TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SPP00000092_1.0 # Protein # Eukaryotic elongation factor (eEFSec) # Drosophila melanogaster # Complete (511 letters) Database: genome.fa 2172 sequences; 20,771,095 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAFB02000159.1| Entamoeba histolytica HM-1:IMSS gcontig_11047... 90 2e-18 gb|AAFB02000671.1| Entamoeba histolytica HM-1:IMSS gcontig_11047... 90 3e-18 gb|AAFB02000354.1| Entamoeba histolytica HM-1:IMSS gcontig_11047... 90 3e-18 gb|AAFB02000464.1| Entamoeba histolytica HM-1:IMSS gcontig_11047... 75 6e-14 gb|AAFB02000260.1| Entamoeba histolytica HM-1:IMSS gcontig_11047... 54 2e-07 gb|AAFB02000521.1| Entamoeba histolytica HM-1:IMSS gcontig_11047... 50 3e-06 gb|AAFB02000115.1| Entamoeba histolytica HM-1:IMSS gcontig_11047... 50 3e-06 gb|AAFB02000105.1| Entamoeba histolytica HM-1:IMSS gcontig_11047... 50 3e-06 gb|AAFB02000008.1| Entamoeba histolytica HM-1:IMSS gcontig_11047... 46 4e-05 gb|AAFB02000005.1| Entamoeba histolytica HM-1:IMSS gcontig_11047... 45 1e-04 gb|AAFB02000374.1| Entamoeba histolytica HM-1:IMSS gcontig_11047... 43 3e-04 gb|AAFB02000222.1| Entamoeba histolytica HM-1:IMSS gcontig_11047... 42 5e-04 gb|AAFB02000208.1| Entamoeba histolytica HM-1:IMSS gcontig_11047... 42 5e-04 gb|AAFB02000287.1| Entamoeba histolytica HM-1:IMSS gcontig_11047... 32 0.73 gb|AAFB02000157.1| Entamoeba histolytica HM-1:IMSS gcontig_11047... 29 4.7 >gb|AAFB02000159.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750513490, whole genome shotgun sequence Length = 33909 Score = 90.1 bits (222), Expect = 2e-18 Identities = 78/324 (24%), Positives = 134/324 (41%), Gaps = 44/324 (13%) Frame = +3 Query: 4 NFNIGLLGHVDSGKTTLAKAL------------------------SSISSTAAFDKNPQS 39 + NI ++GHVDSGK+T L S D Sbjct: 13497 HINIVVIGHVDSGKSTTTGHLIYKCGGIDQRTIEKFEKESAEMGKGSFKYAWVLDNLKAE 13676 Query: 40 VERGITLDLGFSGLLVDAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVD 99 ERGIT+D+ + + FT +D PGH I+ +I G D+ +L+V Sbjct: 13677 RERGITIDISLWKF---------ETSKYYFTIIDAPGHRDFIKNMITGTSQADVAILIVA 13829 Query: 100 AQKG-------KQTQTAECLIIGELLQ-KKLIVVINKIDVYPENQRASKLEKLRLRLAKT 151 A G K QT E +++ L K++IV +NK+D Q + E+++ ++ Sbjct: 13830 AGTGEFEAGISKNGQTREHILLSYTLGVKQMIVGVNKMDAIQYKQE--RYEEIKKEISAF 14003 Query: 152 LEATTFG-GQVPICAVSALQGTHIAELREVLR-----------EAYFQPQRNLADPLFMY 199 L+ T + ++P +S QG ++ E + ++ P+R + PL + Sbjct: 14004 LKKTGYNPDKIPFVPISGFQGDNMIEPSTNMPWYKGPTLIGALDSVTPPERPVDKPLRLP 14183 Query: 200 VDHCFGIKGQGTVCTGTLLQGKVQVNNVIELPALGEQRKVKSIQMFRKNVTSASMGDRIG 259 + + I G GTV G + G ++ +++ G + KSI+M + A GD +G Sbjct: 14184 LQDVYKISGIGTVPVGRVETGILKPGTIVQFAPSGVSSECKSIEMHHTALAQAIPGDNVG 14363 Query: 260 LCVTQFNAKLLERGIITQPGYLKP 283 V K ++RG + +P Sbjct: 14364 FNVRNLTVKDIKRGNVASDAKNQP 14435 >gb|AAFB02000671.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750515481, whole genome shotgun sequence Length = 6812 Score = 89.7 bits (221), Expect = 3e-18 Identities = 77/324 (23%), Positives = 134/324 (41%), Gaps = 44/324 (13%) Frame = +3 Query: 4 NFNIGLLGHVDSGKTTLAKAL------------------------SSISSTAAFDKNPQS 39 + NI ++GHVDSGK+T L S D Sbjct: 4113 HINIVVIGHVDSGKSTTTGHLIYKCGGIDQRTIEKFEKESAEMGKGSFKYAWVLDNLKAE 4292 Query: 40 VERGITLDLGFSGLLVDAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVD 99 ERGIT+D+ + + FT +D PGH I+ +I G D+ +L+V Sbjct: 4293 RERGITIDISLWKF---------ETSKYYFTIIDAPGHRDFIKNMITGTSQADVAILIVA 4445 Query: 100 AQKG-------KQTQTAECLIIGELLQ-KKLIVVINKIDVYPENQRASKLEKLRLRLAKT 151 A G K QT E +++ L K++IV +NK+D Q + E+++ ++ Sbjct: 4446 AGTGEFEAGISKNGQTREHILLSYTLGVKQMIVGVNKMDAIQYKQE--RYEEIKKEISAF 4619 Query: 152 LEATTFG-GQVPICAVSALQGTHIAELREVLR-----------EAYFQPQRNLADPLFMY 199 L+ T + ++P +S QG ++ E + ++ P+R + PL + Sbjct: 4620 LKKTGYNPDKIPFVPISGFQGDNMIEPSTNMPWYKGPTLIGALDSVTPPERPVDKPLRLP 4799 Query: 200 VDHCFGIKGQGTVCTGTLLQGKVQVNNVIELPALGEQRKVKSIQMFRKNVTSASMGDRIG 259 + + I G GTV G + G ++ +++ G + KS++M + A GD +G Sbjct: 4800 LQDVYKISGIGTVPCGRVETGVLRPGTIVQFAPSGVSSECKSVEMHHTALAQAIPGDNVG 4979 Query: 260 LCVTQFNAKLLERGIITQPGYLKP 283 V K ++RG + +P Sbjct: 4980 FNVRNLTVKDIKRGNVASDAKNQP 5051 >gb|AAFB02000354.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750507676, whole genome shotgun sequence Length = 16484 Score = 89.7 bits (221), Expect = 3e-18 Identities = 77/324 (23%), Positives = 134/324 (41%), Gaps = 44/324 (13%) Frame = -3 Query: 4 NFNIGLLGHVDSGKTTLAKAL------------------------SSISSTAAFDKNPQS 39 + NI ++GHVDSGK+T L S D Sbjct: 4293 HINIVVIGHVDSGKSTTTGHLIYKCGGIDQRTIEKFEKESAEMGKGSFKYAWVLDNLKAE 4114 Query: 40 VERGITLDLGFSGLLVDAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVD 99 ERGIT+D+ + + FT +D PGH I+ +I G D+ +L+V Sbjct: 4113 RERGITIDISLWKF---------ETSKYYFTIIDAPGHRDFIKNMITGTSQADVAILIVA 3961 Query: 100 AQKG-------KQTQTAECLIIGELLQ-KKLIVVINKIDVYPENQRASKLEKLRLRLAKT 151 A G K QT E +++ L K++IV +NK+D Q + E+++ ++ Sbjct: 3960 AGTGEFEAGISKNGQTREHILLSYTLGVKQMIVGVNKMDAIQYKQE--RYEEIKKEISAF 3787 Query: 152 LEATTFG-GQVPICAVSALQGTHIAELREVLR-----------EAYFQPQRNLADPLFMY 199 L+ T + ++P +S QG ++ E + ++ P+R + PL + Sbjct: 3786 LKKTGYNPDKIPFVPISGFQGDNMIEPSTNMPWYKGPTLIGALDSVTPPERPVDKPLRLP 3607 Query: 200 VDHCFGIKGQGTVCTGTLLQGKVQVNNVIELPALGEQRKVKSIQMFRKNVTSASMGDRIG 259 + + I G GTV G + G ++ +++ G + KS++M + A GD +G Sbjct: 3606 LQDVYKISGIGTVPCGRVETGVLRPGTIVQFAPSGVSSECKSVEMHHTALAQAIPGDNVG 3427 Query: 260 LCVTQFNAKLLERGIITQPGYLKP 283 V K ++RG + +P Sbjct: 3426 FNVRNLTVKDIKRGNVASDAKNQP 3355 >gb|AAFB02000464.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750512546, whole genome shotgun sequence Length = 11924 Score = 75.5 bits (184), Expect = 6e-14 Identities = 73/263 (27%), Positives = 120/263 (45%), Gaps = 38/263 (14%) Frame = -3 Query: 6 NIGLLGHVDSGKTTLAKALSSISSTAAFDKNPQSVERGITLDLGFSGLLV---------- 55 NIG +GHV GK+T+ KALS + + K + +++ +T+ LG++ + Sbjct: 10764 NIGTIGHVAHGKSTVVKALSGVHTV----KFREELKKNMTIRLGYANAKIYKCTNPNCPK 10597 Query: 56 ------------DAP-AHLPQ-GEQLQF----TFVDCPGHASLIRTIIGGAQIIDLMLLV 97 D P +P G ++Q +FVDCPGH SL+ T++ G ++D LL+ Sbjct: 10596 PGCYRSYGSAKEDNPICEVPGCGHKMQLLRHVSFVDCPGHDSLMMTMLTGTAVMDGALLL 10417 Query: 98 VDAQKG-KQTQTAECLIIGELLQ-KKLIVVINKIDVYPENQRASKLEKLRLRLAKTLEAT 155 V K Q QT+E L E ++ K +I++ NKID+ + A K + K Sbjct: 10416 VAGNKPCPQPQTSEHLAAVEFMKLKHMIILQNKIDLVKTKEDAQK----NYQQIKEFVKG 10249 Query: 156 TFGGQVPICAVSALQGTHIAELREVLREAYFQPQRNLADPLFMYVDHCFGIKGQGT---- 211 + PI + A ++ + E + + PQR+ M + F I GT Sbjct: 10248 SIAENAPIIPICAQLKYNMDVVCEYICHSIPVPQRDFKVNPRMTIIRSFDINKPGTLPQD 10069 Query: 212 ----VCTGTLLQGKVQVNNVIEL 230 V GTL QG +++ + IE+ Sbjct: 10068 LIGGVIGGTLSQGMLKLGDEIEI 10000 >gb|AAFB02000260.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750513572, whole genome shotgun sequence Length = 22950 Score = 53.9 bits (128), Expect = 2e-07 Identities = 73/318 (22%), Positives = 127/318 (39%), Gaps = 48/318 (15%) Frame = +1 Query: 6 NIGLLGHVDSGKTTLAKALSSISSTA------AFDKNPQSVER-----GITLDL----GF 50 NI +GHVD+GK+T + + S F+K + +R +D Sbjct: 14317 NIIFIGHVDAGKSTTSGNILFQSGNIEQRIIDKFEKEAKENQRESWWLAYIMDQIEEEKS 14496 Query: 51 SGLLVDAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKG------- 103 G+ +D L + E+ ++T +D PGH S + +I A D+ +L+V A+KG Sbjct: 14497 KGITIDVGRALFETEKRRYTILDAPGHRSFVPNMISAAAQADIAVLIVSARKGEFETGFD 14676 Query: 104 KQTQTAE----CLIIGELLQKKLIVVINKIDVYPENQRASKLEKLRLRLAKTLEATTFGG 159 K QT E C G K +I+ +NK+D S+ +++ ++ L F Sbjct: 14677 KGGQTREHSQLCRTAG---VKTVIIAVNKMDEKTVGWEKSRYDEIVNKVKPFLRQCGFSD 14847 Query: 160 --QVPICAVSAL--------------QGTHIAELREVLREAYFQPQRNLADPLFMYVDHC 203 +PI S L G + EL + ++ P + P+ +D Sbjct: 14848 IYSIPISGFSGLNLTKRLDKGVCSWYDGPCLVELLDSIKLVMGNPNGPIRMPI---IDKF 15018 Query: 204 FGIKG----QGTVCTGTLLQGK--VQVNNVIELPALGEQRKVKSIQMFRKNVTSASMGDR 257 KG G V +GT+ +G V + N ++L G S+ + A GD Sbjct: 15019 KDGKGNSVIMGKVESGTIYKGSKCVVMPNKVDLEVTGITYDENSVP-----ASKARPGDN 15183 Query: 258 IGLCVTQFNAKLLERGII 275 + + + A ++ G + Sbjct: 15184 VRIQMKGDQADSIQTGFV 15237 >gb|AAFB02000521.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750512674, whole genome shotgun sequence Length = 10182 Score = 50.1 bits (118), Expect = 3e-06 Identities = 39/140 (27%), Positives = 60/140 (42%), Gaps = 15/140 (10%) Frame = -1 Query: 6 NIGLLGHVDSGKTTLAKALSSISSTAAFDK---------NPQSVERGITLDLGFSGLLV- 55 N+ ++ HVD GK+TL +L +++ + +K P ER IT+ + Sbjct: 4716 NMCVIAHVDHGKSTLTDSLVTLAGIISNEKAGVARYTDTRPDEQERCITIKSTSISMYYE 4537 Query: 56 -----DAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAE 110 D PA G +D PGH + ++ D L+VVD +G QT Sbjct: 4536 IEDKEDIPADA-NGNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVEGVCVQTET 4360 Query: 111 CLIIGELLQKKLIVVINKID 130 L + K IV+INK+D Sbjct: 4359 VLRQALTERVKPIVIINKVD 4300 >gb|AAFB02000115.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750510372, whole genome shotgun sequence Length = 41185 Score = 50.1 bits (118), Expect = 3e-06 Identities = 39/140 (27%), Positives = 60/140 (42%), Gaps = 15/140 (10%) Frame = +3 Query: 6 NIGLLGHVDSGKTTLAKALSSISSTAAFDK---------NPQSVERGITLDLGFSGLLV- 55 N+ ++ HVD GK+TL +L +++ + +K P ER IT+ + Sbjct: 15525 NMCVIAHVDHGKSTLTDSLVTLAGIISNEKAGVARYTDTRPDEQERCITIKSTSISMYYE 15704 Query: 56 -----DAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAE 110 D PA G +D PGH + ++ D L+VVD +G QT Sbjct: 15705 IEDKEDIPADA-NGNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVEGVCVQTET 15881 Query: 111 CLIIGELLQKKLIVVINKID 130 L + K IV+INK+D Sbjct: 15882 VLRQALTERVKPIVIINKVD 15941 >gb|AAFB02000105.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750513086, whole genome shotgun sequence Length = 43065 Score = 50.1 bits (118), Expect = 3e-06 Identities = 39/140 (27%), Positives = 60/140 (42%), Gaps = 15/140 (10%) Frame = +1 Query: 6 NIGLLGHVDSGKTTLAKALSSISSTAAFDK---------NPQSVERGITLDLGFSGLLV- 55 N+ ++ HVD GK+TL +L +++ + +K P ER IT+ + Sbjct: 6193 NMCVIAHVDHGKSTLTDSLVTLAGIISNEKAGVARYTDTRPDEQERCITIKSTSISMYYE 6372 Query: 56 -----DAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAE 110 D PA G +D PGH + ++ D L+VVD +G QT Sbjct: 6373 IEDKEDIPADA-NGNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVEGVCVQTET 6549 Query: 111 CLIIGELLQKKLIVVINKID 130 L + K IV+INK+D Sbjct: 6550 VLRQALTERVKPIVIINKVD 6609 >gb|AAFB02000008.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750512822, whole genome shotgun sequence Length = 118116 Score = 46.2 bits (108), Expect = 4e-05 Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 10/132 (7%) Frame = +2 Query: 9 LLGHVDSGKTTLAKALSSISSTAAFDKNPQSVERG-ITLDLGFSGLLVDAPAHLPQG--- 64 +LGHVD+GKT K L + T N Q E G IT +G + +D+ + + Sbjct: 87860 VLGHVDTGKT---KILDRMRRT-----NVQRGEAGGITQQIGSTFFPLDSIEKMTEKMKD 88015 Query: 65 -EQLQFTF-----VDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGELL 118 +L+F +D PGH + G + D+ +LVVD G + QT E + + + Sbjct: 88016 KTKLKFKIPGLLVMDTPGHEAFNNLRSRGTSLCDIAVLVVDLMHGLEPQTIESINLLKQK 88195 Query: 119 QKKLIVVINKID 130 +V +NKID Sbjct: 88196 NTPFVVALNKID 88231 >gb|AAFB02000005.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750512920, whole genome shotgun sequence Length = 129391 Score = 44.7 bits (104), Expect = 1e-04 Identities = 43/137 (31%), Positives = 58/137 (42%), Gaps = 12/137 (8%) Frame = +3 Query: 6 NIGLLGHVDSGKTTLAKALSSISSTAA---------FDKNPQSVERGITLDLGFSGLLVD 56 NI +L HVD GKT++ AL + + + D R IT+ L Sbjct: 100269 NICVLAHVDHGKTSICDALIASNGIISKKLSGKVRYLDYRDDEQVRQITMKTSSISLYTQ 100448 Query: 57 APAHLPQGEQLQF-TFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKG--KQTQTAECLI 113 G+Q VD PGH + ++ D LLVVD +G QTQT Sbjct: 100449 L------GDQHHLLNLVDSPGHVDFSGEVSSAVRLTDGALLVVDCIEGVCVQTQTVLRQA 100610 Query: 114 IGELLQKKLIVVINKID 130 E LQ +I++INKID Sbjct: 100611 ASEGLQ--MILIINKID 100655 >gb|AAFB02000374.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750504755, whole genome shotgun sequence Length = 15600 Score = 43.1 bits (100), Expect = 3e-04 Identities = 67/321 (20%), Positives = 110/321 (34%), Gaps = 46/321 (14%) Frame = -3 Query: 11 GHVDSGKTTLA------------------------KALSSISSTAAFDKNPQSVERGITL 46 GHVDSGK+T K S D + + RGIT+ Sbjct: 12691 GHVDSGKSTTVGHILQELGGVTHSQIEKNKKECGEKGKKSFEYAWVMDTDDEERNRGITI 12512 Query: 47 DLGFSGLLVDAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQT 106 +G Q +D PGH + I D+ ++VVD K Sbjct: 12511 SVGAVEF---------QYNHKNIRILDAPGHTDFLMKTIDAMNEADVAVVVVDVDK---- 12371 Query: 107 QTAECLIIGELLQ----------KKLIVVINKID-VYPENQRASKLEKLRLRLAKTLEAT 155 +C G L K+IV INK+D V + + + L K Sbjct: 12370 HNLKCTYEGTFLDIVSTLAYSTVSKIIVAINKMDSVKWSESKYKSVVSVAEELLKEYNLD 12191 Query: 156 TFGGQVPICAVSALQGTHIAE-----------LREVLREAYFQPQRNLADPLFMYVDHCF 204 + +S L G ++ + L V+ E Q ++ PL + + Sbjct: 12190 NI--NIRYIPISGLSGENLIKPTTSCKWCQESLLSVISEESAQ-FHDIEKPLRFICNDSY 12020 Query: 205 GIKGQGTVCTGTLLQGKVQVNNVIELPALGEQRKVKSIQMFRKNVTSASMGDRIGLCVTQ 264 +G G+V TG + G + + + + +K I+ + + A GD + + V Sbjct: 12019 K-QGNGSVITGIISSGVIGEKDDVIIYPTQTHGVIKKIKKGNQIIDCAGAGDIVEIQVDG 11843 Query: 265 FNAKLLERGIITQPGYLKPIY 285 N +++ +I P PIY Sbjct: 11842 TNLNIMKGYVIGSPAE-PPIY 11783 >gb|AAFB02000222.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750516029, whole genome shotgun sequence Length = 25673 Score = 42.4 bits (98), Expect = 5e-04 Identities = 33/133 (24%), Positives = 58/133 (43%), Gaps = 8/133 (6%) Frame = -1 Query: 6 NIGLLGHVDSGKTTLAKALSSISSTAAFDKNP--------QSVERGITLDLGFSGLLVDA 57 NI ++G + GKT L L S + D + ++ E+ + + + S + + Sbjct: 25253 NIAVIGSLHHGKTQLIDLLFRYSHDKSIDVDKITTNYMDIRNDEQELKISIKSSQISLCI 25074 Query: 58 PAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGEL 117 P+ + +D PGH+ I +I G + D +++ +D +G T + I Sbjct: 25073 PSK--KNGYYLCNIIDTPGHSDFIDEVIVGLSLADNVIITIDCAEGVLLTTKHLIEIVAQ 24900 Query: 118 LQKKLIVVINKID 130 LIVVI KID Sbjct: 24899 QHLPLIVVITKID 24861 >gb|AAFB02000208.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750516149, whole genome shotgun sequence Length = 27765 Score = 42.4 bits (98), Expect = 5e-04 Identities = 33/133 (24%), Positives = 58/133 (43%), Gaps = 8/133 (6%) Frame = -3 Query: 6 NIGLLGHVDSGKTTLAKALSSISSTAAFDKNP--------QSVERGITLDLGFSGLLVDA 57 NI ++G + GKT L L S + D + ++ E+ + + + S + + Sbjct: 10981 NIAVIGSLHHGKTQLIDLLFRYSHDKSIDVDKITTNYMDIRNDEQELKISIKSSQISLCI 10802 Query: 58 PAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGEL 117 P+ + +D PGH+ I +I G + D +++ +D +G T + I Sbjct: 10801 PSK--KNGYYLCNIIDTPGHSDFIDEVIVGLSLADNVIITIDCAEGVLLTTKHLIEIVAQ 10628 Query: 118 LQKKLIVVINKID 130 LIVVI KID Sbjct: 10627 QHLPLIVVITKID 10589 >gb|AAFB02000287.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750507108, whole genome shotgun sequence Length = 21019 Score = 32.0 bits (71), Expect = 0.73 Identities = 33/127 (25%), Positives = 50/127 (39%), Gaps = 7/127 (5%) Frame = +1 Query: 209 QGTVC--TGTLLQGKVQVNNVIELPALGEQRKVKSIQMFRKNVTSASMGDRIGLCVTQFN 266 QG VC TG GK V+N + + L +Q + I + ++ ++ +G N Sbjct: 3466 QGLVCFFTGLSGSGKSVVSNAV-IERL-KQHTNRPIYLLDGDIVRTNLSSELGFSKAHRN 3639 Query: 267 AKLLERGIITQPGYLKPIYAVCLQFKPIRYYKEVIKSMRKMHISVG-----HNTVMANVT 321 +L G + VC PI Y+E+ +RKM G HN +V Sbjct: 3640 INILRIGFVASLLARSGAIVVCA---PIAPYREIRDEVRKMVSQYGNFVEIHNATPISVC 3810 Query: 322 LFRDTDG 328 RD G Sbjct: 3811 EERDRKG 3831 >gb|AAFB02000157.1| Entamoeba histolytica HM-1:IMSS gcontig_1104750515059, whole genome shotgun sequence Length = 34310 Score = 29.3 bits (64), Expect = 4.7 Identities = 55/238 (23%), Positives = 84/238 (35%), Gaps = 58/238 (24%) Frame = +1 Query: 4 NFNIGLLGHVDSGKTTLAKALSSISSTAAFDKNPQSVERGITLD---------------- 47 + N+ L+G SGKTTL L+ + + +P + + D Sbjct: 31708 SINVILVGMAGSGKTTLMSILAEKTDAYLINLDPACNDPPYSPDIDIRDTVNYKEVMKDY 31887 Query: 48 -LGFSGLL----------VDAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIID---- 92 LG +G + VD + Q +Q Q TF+D PG + G I + Sbjct: 31888 GLGPNGAIVTSLNLYSTKVDQLVTVLQNKQ-QLTFIDTPGQIEVFTWSASGQVISEALSI 32064 Query: 93 ----LMLLVVDAQK---GKQTQTAECLIIGELLQK---KLIVVINKIDVYP--------- 133 + L VVD + T A +L K LI+V K DV P Sbjct: 32065 VAPTIYLYVVDTARCVENPNTFMANMTYACSILYKTKLPLIIVFTKTDVIPCTKLNQWMD 32244 Query: 134 --------ENQRASKLEKLRLRLAKTLEATTFGGQVPICAVSALQGTHIAELREVLRE 183 N+ S L+ L L+ F + C VS+ G + +L E ++E Sbjct: 32245 DYDNYLDALNETESYASDLQRSLCLALD--DFYKNILHCGVSSKTGEGVDKLLECIQE 32412 Database: genome.fa Posted date: Jan 19, 2010 5:04 PM Number of letters in database: 20,771,095 Number of sequences in database: 2172 Lambda K H 0.320 0.136 0.388 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 8,429,598 Number of Sequences: 2172 Number of extensions: 101008 Number of successful extensions: 432 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 75 Number of HSP's successfully gapped in prelim test: 15 Number of HSP's that attempted gapping in prelim test: 323 Number of HSP's gapped (non-prelim): 136 length of query: 511 length of database: 6,923,698 effective HSP length: 101 effective length of query: 410 effective length of database: 6,704,326 effective search space: 2748773660 effective search space used: 2748773660 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 61 (28.1 bits)