TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SPP00000092_1.0 # Protein # Eukaryotic elongation factor (eEFSec) # Drosophila melanogaster # Complete (511 letters) Database: genome.fa 799 sequences; 32,967,507 total letters Searching.....................................................done Score E Sequences producing significant alignments: (bits) Value scaffold_198 217 2e-95 scaffold_25 90 5e-18 scaffold_265 74 4e-13 scaffold_6 62 8e-10 scaffold_479 58 2e-08 scaffold_19 57 4e-08 scaffold_192 54 4e-07 scaffold_168 52 8e-07 scaffold_337 50 5e-06 scaffold_516 49 1e-05 scaffold_39 47 3e-05 scaffold_140 45 2e-04 scaffold_413 41 0.003 scaffold_272 38 0.016 scaffold_202 35 0.18 scaffold_285 31 2.6 scaffold_75 31 2.6 scaffold_222 30 5.9 scaffold_336 29 10.0 scaffold_60 29 10.0 >scaffold_198 Length = 58540 Score = 217 bits (553), Expect(3) = 2e-95 Identities = 125/349 (35%), Positives = 190/349 (54%), Gaps = 31/349 (8%) Frame = -3 Query: 111 CLIIGELLQKKLIVVINKIDVYPENQRASKLEKLRLRLAKTLEATTFGGQVPICAVSALQ 170 C++IGE+ KK I+++NKID P R K+E + +L K LE T F + PI SA Sbjct: 13526 CIVIGEITCKKGIIILNKIDQIPIENRNEKIESVSGKLRKALEKTCFK-ESPIVPFSANP 13350 Query: 171 GTH--------------------IAELREVLREAYFQPQRNLADPLFMYVDHCFGIKGQG 210 + + EL + L + P+R L DHCF IKGQG Sbjct: 13349 SDNNNNNNNSDNNDDNNIAKPIGLNELYKELNKYLVVPKREEKGDLLFEFDHCFQIKGQG 13170 Query: 211 TVCTGTLLQGKVQVNNVIELPALGEQRKVKSIQMFRKNVTSASMGDRIGLCVTQFNAKLL 270 +V TGT+L+G ++VN I++P L ++KVKS+QMF K + A GDR+G+CVTQ ++KLL Sbjct: 13169 SVLTGTILRGTIEVNQTIQIPQLNLEKKVKSMQMFHKPIKKAIQGDRVGVCVTQLDSKLL 12990 Query: 271 ERGIITQPGYLKPIYAVCLQFKPIRYYKEVIKSMRKMHISVGHNTVMANVTLFR------ 324 ERG++ + + + + + +R+YK + + K HI++GH+TV+A++T F Sbjct: 12989 ERGLVCSNNSIPSLSSALISIEKVRFYKSEVHTKSKFHITIGHSTVIASLTYFSAIVPNS 12810 Query: 325 ---DTDGTTSTFQLDKEYEYMEDVQPAEVQHN-DVIYALLQFESPVLSPPHSTLIASKLD 380 D STF EY Y + + + +AL++F+ P+L P +S +I SKLD Sbjct: 12809 NNGSGDNNNSTFNYSNEYIYQDTLNATSPEFPVGSQFALIKFDHPILCPLNSVIIGSKLD 12630 Query: 381 MDVHSTSCRLAFWGR-IAWQTHSSKYFQEELPKLRIFKRKQKVGSIQRV 428 + ST CR+AF G I S ++ L KL+I+K K K G ++RV Sbjct: 12629 VSTDSTGCRIAFHGTLIEGVDDKSPNSKQSLSKLKIYKTKSKQGQVERV 12483 Score = 134 bits (338), Expect(3) = 2e-95 Identities = 73/124 (58%), Positives = 89/124 (71%), Gaps = 15/124 (12%) Frame = -1 Query: 2 PINFNIGLLGHVDSGKTTLAKALSSISSTAAFDKNPQSVERGITLDLGFSG------LLV 55 PIN NIG++GH+DSGKT+LAKALS+ STA+ DK+P+S RGITLDLGFS LL Sbjct: 13969 PININIGIMGHIDSGKTSLAKALSTNLSTASLDKSPESRMRGITLDLGFSSFQLNRELLN 13790 Query: 56 DAPAH---------LPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQT 106 +A + + + +Q T VDCPGHASLIRTIIGG+QIID+M LV+D KG QT Sbjct: 13789 NAIGNDESSSWGNKIDNNQNIQITLVDCPGHASLIRTIIGGSQIIDMMFLVIDINKGIQT 13610 Query: 107 QTAE 110 QTAE Sbjct: 13609 QTAE 13598 Score = 38.1 bits (87), Expect(3) = 2e-95 Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 1/61 (1%) Frame = -2 Query: 427 RVVNSSEVIVQNLFK-DAKRDLYVGKNVELSTGEKGRIERTFGQTSKVAITFQDALSPET 485 +V N +I +NLFK D+ ++G V TGE G IE +FG+ K I + ++ E+ Sbjct: 12414 QVHNQDTLIGKNLFKKDSDMTSFIGMKVVFETGETGIIESSFGKGGKTKIQLLNNVAAES 12235 Query: 486 I 486 I Sbjct: 12234 I 12232 >scaffold_25 Length = 142329 Score = 89.7 bits (221), Expect = 5e-18 Identities = 79/317 (24%), Positives = 134/317 (42%), Gaps = 45/317 (14%) Frame = +3 Query: 4 NFNIGLLGHVDSGKTTLAKAL------------------------SSISSTAAFDKNPQS 39 + NI ++GHVD+GK+T L S DK Sbjct: 18474 HINIVVIGHVDAGKSTTTGHLIYKCGGIDKRVIEKYEKEAAEMGKQSFKYAWVMDKLKAE 18653 Query: 40 VERGITLDLGFSGLLVDAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVD 99 ERGIT+D+ + + FT +D PGH I+ +I G D +LV+ Sbjct: 18654 RERGITIDIALWKF---------ETNKYYFTIIDAPGHRDFIKNMITGTSQADCAVLVIA 18806 Query: 100 AQKG-------KQTQTAECLIIGELLQ-KKLIVVINKIDVYPENQRASKLEKLRLRLAKT 151 + G K QT E ++ L K++IV INK+D N ++ +++ + Sbjct: 18807 SPTGEFEAGIAKNGQTREHALLAYTLGVKQMIVAINKMDEKSTNYSKARYDEIVKETSSF 18986 Query: 152 LEATTFGGQ-VPICAVSALQGTHIAE------------LREVLREAYFQPQRNLADPLFM 198 ++ + + V +S G ++ E L E L +A +P+R + PL + Sbjct: 18987 IKKIGYNPEKVSFVPISGWNGDNMLERSTNMPWYTGPTLLEAL-DAIVEPKRPVEKPLRI 19163 Query: 199 YVDHCFGIKGQGTVCTGTLLQGKVQVNNVIELPALGEQRKVKSIQMFRKNVTSASMGDRI 258 + + I G GTV G + G ++ V+ G +VKS++M + + SA GD + Sbjct: 19164 PLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPAGLSTEVKSVEMHHEQLPSAQPGDNV 19343 Query: 259 GLCVTQFNAKLLERGII 275 G V + K ++RG++ Sbjct: 19344 GFNVKNVSVKDIKRGMV 19394 >scaffold_265 Length = 46663 Score = 73.6 bits (179), Expect = 4e-13 Identities = 54/164 (32%), Positives = 81/164 (49%), Gaps = 10/164 (6%) Frame = +1 Query: 6 NIGLLGHVDSGKTTLAKA---------LSSISSTAAFDKNPQSVERGITLDLGFSGLLVD 56 N+G +GHVD GKTTL A L++ S DK+P+ RGIT+ S + + Sbjct: 38758 NVGTIGHVDHGKTTLTAAITKTLSDRGLANFKSYNQIDKSPEERARGITITA--SHIEYE 38931 Query: 57 APAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIG- 115 +P + +DCPGH I+ +I GA +D +LVV A G Q QT E +I+ Sbjct: 38932 SPNR-------HYAHIDCPGHQHYIKNMITGAAQMDGAILVVSAPDGPQEQTREHVILSR 39090 Query: 116 ELLQKKLIVVINKIDVYPENQRASKLEKLRLRLAKTLEATTFGG 159 E+ +IV +NK+D N +E + + + + L F G Sbjct: 39091 EVGIPAIIVFLNKMD----NADPDLVEIVEMEVRELLSKYGFDG 39210 >scaffold_6 Length = 201738 Score = 62.4 bits (150), Expect = 8e-10 Identities = 60/183 (32%), Positives = 89/183 (48%), Gaps = 12/183 (6%) Frame = +1 Query: 7 IGLLGHVDSGKTTLAKALSSISSTAAFDKNPQSVE-RGITLDLGFSGLLVDAPAHLPQ-- 63 I +LGHVD+GKT+L L I +T N Q E RGIT +G S + VDA + Sbjct: 17896 ICILGHVDTGKTSL---LDRIRNT-----NVQGGEARGITQQIGASFIPVDAIKEQTKTF 18051 Query: 64 GEQLQFTF-------VDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGE 116 E+L+ F +D PGH S G+ + DL +LV+D G + QT E + + Sbjct: 18052 AEKLKMDFKLPGLLLIDTPGHESFNNLRSRGSGLCDLAILVIDIMHGLEAQTIESINLLR 18231 Query: 117 LLQKKLIVVINKID-VYPENQRASKLEKLRLRLAKTLEATTFGGQVPICAVSALQGTHI- 174 + + IV +NK+D +Y + K +L + A F +V ++AL G + Sbjct: 18232 MRKTPFIVALNKVDRIYDWKPCVNTDFKESYKLQTRVAAQDFDSKVKE-TIAALAGQELN 18408 Query: 175 AEL 177 AEL Sbjct: 18409 AEL 18417 >scaffold_479 Length = 21072 Score = 57.8 bits (138), Expect = 2e-08 Identities = 71/281 (25%), Positives = 106/281 (37%), Gaps = 26/281 (9%) Frame = +1 Query: 6 NIGLLGHVDSGKTTLAKAL----SSISSTA----AFDKNPQSVERGITLDLGFSGLLVDA 57 N+ ++ HVD GKT+L L +I T D N ERGIT+ + D Sbjct: 11635 NVAIIAHVDHGKTSLVDQLLRQSGAIKETEKDERVMDSNQLEKERGITIMAKCTSF--DY 11808 Query: 58 PAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGEL 117 H + VD PGH + ++D ++L+VDA +G QT L Sbjct: 11809 KNH-------KLNIVDTPGHGDFGGEVERVLSMVDGVVLLVDATEGPMAQTKFVLSKALG 11967 Query: 118 LQKKLIVVINKIDVYPENQRASKLEKLRLRLAKTLEATTFGGQVPICAVSALQG------ 171 K IVVINK+D R ++E L TL A P S QG Sbjct: 11968 AGLKPIVVINKLD--RSTARVDEVENEIFDLFATLGANDEQLNYPTLYASGRQGWAVKNR 12141 Query: 172 ----THIAELREVLREAYFQPQRNLADPLFMYVDHCFGIKGQGTVCTGTLLQGKVQVNNV 227 I L + + + P +P M V + G + TG + GK ++ + Sbjct: 12142 DDDKKDILPLLDTIVDYVSAPNVKPEEPFSMLVTNLESDPFVGRIVTGKVYSGKAKIGSP 12321 Query: 228 IELPALG----EQRKVKSIQMFRKN----VTSASMGDRIGL 260 + + + E+ K+ I R + GD IG+ Sbjct: 12322 LRVVTMSGDVIEEGKITKIFCRRATERIILEEGEAGDIIGI 12444 >scaffold_19 Length = 150554 Score = 56.6 bits (135), Expect = 4e-08 Identities = 55/234 (23%), Positives = 98/234 (41%), Gaps = 26/234 (11%) Frame = -2 Query: 77 HASLIRTIIGGAQII--DLMLLVVDAQKGKQTQTAECLIIGELLQKKLIVVINKIDVYPE 134 H +RT + G D ++ V G E L I L+ + +V+ KID PE Sbjct: 11182 HEKYLRTTLYGLTSTSPDFTMMAVGGNMGPNGMAKEHLGIALSLRIPVFIVVTKIDRAPE 11003 Query: 135 NQRASKLEKLRLRLA----------------KTLEATTFGGQ--VPICAVSALQGTHIAE 176 N +S +E L+ L + A F + VPI VS + G ++ Sbjct: 11002 NVLSSTMEDLKKILKGPGARKLPVVIRNQDDVVVAARNFVSERIVPIFTVSNVTGENLDL 10823 Query: 177 LREVLREAYFQPQRNLAD--PLFMYVDHCFGIKGQGTVCTGTLLQGKVQVNNVIEL--PA 232 LR L + + + P + +D + + G GTV +GT+++G ++ + + + Sbjct: 10822 LRSFLNLLPAKKEWEILSQKPCQLDIDSIWNVSGVGTVVSGTVIKGTIETGDTLLIGPNE 10643 Query: 233 LGE--QRKVKSIQMFRKNVTSASMGDRIGLCVTQFNAKLLERGIITQPGYLKPI 284 +GE Q ++KSI R V G L + + + + +G++ KP+ Sbjct: 10642 IGEFIQTQIKSIHTKRLPVKRVKAGQTASLALKKIKKEQIRKGMVVVHPSTKPV 10481 >scaffold_192 Length = 59409 Score = 53.5 bits (127), Expect = 4e-07 Identities = 51/180 (28%), Positives = 87/180 (48%), Gaps = 35/180 (19%) Frame = +1 Query: 6 NIGLLGHVDSGKTTLAKALSSI-----SSTAA-------------------FDKNPQSVE 41 N+ LGHVD+GK+TL+ ++ + S T A D N + Sbjct: 35266 NLVFLGHVDAGKSTLSGSIMVLTGQVDSHTLAKYEREAKENHRESWIFAYIMDTNEEERT 35445 Query: 42 RGITLDLGFSGLLVDAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQ 101 +G T+++G AH + E+ +FT +D PGH + +I GA D+ +LVV ++ Sbjct: 35446 KGKTVEVG--------RAHF-ETEKKRFTILDAPGHRLYVPNMIVGAAQADVGILVVSSK 35598 Query: 102 KGK------QTQTAECLIIGELL-QKKLIVVINKID---VYPENQRASKL-EKLRLRLAK 150 KG+ QT E + +++ K+L++ +NK+D V +R ++ EKL + L K Sbjct: 35599 KGEFEAGVDGGQTVEHARLAKMIGLKQLVIFVNKMDEPSVQWSKERYDEIVEKLSVHLKK 35778 >scaffold_168 Length = 64553 Score = 52.4 bits (124), Expect = 8e-07 Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 1/113 (0%) Frame = -3 Query: 70 TFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGELLQKKLIVVINKI 129 TF+D PGHA+ G + D+ LL+V G Q QT E + + +++V INK+ Sbjct: 18837 TFMDTPGHAAFATMRERGVSMTDIALLIVAGDDGVQEQTIEAIKAIKKSGSQMVVAINKM 18658 Query: 130 DVYPENQRASKLEKLRLRLAK-TLEATTFGGQVPICAVSALQGTHIAELREVL 181 D + +R LA+ + GG+VP +SA G + +L+E + Sbjct: 18657 D-----KPGIDANLIRYELAEHGVNCEGIGGEVPCVEISAKTGLGVDKLKETI 18514 >scaffold_337 Length = 35213 Score = 49.7 bits (117), Expect = 5e-06 Identities = 65/317 (20%), Positives = 126/317 (39%), Gaps = 45/317 (14%) Frame = -1 Query: 4 NFNIGLLGHVDSGK-TTLAKAL-----------------------SSISSTAAFDKNPQS 39 + N+ ++GHVD+GK TT+ L SS D++ + Sbjct: 15329 HLNMVVIGHVDAGKSTTMGHILFKLGNVDKRTMSKFEHESNRMGKSSFHFAWVLDEHDEE 15150 Query: 40 VERGITLDLGFSGLLVDAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVD 99 ERG+T+D+ + + T +D PGH I +I G D+ +L+++ Sbjct: 15149 RERGVTMDVCVRYF---------ETPHRKITLLDAPGHRDFIPNMISGTTQADVAVLLIN 14997 Query: 100 AQK-----GKQTQTAECLIIGELLQ-KKLIVVINKIDVYPENQRASKLEKLRLRLAKTLE 153 A + + QT E ++ + L +LIV +NK+D+ N+ + + + + L Sbjct: 14996 ANEFEAGFSGEGQTKEHALLAKSLGIMELIVAVNKMDMIEWNK--ERYDYIVDTIKNFLV 14823 Query: 154 ATTFGGQ-VPICAVSALQGTHIAELREVLREAYFQ-------------PQRNLADPLFMY 199 + F + + +S G ++ + ++ ++ +R + P M Sbjct: 14822 SAKFNEKNIRFVPISGYTGENLVDRKDPRLTKWYNGSTLVDYIDSFSVGERLINKPFRMN 14643 Query: 200 VDHCFGIKGQGTVCTGTLLQ-GKVQVNNVIELPALGEQRKVKSIQMFRKNVTSASMGDRI 258 V + +G V G ++ G + V + + + E +K I+ A GD + Sbjct: 14642 VSDVYKSSTKGYVSVGGKIEAGLLGVGDKVLISPGSEVCSIKHIRRNNNESEWAVGGDNV 14463 Query: 259 GLCVTQFNAKLLERGII 275 L + N LL G+I Sbjct: 14462 DLSLVVENPALLRVGVI 14412 >scaffold_516 Length = 18146 Score = 48.5 bits (114), Expect = 1e-05 Identities = 61/261 (23%), Positives = 94/261 (36%), Gaps = 27/261 (10%) Frame = +1 Query: 6 NIGLLGHVDSGKTTLAKALSSISSTAA------------------------FDKNPQSVE 41 N ++ H+D GKTTL+ L S++ T DK E Sbjct: 1384 NFSIIAHIDHGKTTLSTKLLSLTGTLPEKIYGSGEDSLVQKEKNEDRREQYLDKLQVEKE 1563 Query: 42 RGITLDLGFSGLLVDAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQ 101 RGIT+ ++ + G+ +D PGH + LLVVDA Sbjct: 1564 RGITVKAQTCTMIY---RNKEDGKDYLLNLIDTPGHVDFNYEVSRSLMACQGALLVVDAV 1734 Query: 102 KGKQTQTAECLIIGELLQKKLIVVINKIDVYPENQRASKLEKLRLRLAKTLEATTFGGQV 161 +G Q QT + ++I VINKID+ + K E FG Sbjct: 1735 QGVQAQTMANFYLALDAGLEVIPVINKIDLPTADVNRVKQEL----------KDVFGFHP 1884 Query: 162 PICA-VSALQGTHIAELREVLREAYFQPQRNLADPLF--MYVDHCFGIKGQGTVCTGTLL 218 C VSA G I ++ + E P F + D F + +G +C ++ Sbjct: 1885 DDCVLVSAKTGIGIKDILPAVIERIPPPSSEGIKKTFKGLLFDSWFD-RFRGVICLVKVV 2061 Query: 219 QGKVQVNNVIELPALGEQRKV 239 G+++ I G+ +V Sbjct: 2062 DGQIKRGEQIVAAGSGQVYEV 2124 >scaffold_39 Length = 122440 Score = 47.4 bits (111), Expect = 3e-05 Identities = 40/136 (29%), Positives = 57/136 (41%), Gaps = 11/136 (8%) Frame = -1 Query: 6 NIGLLGHVDSGKTTLAKALSSISSTAA---------FDKNPQSVERGITLDLGFSGLLVD 56 NI +L HVD GKTTL+ L S + + D ER IT+ LL Sbjct: 35272 NICILAHVDHGKTTLSDCLISSNGIISPQMAGNLRYLDFLASEQEREITMKASAISLLFQ 35093 Query: 57 APAHLPQGEQLQF--TFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLII 114 + +Q + +D PGH + +I D L++VD +G QT L Sbjct: 35092 KKCEEDETKQDSYLINLIDSPGHVDFSSEVSTAVRITDGSLVLVDVVEGVCIQTHAVLKQ 34913 Query: 115 GELLQKKLIVVINKID 130 + K +V+NKID Sbjct: 34912 AYQEKVKPCLVLNKID 34865 >scaffold_140 Length = 71951 Score = 44.7 bits (104), Expect = 2e-04 Identities = 46/180 (25%), Positives = 71/180 (39%), Gaps = 14/180 (7%) Frame = -1 Query: 6 NIGLLGHVDSGKTTLAKALSSISST--------------AAFDKNPQSVERGITLDLGFS 51 NIG+ H+DSGKTTL + + + A D E+GIT+ Sbjct: 28691 NIGISAHIDSGKTTLTERILYYTGRIKEIHEVRGKDGVGAKMDSMDLEREKGITIQ---- 28524 Query: 52 GLLVDAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAEC 111 A + GE +D PGH + +++D +LV+ G Q+QT Sbjct: 28523 ----SAATYCKWGEN-HINIIDTPGHVDFTIEVERALRVLDGAVLVMCGVSGVQSQTITV 28359 Query: 112 LIIGELLQKKLIVVINKIDVYPENQRASKLEKLRLRLAKTLEATTFGGQVPICAVSALQG 171 +V INK+D N + +E+L+ K L Q+PI + L+G Sbjct: 28358 DRQMRRYNVPRLVFINKLDRLGANP-WNVIEQLK----KKLNLNAVALQIPIGKEANLEG 28194 >scaffold_413 Length = 27503 Score = 40.8 bits (94), Expect = 0.003 Identities = 37/132 (28%), Positives = 55/132 (41%), Gaps = 14/132 (10%) Frame = +2 Query: 13 VDSGKTTLAKALSS----ISSTAAFDKNPQSV-----ERGITLDLGFSGLLVDAPA--HL 61 VD GKTTL+ +L I+ + D S ERGIT+ L + L Sbjct: 12431 VDHGKTTLSDSLIQRAGIIADKVSGDMRYMSCRADEQERGITIKSSSVSLHFEIAKDDEL 12610 Query: 62 PQG---EQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGELL 118 P G + +D PGH + ++ D L+VVD +G QT L Sbjct: 12611 PAGCTSREFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVEGCCVQTETVLRQAVAE 12790 Query: 119 QKKLIVVINKID 130 + K ++ +NK+D Sbjct: 12791 RIKPVLFVNKVD 12826 >scaffold_272 Length = 44938 Score = 38.1 bits (87), Expect = 0.016 Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 7/159 (4%) Frame = +1 Query: 2 PINFNIGLLGHVDSGKTTLAKALSSISS-----TAAFDKNPQSVERGITLDLGFSGLLVD 56 PI N LL +++GKT++ K L + T + S IT L F+ + Sbjct: 13231 PIINNFFLLVRINNGKTSIFKRLVKKAGVVNDGTVVEEDKLNSEINEITTKLQFNSIFFT 13410 Query: 57 APAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECL--II 114 + ++ +D PGH L ++ G +I D L VVD +G + +I Sbjct: 13411 ELS-----KEYYINLIDTPGHLDLKAQVVAGLRITDGSLFVVDGFEGFSFGGESIVRPLI 13575 Query: 115 GELLQKKLIVVINKIDVYPENQRASKLEKLRLRLAKTLE 153 E K + INK+D + + + +LE++ L L K+++ Sbjct: 13576 SE--NNKPTLFINKLDHFFIDPQI-ELEQVYLALDKSVD 13683 >scaffold_202 Length = 57938 Score = 34.7 bits (78), Expect = 0.18 Identities = 17/59 (28%), Positives = 30/59 (50%) Frame = -1 Query: 72 VDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGELLQKKLIVVINKID 130 +D PGH + + + I D+ ++V+DA +G QT + + V+INK+D Sbjct: 48671 LDTPGHPNFLDEVTASLAISDIGVVVIDALEGVMLQTERLIKHAVSEGLAICVIINKVD 48495 >scaffold_285 Length = 43506 Score = 30.8 bits (68), Expect = 2.6 Identities = 24/90 (26%), Positives = 35/90 (38%) Frame = +3 Query: 41 ERGITLDLGFSGLLVDAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDA 100 ERGIT+ A +P + + VD PGH + ++ID + + D Sbjct: 35481 ERGITIGA--------ATVTIPWSDH-RINIVDTPGHVDFTVEVERSVRVIDGSVAIFDG 35633 Query: 101 QKGKQTQTAECLIIGELLQKKLIVVINKID 130 G Q Q+ E I INK+D Sbjct: 35634 VAGVQAQSITVWNQSERYSVPRIAFINKMD 35723 >scaffold_75 Length = 94647 Score = 30.8 bits (68), Expect = 2.6 Identities = 12/22 (54%), Positives = 17/22 (77%) Frame = +1 Query: 6 NIGLLGHVDSGKTTLAKALSSI 27 NIG +GHV GK+T+ KA+S + Sbjct: 73351 NIGTIGHVAHGKSTVVKAISGV 73416 >scaffold_222 Length = 52910 Score = 29.6 bits (65), Expect = 5.9 Identities = 37/166 (22%), Positives = 61/166 (36%), Gaps = 21/166 (12%) Frame = +2 Query: 262 VTQFNAKLLERGI----ITQPGYLKPIYAVCLQ---------------FKPIRYYKEVIK 302 + QFN L+ I I+ YLKPI L+ FKPI YY K Sbjct: 25064 INQFNTIQLKSTIHTISISNDQYLKPIIHNILKVLYSIYKLEFKYSNLFKPIEYYIFFKK 25243 Query: 303 SMRKMHISVGHNTVMANVTL--FRDTDGTTSTFQLDKEYEYMEDVQPAEVQHNDVIYALL 360 R + N ++ N+ ++ + D+ EY + + + H D + Sbjct: 25244 KSRFEQVFTNRNLIIKNIKKPEYQHYRYLFTVINSDRCIEYQKKLVKSASLHTDCQRKRI 25423 Query: 361 QFESPVLSPPHSTLIASKLDMDVHSTSCRLAFWGRIAWQTHSSKYF 406 E+ + S + LI + T C L + ++ +T YF Sbjct: 25424 YIENAIFSSNNLELI-DLMFKYFGDTCCHLYHYLQLITKTEILDYF 25558 >scaffold_336 Length = 35345 Score = 28.9 bits (63), Expect = 10.0 Identities = 27/119 (22%), Positives = 56/119 (47%), Gaps = 10/119 (8%) Frame = -3 Query: 46 LDLGFSGLLVDAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQK--- 102 L G L++++ L G + + G +L+R I ID L ++ ++ Sbjct: 16257 LSYGKMDLIINSDLSLNYGRKYGLIGRNGTGKTTLLRHIASREIGIDNNLSILHVEQEVS 16078 Query: 103 GKQTQTAECLIIGELLQKKLIVVINKIDVYPENQR---ASKLEKLRLRL----AKTLEA 154 G + EC++ ++ + +L+ +I+ P+N+R +S+++ + RL A T EA Sbjct: 16077 GNDSTVIECVLEADVERDRLLKEEKRINSLPDNERLNLSSRIQTIYERLNVIDAHTAEA 15901 >scaffold_60 Length = 105560 Score = 28.9 bits (63), Expect = 10.0 Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 3/39 (7%) Frame = +1 Query: 111 CLIIGELLQKKLIVVINKIDVYPE---NQRASKLEKLRL 146 CL+I E L+K +++VI VYPE NQ+ L LRL Sbjct: 29347 CLLIPEALEK*ILLVIIDHPVYPELFPNQKNKVLVFLRL 29463 Database: genome.fa Posted date: Jan 16, 2009 12:50 PM Number of letters in database: 32,967,507 Number of sequences in database: 799 Lambda K H 0.320 0.136 0.388 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 13,762,138 Number of Sequences: 799 Number of extensions: 170791 Number of successful extensions: 662 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 40 Number of HSP's successfully gapped in prelim test: 14 Number of HSP's that attempted gapping in prelim test: 596 Number of HSP's gapped (non-prelim): 95 length of query: 511 length of database: 10,989,169 effective HSP length: 105 effective length of query: 406 effective length of database: 10,905,274 effective search space: 4427541244 effective search space used: 4427541244 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 63 (28.9 bits)