNRPSQSLTCAPT 42325 >mex106a04.p1k Length = 259109 Score = 31.2 bits (69), Expect = 2.3 Identities = 16/42 (38%), Positives = 24/42 (57%) Frame = +1 Query: 543 ILTPALKKRARAGRGEATRQEESAERSEPSQHVVLSLTFKRY 584 ++ PA RAR GRGEA +E++ + S VV ++ RY Sbjct: 104278 VMPPAHTTRARRGRGEAVLEEQADDMVTQSTLVVAAVAALRY 104403 >mex379f12.p1k Length = 19204 Score = 31.2 bits (69), Expect = 2.3 Identities = 11/22 (50%), Positives = 16/22 (72%) Frame = -2 Query: 422 CPRLCLVIGSRLDADIHTNTCR 443 C LCL++ + L +D+HT TCR Sbjct: 1113 CRPLCLLLSTSLSSDMHTRTCR 1048 >mex131d09.p1k Length = 108110 Score = 30.4 bits (67), Expect = 3.9 Identities = 17/51 (33%), Positives = 26/51 (50%) Frame = +3 Query: 202 IPELIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISL 252 +P L+ LL S + P+R+P L HC S++ TGT+L + L Sbjct: 95802 LPTLLLLLLSWLPCPSRNPP---LWRHSHCRSLRHANAPATGTVLPHHVEL 95945 Score = 29.6 bits (65), Expect = 6.7 Identities = 18/56 (32%), Positives = 28/56 (50%) Frame = -1 Query: 540 SKKILTPALKKRARAGRGEATRQEESAERSEPSQHVVLSLTFKRYVFDTHKRMVQS 595 S+K PA ++ R GRG +Q E+A +PS H+ +RY +R V + Sbjct: 1268 SRKGEKPARERAQRGGRGSC-KQSEAASILQPSAHLAFGRAGQRYKK*RRRRRVSN 1104 >mex380f18.p1k Length = 169514 Score = 29.6 bits (65), Expect = 6.7 Identities = 16/34 (47%), Positives = 18/34 (52%) Frame = +1 Query: 546 PALKKRARAGRGEATRQEESAERSEPSQHVVLSL 579 P L+ R RA R R S E +PSQ VLSL Sbjct: 113281 PLLRVRLRAARSPRARARASTEARQPSQARVLSL 113382 Database: genome.fa Posted date: Jan 16, 2009 12:51 PM Number of letters in database: 31,706,682 Number of sequences in database: 1696 Lambda K H 0.321 0.137 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 20,925,275 Number of Sequences: 1696 Number of extensions: 327418 Number of successful extensions: 1812 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 143 Number of HSP's successfully gapped in prelim test: 48 Number of HSP's that attempted gapping in prelim test: 1549 Number of HSP's gapped (non-prelim): 477 length of query: 596 length of database: 10,568,894 effective HSP length: 106 effective length of query: 490 effective length of database: 10,389,118 effective search space: 5090667820 effective search space used: 5090667820 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 64 (29.3 bits)